XLOC_000672 (gene) - C. hemisphaerica

Overview
NameXLOC_000672
Unique NameXLOC_000672
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000007:1414730..1417874-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000672 ID=XLOC_000672|Name=XLOC_000672|organism=Clytia hemisphaerica|type=gene|length=3145bp|location=Sequence derived from alignment at sc0000007:1414730..1417874- (Clytia hemisphaerica)
TTTAGATCTCGGGAAAGTTCACTTTAATAAAGAGAGAAACTTTTTTGTGG
CGCACCCAGTAGGAAATTTTCAGTTTTCGGTTTTTAGTTATATAGCTAAG
TAAGTCGGCTAAGTATTCTTTCTAAATCGTTATTTTTAGAGAATCATGTG
GTGAAAAAACCATTAAACGTTTGGTGGAAGACGCTCATAGATATGGAATT
GAAAAGGTGCATTGCTACGATGAACCCTTGTAAGAATAATTTATTTTTTA
AGGATTGAGATTTTTAGAAAAGTTTTTCAGAATATAAAAAACTAATTTTA
TTCATCTGAGAACAAGCCATTCTCCAAAACCTTTTATTGAAATGTTCTCT
CTACTTGCGTTTGTTTGTTGATTAGCATTCTGGGTCCTCTTTAGGAGGGT
GAACTGTATTAAAGTTATTTTTGTGCACATCCGATAATACTTTTAATAGT
CACCTTTTTTATCTACCCTTGAAAATATGGAGAAAAAAACACTGCTTCAT
TTTCTCGTAGGATGGTAAAAAGTGTATTATGTGCGAAATACCCAGATGCT
AGAGAGTGCCAGCCGGTCAACGCAAGTAAAGTCGAAAGGTATTGTTTTCT
TTCCTTCATTCTTTATCTTTATTGTTTTTTCTTCGAAAATTTTCTCCCGG
CAAAGATGTTTCTTGAAAAACAGGAAGATATTAGGCTACGTCATATCTTC
CATCATTTCGAGCGTAAAACTCCAACTCTTTCAGATATGAGCACTGCTCT
TGTTTTGAATATTTAATTTCTCCGAATACATCACATGTGCACTGAGGTTT
TGATGAAANGCACTTTTTGAAAGTTACTTTTTAAATCAAGCGAGCATAAC
TTTTGATCTAATAAACCAAATTTAATAAATGATCCATCAAAATTAATCTT
CCTTCTTTACGATGAAAAAAGATTCGTTCTTTCAAAAATTTTAGATCTCG
GGAAAGTTCACTTTAATAAAGAGAGAAACTTTTTTGTGGCGCACCCGGTA
GGAAATTTTCAGTTTTCGGTTTTAGTTATATAGCTAAGTAAGTCGGCTAA
GTATTCTTTCTAAATCTTTATTTTTAGAGAATCATGTGGTGAAAAAACCA
TTAAACGTTTGGTGGAAGACGCTCATAGATATGGAATTGAAAAGGTGCAT
TGCTACGATGAACCCTTGTAAGAATAATTTATTTTTTAAGGATTGAGATT
TTTAGAAAAGTTTTTCAGAATATAAAAAACTAATTTTATTCATCTGAGAA
CAAGCCATTCTCCAAAACCTTTTATTGAAATGTTCTCCCTACTTGCGTTT
GTTTGTTGATTAGCATTCTGGGTCCTCTTTAGGAGGGTGAACTGTATTAA
AGTTATTTTTGTGCACATCCGATAATACTTTTAATAGTCACCTTTTTTAT
CTACCCTTGAAAATATGGAGAAAAAAACACTGCTTCATTTTCTCGTAGGA
TGGTAAAAAGTGTATTATGTGCGAAATACCCAGATGCTAGAGAGTGCCAG
CCGGTCAACGCAAGTAAAGTCGAAAGGTATTGTTTTCTTTCCTTCATTCT
TTATCTTTATTGTTTTTTCTTCGAAAATTTTCTCCCGGCAAAGATGTTTC
TTGAAAAAACAGGAAGATATGAGATAAATCTTTCACCAAAAATTTGATTA
