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XLOC_000713 (gene) - C. hemisphaerica

Overview
NameXLOC_000713
Unique NameXLOC_000713
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000010:24431..35448+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000713 ID=XLOC_000713|Name=XLOC_000713|organism=Clytia hemisphaerica|type=gene|length=11018bp|location=Sequence derived from alignment at sc0000010:24431..35448+ (Clytia hemisphaerica)
TTTTACAGATGAAAAAACAATTGTATCAATGATGCATGATggaaaattaa gtaaaatttaaGAAGTATCATCAATAgtataaaaatggaaaaaccgAAAG AAATGTTTCGCTTTCCTGAGTCTTTTGATGTAAGTGACGATAATTTGGAC AAGGATGGTACAACACCCTCTCCGCTGGACAACCCATCGACGACGCCATC TTTTTTTGTAAGGAATGATGAAGAAAAGGAGAAGACGGAAAGTGCAAATG AGAAAGATCGTAAGACTGAACCTCCTCCTGTTAAACGAGGTAAAAATTCT TTGGGGTTTTTGCTTGTTTACCAAGTCTTTCGATTGTAATACCAACCAAt cctttaaaattaaaaaaagccaaaatatttCTACATAAGTCTCTAACGGC TTCTTCTATACACCTAATCTtatctcaaaatatttatttggtTGATCATT TTTTAGGACGTTCATTGCTGTCTTTCATATCGGATGAGTTGGAAAGAGAT TATTTATTGGAACAAAACGAGAAAAAATTGAAGGAAAGACGGAAGAGAGT CTATACTTTCTTCAAGACACCGCAACATCTTGAAAAAGTAAGAGAAATTG GGCTACTATCGTTCTTATAAGGGTAGCTGTTTCTATGGAAAAATTAACCC ATACATAGCTTTGTAAGTGAAAAGTATCCACTTTCAAAAACAGACCAGTA ATTCCAATGCTTTCGAATCCCCTGAAATTCCTTATTCTTGATCTATGGCT TACCATCAATAATTAAAGGTTtctgttttgattgaaaggtctgatgatgc tgatgtagtaaaaaaaagtgagacaagattagaaaaaaggttctgaaaaa atgaaaatacgttgaataaaaaaacattcttcaaacaaagggactttttt actgatactctttcgaatgtttttatgtttataatagATAGAATGTTTTC TATcttaatcaaaacattcgattgtaaatttgctcgaaatcaactttgct attttttgtttacaattaaGCAATAAAATGTGAGGTCACATAtcgaaaca actttcgatctttcacttgtttgtAGGATATCGTTGCGaaaaaagtagct ttaatttatctaaagacactgcctaaaataagctccATTTATTCCCGTTG AAAACCTTTTAACAGCCGAAATTAATCATTATATTTGACCTTCAGTTTTG AATTTCGAAAGCTTTAAACTTGTTTGTTTTAGAGGTTTTTATAGAGTGGG TATTCAACAACTTtaattgtgtttttctttttcagtttttgttttttggt ttCTTGCTTTGTTTCGATGTCTTCCTCTTCATCTTCACTTTTCTTCCCAT TCGCATCATCATTGGATTGTTGAGAGGATTACGTAATATATTCAAACGCA ACGGAAGGTAAAAGCAACCATTTTCCCCAGTATTTTTCTTTCTGGATTTT TCGACACTTAGGACCTGGCAACACCGCTTTTAAGCAAGTTCCTCatcaaa aaccgggatttttcttTCCGTTTATTGGTGAGTtgcactttgacgatttt ctaaagaaaaaaagcctttttagTGTTCTGCCGACCGCAAATTCGATGTT TCCCTACTGCAAGAGCTTCGAGTTTAAACTGACgtcaaaaatcgaatgtt tagagccccaATTTGGACGTTATTGCGTAGAAAAAAGGGTACATGTCATA TACAtacatgaaataaaaaaatatatgcaCGTGTTTTCACGGGGTAATGG CATTTGCTGCACTACCAAATCCCAACATTCGCTCTTGtcgtaatttttct tcttttatatctAACTGAAAGCGAtatctttttttatcatttcagaaaaa tattgaatcCTGTTCAAAAGGTGGACCTATTAAAAGGTTTGTTGATTCTT