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XLOC_000741 (gene) - C. hemisphaerica

Overview
NameXLOC_000741
Unique NameXLOC_000741
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000010:1052094..1061179+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000741 ID=XLOC_000741|Name=XLOC_000741|organism=Clytia hemisphaerica|type=gene|length=9086bp|location=Sequence derived from alignment at sc0000010:1052094..1061179+ (Clytia hemisphaerica)
TGAGAAAATAGATTTATTTTGTGTGGCTAGCTGCTCAAGTTCCTCAAGTC ACTGAAGTCAAGCAACGAGGATTTTTGATATCCTTTAATTATGAAGTGTA CTTAGTTTAAAAAATGGAGTTTTTTAATTACCAATCTGTTTATATGGTTT TCTTGGTTTCTTTTTGGCAAGCTCATTTAACATTACAACTTGATTTTGAA TGTACTTACAATGGGACAACACTTGCTGACAACGTCAAAATCTTTCTCGA CTTAGAGGAAAATGGAACATCAAATCTAGTGTGTATGAAAATGCAAAACC AAGGCTTCGTTGAAGAGCTTAAAATGAGTGTTTCCAGCAGTGACACTGAT TTGGTGACTCTAATCTTTAATTCCACATGGACTTCAGAAAAAGTCCTAAA CATTTCTGACCATGATATATTTAAAACTAATAACCCACCGAGTTTCAACA TGAAGATTTTGGTTTGTGAAATATATTACGTCGATGCTTTACATGAAAAT GTTaccataataaaatttttggctGTTACAGCACATAGATCATTCAGTCA ATATCAGAGGACTTTTGGTTTGGATGATTCAAAGCATGTTGTAGCTGAAA GTCCATGTTCTAGCATTGTTTCTTACTGGATACCAAAGATGTTATCGGAA ACGAAAAACTGTAAGAATTGTTTcgtgtcccggggggggggtactaggtt ggTGAGTTTGTGAGGTGATGGGTATGTcagagccaaaaatcgaaaattga agctttgagaGGAACCCGTTTTGGGACCcttaaaaaaatctcaaaaattt tatcgattttcactcgatttttgtcaaaattttgaaaattcacgACCGTT AGAGaggaaatttcagaatttttgaatttcgtgatttttggacCCTTGCA GAGAAtcgattttctttttaatggtgCTTGTACCTCTTTGAGTTTGAGAG ACTTTCAAGGgtgtagtagggggaaatttgttcgttttttttttaaggtc gctcgatttttttagtcaaaacacttgttatacatttttggaaagctaag gggtaggggaatcaaaataactttggtgccaatttttttttcggacaaat atgacggtctaaGGCAAAAATTaaagggtgaaaaattaacgaaaatttta gcttgTGAAAATGGAgatctgttgtatatttttggaaagctctcaaaaaa ttaagattagagatatattgcaagtataggtgatttctgtacctaactcg ataCATTAACcctgtttttcagccagaaacagctgttttgttcagttttt gcgctttcggaagctcaatatctcaagttaggtactgaaatcaccaatat atcactaatcttaatttttcagagctttccaaaaatatacaacagacgtc tctattttctcaagctaaaattttcattatttactGACTGATAATCTTTG CCTGAGACTGTCATATTTGTcgaaaaatcacaccaaagtgtccgaaaaac aattggcacccaagttattttgattcccctattagctttccaaaaatgta taacaagtgctttgactaaaagaATCGAGCGATTGCACAAATTTCCTCCT ACTAGTGTGAAAAAGGGGCCCTTATGGCTCGTACATACCCGgaacccatt ttgcctaagtgccccccccctcccccgagGGCTTTGTACCCGAGGGCTAA AAGTCAtgtaaagaaaattatttcagTTTCATCCAAGATTTTAACCCAAt cgtttttctcaaattttagagcattaaaatgttctttatctCTCCTCTCG CACATTCTAGAATTCTTACATGCCCTTTCGATTCTGACCTTGTTAAAGAT