TGGTCTTGTTGTTCCAAATCAAAGTTTTTTTTATTTGAAACCCTTTTGTC
TCATTATCTTTTCCTTGGGCGAAAGTAAACGCTCTTGATATTCCTTCTTC
AGAACATTGGTTTTTTAAATAAAGCCAATAGAAATCTTAACACGCCAGAA
ATTGATAATTGAATATAACTGAATCTAAACAGAGAATAGAATTGAAGAGC
AAGAGTGGTTTTAGATTGGAGATAAAAAATATGAATTTGTAGATATTCAT
ACAGCTGCATAAGTTGTCATTGCACCTTGGAGAATAGATAACCATCTATT
TTAAATCACCTTTTTTTTAACATAATGGTTATCACAAAAAACCTCTGAAA
TTCGCTTGCCAAAAGTTTTTCTGCTCTAAATCCAAAAATACATTAAAACT
GATGAAAACTGTGTTGCTAATTTGATTCCCTTGGAAAATAAAACAATAAC
AAGATCTCTCTGCTTTTTCAAAAATTATTGGTGAATCTTGATCATTCTAT
ATAACAAAGCATCTGGTATTTACTCTAACCTCTTTTCAATTTACAGCTGG
AAAGAAGCGACCATAGCCCTGATTGCTGTTTCGTGTGTTTTATTCATCGC
TGTCATCCTTCTCCTCGTCTTGTACAATCGACGAAGAATGGATTCGTCTA
CCTACAAACGAGACATCGATACATAGAGACATCCATCCATCTTTGATATT
GGTTGATATTTGTTTTGTTGACGAACGGTTGAAATTACACCTGATTTTGA
ATGCGGGTGATGCCGGGGAATATAAAGCATACGTGGCTATAGATTGATCT
TCATTTGGTAGCACTATTACTGGCATTTTACAGAACCTTTTTTTAATCAT
CACAACCCCGCCTTAAAACATGCTATTCTTATAGGTTTAACGAACTAACG
TTATTAAATCAACTACCATTTGTCAAAGACTTTCTTTTTACGATTTTACG
TTTTTGAAAGAAAAATTACAACATGTTTTGAGGGGTTGTGTGTGTGTGTT
TCAAGGGTACTCAAAAAAACAAAACTGAAAATGCCAAACTTTCGCACTAC
AAACGATGCATTTCATTGTTTTTATTCTTGTTCAGTTATTACTTTATTTC
ATCCATTAAATTAACCTTTTGTTTTGTAAATTTATTTTTCTATTATGGTT
TTATACAACATAGCTTTTTTTTACGATTGAGGAATACTACTTTAAGTCAT
GTAATTATTTGTAATTTTGTCTGAAAATTTTATATTAGATAAATTTAATT
TACGAAAATCTTTAAGAATACAAAAAATTAAGTATTTTCACTAAATAACT
TTTAATTAACCTTTTGTTTTATAAATTTATTTTTCTATTATGGTTTTTAT
ACAACAGTTTCTTTTTTACGATTGAGGAATACTACTTTAAGTCATGTAAT
TATTTGTAATTTTGTCTTAAAATTTTATATTAGATAAATTTAATTTACGA
AAATCTTTAAGAATACAAAAAATTAAGTATTTTCACTAAATAACT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001268TCONS_00001268Clytia hemisphaericatranscript
TCONS_00001267TCONS_00001267Clytia hemisphaericatranscript
TCONS_00001266TCONS_00001266Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001267-proteinTCONS_00001267-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:1414730..1417874 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.32	1.75	0.69	0.79	13.66	12.17	11.15	11.71	17.56	18.22	21.8	15.26	33.51	33.26	64.34	58.72	37.93	27.35	42.11	42.78	19.62	18.98	20.63	20.59	23.83	31.82	19.89	17.7	32.95	24.37