TTCACTTGCATTTGTTTTTTTCGCGGTATTGAACGCTTTATTTATCATAA CCTTTCCTGGCCATTGATATTgtcttttttggggaaaatatCTTAGTGCC AGGTATATTGAATAACTTAGCTTTGTTACTCGAGGTATACTCACAACGAC TATCCCTGTTATTGAAAATGAATCCCTTAAACGGTTTAGATTTCCCACAT TTTTTCCACGTATCTAGCCATCCTCCTCAGttaaatacagtagagtctcc ataaatCGAAGATGCACGAGGAactcaaatttgttcgagttagttaagga aatttcgagttatggagactagTTTCGTTAACTGGGAGACCAACAATATT GTTCGAGTTGAGGAGACATTCAAGTAATATAGGTTCCAGTAATGGAGATT CCACTGTCCTTCTCATCTCTCAGcgaatatttcttttatttttcacttta ggCATCATCCTGGTTGTCGTTTCACTGTTTATGCAAAGCATTGATACGTC AGTTATTTATCACGTGGTTCGTGTCCAGTCCGTCATTAAGTTATATGTGG TATACAACATGTTGGATGTAAGTCGTCGCTTTATaagtgattttttgaaa tttaaaaaaaatttctttaaagttcATGGTATTTCCCGGTACAAATAAAC AGATTTCGAAtagttctgttttttttttgtttttttttttgttttttttg tgtgtgtGTCAAGAGATAGTTACTAATAAACAAACACTAATTGGTTAATG TGTTCACGTGCTCAATTTTAGCCAAGCCGGATTAGGGTTTGGTCTAGTTT TAAACTTATGTGCTAATTACACggaatcaaaatattgaaataattattcg tattttacatattttttcacCAGACTTTTCAAGTAGTCTATCAAATATAT ATGGCGATTTTATGATTTCTCCATGCAGCCCTGGCAATTCAGCTTTTTTT GCCGCGGCAAAATGCTCTTTATCAAATTTGCCGAGGCAAAATAGCATTTT GCCtcggcatttttttgtttattgaattttgacttgaaaaactCCTATAC ACCCTATGTCATCCAAAGTACTAGACGTCTCCTACATGATCAgaaaacaa agttaaaaaacTTAAACGATTTGGCACCTTTGaagtttctttgattttat tacCATTTGTCAGAAAATTTACGGCGGCAAATTATGCCGATGCAAACAAG GAATAATCAAATTTACGGCAGCTTTTACCGCGGCATTTGCCTCGTGCCGC GGCCAATTGCCAGGACTGCCATGTTATATGAAAACAGATAAATATGACct tctttttttgtcttttcaagatggcggataaGCTATTAGCCTCGTTCGGT CAAGACGTGTTGGATGCACTCTTTTGGACAGCTACTGAACCACGTGACCG GAGAAGAGAACATATTGGAATCATACCTCACCTTTTGTTGTCTTTCGCCT ATGTCTGTATCCTTTTCATTTGCAACATTTTCACACCCTTTAAATGTGTC GGTCAAAATTAAGTCGGTCAAGCTCCTGAGTCGATgcttgaaaatgtttt gattgaaaCAGTGAACAATCTCTTTACCATAGATGTTTTGAGAATAATGA TAATTTTTCAGAGATGACCCttgcttgttttgtttttaaccaAGCAAGTC AAGATTTTCATTCAGTCCAACTATTCTTTGTTATTGGATTTGATTTCGGT GTTTAACTTCCCCTTTAATTTTTATTCCCCTTAACCAGCCAACCTTTTTA CCAAACAGCTGCACATGTTTTGTTAAACTTATCACAAGCAATCGTACTGA ACGTGGCAATCAactccttcagtaaagctttACTCACTATCATGATATCA AACCAGGTCGGATTCTCTGTGCTAAACTTTATTTTCATGTCTAGTATACT TGTCGCAGTGTGGATCATGGATAATCATGTCTGATTAGGCTCTTTTGGAG ACAATCTTCCAGAATCATTACTGTCAACATTGGGGTATAATTGGGGTTTT ACTTCATCTTTAACttgataaaaaagtttaatACTCCTGATCTATTCTTT CCCAAGAAAgcgtttgaaaaataaagataaatttggtatttttcttcGTC ATTTCAGTTCATAGAAATCAAGTCAAGTGTGTTTAAAAGATTCGAAAAGA ATAACTTGTTCCAAATGTCATGTAGTGGTAAGGGATCTTTCCTAATTTAA TTTATAGGAGTGTATTTCTCAattctattgacctctatgaaacaatctta catctttacaatttatagatcttatcattccattagtttgtcaattctag tttgaatttccctacGCACGGTGCATTTACAACATTGGTTGCCAAACCGT