TAAAAATAGTTGGCACACACATTTGTCGATTCCTTTTTCAGCACTTCACT TGAAGATCAGCAAAGAAACACTTCTAATGATACCCATTCTTATGAGTGAA AGCCAAAAGATTTCAGAGAATTCAACGGTAACCCGTTTCGTTGTTATGAA TAATCACATCATTCTGGTAGTTGATAACCAGTGGCTATGGAAAGGAACAT TAGAACTATCTGGGGTGAggaactttttcaaaagttataacCTGATGAGA ACTTAGACTTATACCTTTTACAAATGCTTTCAGAAATCACTTGTGGCATT CTTCTTTAAGAAAAAACGTTGCGTTACTTCTTTGGTTTTCTGGTTAGAAC TCATTCTGACTCATTTTCAAAGCCTTACCTCTCATCAGAGACTTGATCTG ATGGCTTAATGTCTTATCAGAAAACACCCCTAACCGCTTCGCCCATATAG TGACCCGACTCCATATAATGATCTACTTTCTAGCCAATGAGAGTGATGTC TTAAGAGAACAAAATACTGTTGGGTCTTCAAAATGTCCGTTATTTTCAgc atggtttcagccccccagaaatctgaagggcacctatGCCAGGTTAGTAG TAGGGGGCTAATgttttgcaattctttggggttacctattcattaagggt acctagctgtcttgatatgatggaggctctgggggctggttatattttcc aaatcaaatatttcaaaatatttaaaattattgaatttttttaccccagc acctagtttcccatccaatttttctttcgtttcccatCACACCATccttt gctatatttttctaatgtgattgttttgatttacggccgccatctttata gcataacaacaaagctTACCAGCAGGTATTCATGCGTGAGCGCTTCCCAT GCTGAataggggtacctaactcaaagcaatttctcaaggggacctaacTC TTAGGGGGCACCATGCTTCAATGGGGCatctgaaaagtgggctgaaacca tgtttTAATGAGCCCTCTAGCGCTTTTCGTGTGATTGGGGTTTTTTCAAA CTCGTGATTTTACGATTGAAGATTTTAAAGTGCGTGATTGTGTGATCGGA GGAACCGACGTGATGATCAACATGATCgtgatagaaagaaaatttaactc gtgataACGTGACTGGGGGTCTCTTCAATTGGTAGGAAGTAAAGTTCTAa agtaaaattcaaaatccaGTGGTTACCCACAAAATTATAGTGTATTTCGT ATCTGGAATAAATACTCTGTTTACGTTTCTAAGGGTTATTGAAATTCATG GTTTCTTGCTAACCGGGACACATTTCTTCGGTAGGTATGGCTTCCGTCTA GGTCAGGGATGTAAACCTAATTGCTGAAATCTCTATAATTCTAGGATGTG AGAATTACCAAAGCATCATCAAATCGAGTCCAAGTTCATTTGCTAACAAC AACGATTCACTGTCCAATCACTGATACCCCTGGAGTCGAAGGCTCTGAAA CAGCGCTCTTGGTACATCAAATTGGAAATGGCACCTTCCTCAACATTTAC GCGCCGCCCATTGAATCAACGCCCCTTTACATTGTGACTTTGACAAATAT CACTGGTGAAGATATCATAGATGTGAAATATGATTATGGTAAAAGACAAG TTGTCGTACTATTGGTGAGTACTgtaaattttgtcaaatttgacaatttt aaAAATTCGTCAAATTAGCTTAATCGCCAAATTTAAAGGTGCGACCTCAC CAAAATATATCGATGTTGCTCTCtgcaataaaaaagaaaactccagttta ttgccaccgcaggaagcctaaagcttccgaggatggcattcatagcttca cgcataaggaagttgggcaaacatctcataattttgcgcgcgttttNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNggtaacattcttagcttgactgtatttctattgttt tatcatcattaaaaacacttttccggattttttttgatctgattacccat tttcaaagctctatgtctttttttattacctcagggagtcgaattaaggg aaattcctttttttgttggaaaattccctatttaaaccacaagtagttat taaccgctTTGAGCAAtgcaaattagaaatttttatcctttcaaaaactt gtcgtttgactattacagtaaaatggcagtttagtacagtagcgtttagt atgCTATAAACAAACCATAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNTATCTATGAGCTGGACACaaattgctaatatttgta gactagattttgcttcagatgagatgccattctaacagaagtaacggcta taagtaacatttctttccgaattcaacaatttatttgatcgtttttctgc ggtggcactttaatgaaaattatggctagtaaaatcttctattttgaaat ttcaaagaatCCTGTATTCGGTTCTGAGAAGAACTTCCAGTTTAAAAATC GAATTCAAAAACCTCtcatataaaacttactaatcaaattcaaaaaccTC TCATATACAACTTACTAATCGagctaatcaagtttctaaaacttaAGAAC ACAAAGACGAGGGTAACTCTCAGACAGGAATTCTATACACTTTGTGCATT TTCTATATTacaacatatcagaggggatgcgtgcagtcTACAGTCAAAGC AACGAGCAGAAACGTGAAATTAAAATTTAGACTCCGTTCTCTTTTTAGAT TTCATTACTTTCGGCAATCGAATTGATATTtctcgattgtgttcgattac gttcatCAACAAAGTGTCAATCAACTTCTATTTAATTTGTTCATTATTAT TCCTTTTAGGTTACAAATACAGTACACGCATTCTCGTTATCTGGAACACT GCAATGTGCGCCGATAATTTTGAAGGATACACATATTAAAAACCAATCAA GACTTCTCGTAAAGTGCAACCTTCTGTTGATCGTCACAAATGTTAGTACA TTTCTGCCCAgttctgacaaaaggaagtaactgacatttttatgaatttt cattttttagcaaaaatggATTCTTTGGgtcaaaacttaatttttttagc ttggaaaaaagttttttgtgttGTCaatctggaaaaaaaatttgaatata gtAAAGAAGCAACTGACAGGTTTCTGGAGAAtattttctgacaaaaagaa gtTAATGACTGTTTTGCTTCTTTCTGTCAGAAAAAGTCATCACTTTTGTC AGAAATGTTCTTTCAGGAAACTGGTCAGCTACCTCTTTACTGACAAAGCA ACTGTCTTGTTTTTCTCTGCAACAATGAAAATTTGGAGAAAAGCAGTGAT GCTCAAAACTTATCTTCGATGAGTAGAACAATAATCAGTCATTTGTTTTT TGATATGTACAGTACTTTCTGCATCCGATGCCAGCATAAAGCGCGCTTGG TCAATTTTCTCAACTTCAACTTCATGTcagttacttccttttgtcagaaa tGGGCAGATTTCTAATCTTcatgatattttttaattatatatATGCAGCA ATCAGAGTTTAATTAAGATGTGGTGGGGTCAGATAGAATCTAACTTGAAC TTCAAAAGAGCCAAGTCAATACTCAAGAGattattactttttttaaacac cCGACCCCCGTATCAGCCATAACTCGATAGAATCACACTCTCCATAGATA TTCTATCATGCagaatttttaacaaagaaaaatctATAATAACTTTTTAC ATACAAATACTCCACATTTAGGAAATAGTTGTTTGGACATCAACAAATGG TGGATGCAATTGGAAACGACCTATACAATGGAACAACATCCTCCATGCAG ACTTTGAGTTCCATTCTGCCGATACATTGAAATTTACATCTAACATAACA TCAAGTTACGGAACTCCGCTAGAAAGCTATCGGGATTATGATATTTTATG GACCAAAATTGGTTTCTTACGTCCACAAGCAGCATTGAATAACTCTAATT ACATGTTGCTCCTCAATGACAAGATTCCGGAAAGCAATAACCCTTATCTT GATTTAGACATTTTTGCCGTAACAGAAACCGCAGAAGGATTCCAGTTAGA GTTTACGCCAAATGAGACGAAGTTTCCTGAAATTTGGATTGGTTCCTTGG TAAAGCTTGGTGACTACTCATGTCGCGTCACGGCTGTTTTCAACGCTACT GTCGAGATTTATTGCTACAATAGTAGTTTAACATTCACAAACATTATCGA CTTTATCCAGCAACGACGCTGGTTTAGTGTCGATTTCTTTTATGCAAGAA AAGTAGAATGTCACCTTAGTTTTAATGTGAATACCACAACCattgttttt caaaagaaaccagACACGGAAATTGATCACGTGTTTTTTTCAACGCCCCC TCTTCATGCTGGGACAAAGGAAACAAACAGTAGCGTTGCTTGGACTTTCA AAGATCCGCTAACTTCAATACCAAGTTCGTCAAACCAAGTTTGTCTTTAC