TCCAAGTATCAATGCTCCTATAGTAAAGTGAATTCGTTTGGTATCCTCTA ATGCCGTCTTCAGCGAAATTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNAGATTGTGCTTACGTTGAGGTCGATTTCGAAGAA CGAGTTTCTGACATAGGGAAGATTTATCATAGACATtaagatgtttatat acttccACCATGTCCCGATTTTACGCCGGATCTTGAGCAGGGTAGGTTCA TGACTTGTAAACGTTCTTCATATGAATGGTTTCTATAACCACCGACAAGT CTTGTGGCCCTACCTTGGACACTTTCAATTGCATCAGAGTGTTTGATTAG CCGTGGAGACCAAACTGCTTGCGCGTACTCAAGGTGAGGTttcacaaatg caatgaaaagtgtGCGGAGCATCTCGGGAGAAAGGAAGTCGAAGCTTCTG TTAATCAATCCAACGATCGAGTTAGCCTTCTTGATCTNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCAGCGATCTCG TAAGGATGTGCATGTTGAATGTTCCAGAATTTCCCTAGTGTCAACACGTG ACACTTGTCAGGATGGAATTTCAACAACCAGTCATCAGACCACTTTTCCA TTGCCTCGATATCGTGCTGAAGTCTAATTGCATCTTCAGCGTTCTTTATT TCTTCAACCAGCTTTGTGTCATCGGCAAAGAAGAACATTTTTGAGTTGGT GACTTCAGCTAGATGCTGTAAATAACAAAAAGGAGTGGATCTAAGAAATT TCCTTGTGGTACACCACTATGCACATGATATTTCTTAGATAACTTTCCAT TGACCTTCACATATTGGTAACGATCGGACAAAAATGCTTTCATCCAACCA AGTACCCTTCCTCTGATACCTTACGCTTCGAGTTTTCTTAGTAATCTGCG ATGTGGAACGGTGTCAAAGGCCTTTGCGAAGTCGAAATAGATTACGTCAA CAACCTTATCATTGGATATCGAGTCCGCACATTTGTCTAAGTAGTGTAGT AGTTGGGTTACTGTCGATCGCTTTCCTGATTCTTTGAATAACCAACActa aaataagttaaaattaaaattaactcAAGGAAGAATTCACGCATATGTGA GCAACTTTCTCGCATGCACAGTGGCCCTATTTCGAATTGATATATACCTA TTGAGACCCTTAAAGCGTTAGGAGACTGGGTTATAGTTTACCGAGTATGA TAGACGTGAAATGTTTGTAATATGATAAACAACCAAGTCCGAATATGAGC ATCTTTCTGATCTTTctataaaaattcaagaaagaaaCAAGATGTTATGT AAACAGAATATTTTCTAAATGTTTGCGTCCGTAGGAAGACCAATGTAACA ACTTTAGACATTTGACGCTTCTTCCTAGTAAATTCTAACCCGGTCGTTTC ACGCTTTCATGATTGTTACCAGGTGTATTAGTGAGTAGTTAAGTATGTCC ATTATCGATGCTGACGGAAACGGGAAGTTAATATTCTGCAAAATTTACCG CTGTCACTTACATTAGTAAGTAGACGTGTCGGTTCATTGGAATTGGAATA ATTAAAATTCTTTCTGTTTTTGTAGATGCCAGAGAGAGGTTGCACTATTC GATCATTCTTCTTGTAGTAGCTTTACGTAATTTTGCTGAATATGAATGGA ATATTGGTAGGTTTGATTATGGAATTTTACTTCACTTGCATTTCCTTTCG TTTGATTTACTGAAATACAGTTGAATTTCTCTAATACTATCTTGATGtga ccaaaaattttcttcgaaatggagaaagattcgaatcgCAAAGAGTAATT CaaaccactttccagctgaAGGGACCAATatattagttcgaattacagaa agattcgataaatagaagttcgaattaaagTGAGTTGGCTGTACATACGA TATCTTAATAGTTATCGAATATTCTGGAATAttatataattcaaaatttg ccttgtttttgggtcattttgaatgtccaggggtcaactgatgcttgtcc gggggttgAGATttgttgtccggggggggggggggNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgggggggggggggtaaa tttccaaaaaatgttatatcctccaagGGGATGTCTCCATATTCtaattt tttctggaagggCCCATTGGAGTACACGCCAccttaaaaaataatacaaa ctttttgttttgctttcttTAGAATACGCGTACTCTTCTTTCTTCCCGTT CGCTGCGTTGGTGATTGGTTCTGAATTTCTCGTGGATTGGTTCAAACATG CTTTCATTACCAAATTTAATAATATACAACCTGATGTAAGTTTTTTacga tcttcttctttctttataGAAAAAGATAGTAGGTCTATCGATAGAATTGA GTGATTGATGTTAGATGCCACTGACACTTGCGGTTGGTTTCAAGGCTTAG TTAATTGCCTGctgaagaaatttcaaatagttAGTCTCGACTTTGAAAAA GCATGATTTCCAAACAAGTTTGATAAAAACCCTTGTCACTGTTGGTATTT TTATACTTTAGTaagattgggctattccagaaaaaaattgtaccttTTTG GCACCCACtggatttcttttttcaatttttcaggaccccttGGGTTTTTT TATCTCACTtcttggaccaccctggatttccCTGCACAATTTACTAACCA CTAAGGGAtgcagactatttctggaataccttatcggccaaaacttagtc ggccctaagtgactaaattttggcttggtgactaaaattagggccgacta aaatttgggctgactaaaaatttgggccaatttaaaagtttataattaag ctttccttaaccAACTTTTTTGAATATCACATCATTACGTCCGCTACAAT TCATCATTTTGTCCGCTATTACTCATTATATATTAGTTGGCcattagtga ctaaattttgacgaggtgactaaaattagggccgactaaaattaaggtcg actaaaattaaggccgactaagttttggccgataaggtagccACTTTGAC CAGTCGTCATTGAAGAGTTCGTCAAGTTGATCTTATCTAAGTCTTAAAAG TTGACTTAAACTGAAAATCTTTCTCTTTCAGATTTATCTGACGTATCGAA AATTTTTAGCGAAGAACATCCTCTCAAGTCGAGATGATttggtaaaaata attttaattgtcGACTTGAAAATATATCTAATCTGATTGACTTAGGGAGA AGCCActactcgttatttttttcttttgcgtACAAAGATTTTACCCTATT ATACTCATCGTAAGAATATTTAAGGAGTGGAGGCCAAGTAACGCCCATTA TCCTTTGCTCAGCTATCGGTATCTAGACTATATTTACTTAGACGGAgaag ttaattctttttattCTTGTTCAGGTTTTCACAGGACATACAGACCAAGT CTCAAGAAGAATGGGATTCACTGCACTTCCCTTAGCCATTCTGGTGAGTC TCTTACGCTAAGTATctgacaatagaccttttcataaattacgtcacgga catcacttgcctcgttttgaaattattaccatggtgattaactgCAAGTG GATTTTAGTTAAACTACTTccaattcataaaaaaatcatttaatgtctca agggacataattaccatggtaattgtttgaatacgaggcgagtgatgttc gtgacgtaatttatgaaaaggtctatttgatctgtttataaaaaaactaa attatTTCTACTTTCCACACAATATTACTTTAGATTTTAATTCTTAATTC CTTCCTCGGGACACTCGTATGTTTTGTGGTATGTTAGCTTTGTCACAAAA ACATCCTCCAAAAATAACTTAAAGCCATGTAAAGAATTTTGTTAAAACGG CTTAAATTCTGATAACGGTTTAAGCggttcaaaaaaaatgtttaatgctg ttggttttgaatgttttagaTCCTGATCAGTTTAGCATGTTTGTTTCACG AAAGAAATTGTCATATGACGCTTCTCACAAATTTCTGACATGCTTATGTT GTCACGCGTGTTTTTTGCTGTTGTATTACTCATATATAGTATTGAGAGTT GATTCAAGGTTAAAATTTGATAGTCCTTTGTGTGCGAACAGCAAATGTCC GAAAACCACGACCACAACCAGGGCCTCAATTCCATTCCAATTCATTGCTA TTCACCCGCAGTAAAATTCTCCGAGCAGATTCCGATACTTCGCGCATGGC ACGCATTTACTCTAAGGGCCAGGTTGGCGCACCGCTTTGATCTTTTTTAT CCAGATTTGAGAtcaatattaaatgagcttgcTAGCTCGGTGATtggtca aaacaaaacaatcgtACCAAAATCAAACCCCAGTTAAAACATAAACATTG AACCCAGTCATTTTCgatttcgctttcgttttcaagcaaagagcTACGCG GTTTTGAATGGGTTGCCTAAACAACCAGGTCCTATCATTTAGAGCAGAGC GTAGTACGTGCAGAAGGAACGNGTTGCCTAAACAACCAGGTCCTATAATT TAGAGCAGAGCGTAGTACGTGCAGAAGGAacgatctgttatgagattaaa