CAGAAATATAAAACCTTCCAAGAATATATTTATCAGAATCCAACTGATTG TCCAATAACGTTCACAGTAACTGGAATCAACGAATCTTACATACATCTAG ATATTGATGAACATTTGGAAATCTCCGTCAATCTGACCATTGATATGATT GTACCGTTACATGAAGATATAAGCGATCTTGATTGGCTCAAAACACAAGT TTCAAATCATGAAATTGTATGCTTAAGAACACATCGTGAAAAATCGAGGA GAGCTGAGAAAATCCGTCTTCAATTCCATCAATCTTTGGCAATATCAGGC ATCAATGTTGTCACTATCAAATCAACTATTTATAATTCGAAATGTGGTGG ACAAAGTCTAAAATTTCAGATTCTCAATGTTTGTCCTCCAGACAAGAAAG TGATCTTCGAATATCCAAAATCCGTTCAACCAAACGATTTTGCTGACGAT GATCAAAAACAAGACTCAGAAGGGATTATTCGGGTCTTTCATTTACCAAC CAACTATCAACCACCTTCTTCTAAAGGTATTGGTATACCACAAACGCCGC ATGTATATAATGCAGACCCGGCCAAACCAATGTTTCATAAGAAATATCTG GCAAATCAAATCGATCCAGTcttcaaaaaatgtaaagatAAACGAAACAG GTGATTCATATTCTCTATTTTgtattgtacacgttttttttttataagaa cgtcaaaaaatttcgaagccttcggatgttcttagttttttggatttgaa gcctaaaaatgttcttaaaatgttNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCCAAAGCCTtggtat gttcttagaatgttcttaaatttttgggcctcgaagccttatgttcttat atagtttgttcttataaaaaaaacgtgtactgtatTCAGTTGTGAAGGTG GGTGTTGCTTGTGATCTTGTCTATAACacgttttctataagaacaaacta tgttagaacataaggctttgcaGACAAAACATCtcatttcttaggaaaat aaacaaaaatgctCAGAAagtggtaaaaataagaacatgttaagaacatt tttatgcttaaaactaaagaaattaagaacatccgaaggattcaaaaatt ttggatgttcttataaaaaatatgtacttgaagttatatatcaaatttaa aatttggttAAAATGCATTTGTTTGTAATCAAATGGATAACTGCGCTCGT AGTAGTAGAGCCGTCCCTCGATCGAAGACTGACTGTGAAGATTGTAATCT TCCCTGGATCAAAAGATGTTTGCGTGAAAGTTCAGCCTACACTACTCACT TTtgatgatttatttatttttcaggaCGATGTGTGGGTGTACAAAAGCTA TGGAAATTTCTACGAagattagccaatcagattgcatcAAGAAAGTATAT CGTCTTCTGTATCCAGAAAAGTTCATCCCTCGattacttttgcaaaaaaa agctaaaaacaaTACTGCTTTCGATAAGCTGATGCGTTTATCTGAACTCA ATGCCAGAACTGATTATACCCTAACCAATTCAGTTCGAGTCTCAAACGGA GCCGAAGCGGTTAGTATGAAATCAAATACCACCATTGAACTTAAAGGATC GGGATTATATCATTTTCAAGTGGACGTATTTGATAAAAACGTGTCGTATT GTAATTTTGAAACGGAATTTCTAGTCTATGTTGACGGGACACCGCTTCCA AAAGCCGTTGAATCGCTTGTCGAGGCTTTTACCGCTTTtgtttttggttt tattttgttgGGCTTGTTCTTGTACCAATattacaaaaagtaaaaaaata ggaaaaatcaCGCAAAAATGTTTTACTTCAGAAAGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001399TCONS_00001399Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001399-proteinTCONS_00001399-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:1052094..1061179 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.01 0.01 0.01 0.04 0.02 0.01 0.02 0.04 0.02 0.05 0 0.01 0 0 0 0.04 0.16 0.2 0 0 0.14 0.24 0.01 0.04 13.21 12.96 0.03 0 0 0