TTCCGACATAATATTTTGTCAGTCTCTTATTGGTAGGTCTTCTTCTGTGA TGTGAATTACCCTCATTTTTTTCTTGAGCCATTCTCCAAAAATTGCGACA TTCATATAATCATATCATCACCATAAACACTTTTTTACGTGTGATCGTGT TACATTAAAAAGGCTCAGATCCTGTTTTGCCAATTGCTAGGTGAATCTTA AAGGCTAAAGGCGATTTAGATCTCTCAATTTAATgcaattttctgttttt gtgaTGTAACAAAGCCAAATCTCCTTTCAGTTCGCTGCTAAAAAAGCCAC CAAAGTGGACGTTTTTAAAAGCTGAtgtatttttggatttttcgaAGCTC CTGAGGGTTAGTGCTAAACTTTTTTGTCTCTCTTTTTTTACAGTTGATCA AAGTAGTTGGACAGTGTGTGTCATTAAATGGAATCAATGGATTGTGTTTC GCATTCTCTGGTTATCTATGGTAAGCACTTGTTAATCTTCAAATGAAAac taattcatttttcattttcagaaagTGCAATTTGACGACTACTGAatcaa attttggatttttttttaaatcataccCCGAATTTAAGATTAACTATATG GGCAAATATTATgacattttacttttttctcaGCACCCagtaatgggcca ttccattttatatctatACAGTTTCTCAAATTTTTCCAGGGAGTGAAAAA TTATTCCAAATCTTCCTGAGGCTAAAAGACTAGTTTTAGTTCGTTCACCC TCACTTTTAATGTATGAAGAagattttttcaaggttttttgcaAGTTCTG CCATTTCCCAGGAGGTATGGACGCTTTTTCATGAACCTTTTCTTGAACAG CCCAATGCTTACGTGTTAAAAAGTCATGCACATTTGGGGTTACAAATCTG TGTTCAGATTTTCTCATATTTCTCTTAGATAAAGATTGCATCCCTGTGAA GTAAACCGATTTTGGCTATTTTGAGTCTTTTTGACTCTTTTTGACTATAT TTGTCCTGCTTCACAGAGCTGTAACGTTTCATTTAAGAAAGATAAGAAAA GTCTGAACACAGATTTGAAGTCTTAACGAGATTTAAATAAACATTTAAGA CTTTGGTATTCCTTTTTAATTTAACGATTTAGCAAAAGGTTCAAATCTTC AAAACTCTTGACAATAAAAAgtctttccttttttctttcagtcTTTGCGC TTTGAAACTACTGGTCAGCATTACTGTATTCGGAAAAGCGTCAGAGTACA TCAAAGATGATGTCACCCCCGTTCTGGATGCCAACACGGTTCGAAGCCCT AATGACCCAACAGAAAGTAATGACAAAATATTCAAACAGAGTTGGTCGTT TGAACCTTTGAACAGTGTACAAGATATTTACGGAGGGTTTAATAGTAATA CGAAAATATTTACCGGTCGTTGACTGGCTGTTGTGGATATGCAAATCGGG AGGATTTTTTTGTATCATAAACTGTTAACTTTTTTCATGTAGATAGTTTT CGATGTTGAAATATTCGATACTCTACTGGGTGTTGAAGCAGAATCGTTAA GTTGGATGTCTTGAAATAATCTTGAAGTCTTGCCAAGTTTCACTTATGAC GATAATTTACACGAAAACACTTACACAATTTGTCCTTTTCACGCTTTTAG ACAGATTTAGTAACTCTTAtgttctttatattttcttagaTCAAAGATTT GTAAATTATTTTAGGTAGGGTAATTTTTGAACTAAAAAGAAAGCATCGAA ACTGATAATTCATTTAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001309TCONS_00001309Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001309-proteinTCONS_00001309-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:24431..35448 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TAPT1transmembrane anterior posterior transformation protein 1 homolog Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
37.96 37.96 15.79 10.87 10.29 8.2 13.19 11.72 13.93 14.41 15.87 13.7 10.06 11.51 9.91 10.99 10.18 12.32 4.47 5.77 10.17 11.48 30.41 25.52 15.21 12.84 5.82 5.92 14.23 16.38