XLOC_000641 (gene) - C. hemisphaerica

Overview
NameXLOC_000641
Unique NameXLOC_000641
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000007:716277..721749-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000641 ID=XLOC_000641|Name=XLOC_000641|organism=Clytia hemisphaerica|type=gene|length=5473bp|location=Sequence derived from alignment at sc0000007:716277..721749- (Clytia hemisphaerica)
CGCTTTGATTCATGCAAGGACAAAGGTAGTTGCCAAGTTTGCATGAAGGT AAGTTTATTTTATATTCTCATTAAGGCTTTCCCCTCACGAACTGACATAT TAAAGTTTTTTTCTGGAAAGTTCCATGTAGATAATTATGTAGAAGGATAT AACATGTGTAATTTTCATACTCTGACTCATCAATATATCAGTAGTAGTGT CTCCAATATTCTTTATCGGTTCTTTGAAGGTCTTACTTTGCCTTACGTTC TACGTTTAATGCATTTAAACAGATTGTAAAAGATTTTGTTCTTGCAAAAA CCCTAAATCCAAAAACCCCTCGTTGAGATTACTGTAAACAAAGTTTGGCC AGAATTTCATCATAAATTGCTTTGTGAATAAACATTGTTTTTGAATGAAT GGAATTTTAAAGAAAATTCTAGGGCCGTTGAAATTTATTTTAAATTTCGA TCGAACAACTTCTTTAAGCTGTAACACAAACAAGAGTTTAAAGCCTACGC ACGGAAACACGAAACAAAAACCTAACCAAACCAAACCTTGACGCCCCCAC CCCATTTCCTTATGATGGTTTTATTACAATCTTTAACCATAATTAGCTGA TTGTAATTTTCTTTTAACGTTGGGTCTTTAAATTACTATATCACTTTAAT TTTGCAAAATGTACTTAATTAGCAGTTGCTAATTGTTTTGGTTGTTCTTA CTATAAAAGACGAAGACAAACATTATACTTATTCAGATTTGAAGGATTAG AGTGAAATTAATTAAGTTTGAAGCATTTTAGACGCCTTAAAATCTGTCTG AAACTCTTTTCGTGCAAGATCAAGATTTCCGTTACGACAGACAGACATAT GTCAGATTACTCAATATAGCGTTTCCGACATCTTTACTTTTTGTCAATGA CAAATTCTGTTTTTGAATGATAAGGACTTGTCATGGCTATTGTGAAGCCT TTGTTAAAATGTATGGAGTCATGTAGTGTTCTTTTTAGGTAAATTTAGAA TAGCTTGTAGGAGTCTAGCCGCTTTCTCTGAAAATAAACTGGACTGGCTC GTGTAGCCCACTCAACTAACAGAGTCGCTTTCAGGCTACATAGCAACTGA ATAACCCTATCATTTCTTTTTGAAGACTCAATTCGAAGTTTCATAAAATT GACAATGGCCAAGATCCGAAACTGAAATACTTACTGGGATGAAATTTATA AGCCGTGCTCTCTCTCGAAAAAGTTGCATGGAACTGTATAGTAAGCTGAT ATCAAATGTTTTAGATTTGACAGGCCTGCCCGACTTATTTTAGCTGTGTG AATATTTATGAAATTCGAGAGGAGGTTTGAAAAGTGAGACGGGAAAACTT GGTGGTCGATATCATACCACTATTTTAGATTTTACCATATTTGTCAAAAT AAAAGAAACTGCTTACTTTTGTTGTTTGTAGTAGTATAGAATTTACAACA TGAGACTTTCATCTGTTTATCATGCTCAGCTACACCTCCTTCATGTGGAG TTGAACCTTTATATAGTTTTCTAATGGGGAGTGTATCAATCGAATTTCAT TCCCTGCTATCTTTTGTCTAAACAACTCTGTTGGTAAGCTTTGTGCTGTG CTGGAGTGTAGGATGGAAGAACGCGAAGGTTGTCCTTTCACCATTATCCT TTCTCAAACCCCAAAAACAAAATATTTCATTTTATTTATCATCCTTTTTC TTGGCAATACTTTGAAAGTTTATCAAACTCCGGAAAAGCCACTTTAAGCC CTATCATCAAGAGCACCCATTGTATTTTATTGAGCAAGAATTTTTCTTTT CAAGTATTCTTGTCTAAAGTTATGATGGTTTTTCCTAGATGACGTTTTTA CAACTTCTCAAGCAACGTAATAGACGACGTAATACAACATTTTTGATTTC TTTCCCATCATAATACAAGATCGTCGTGAATTCGATTATGTATTTAGTCC ACATTCTTTCCCTAGCAAGAGCGAATAATTAAGATNTTCTTTTCCATCAT AATACAAGATGGTCGTAAATTCGATTATGTATTTAGTCCACTTTCTTTCC CTAGCAAGAGCGAATAATGAAGAATAATGATTATTTAGCAGTAATTTCTC CTCAATTATTTTATGGATTATTATGTAATGTCGCAATATTAACTCTCACT ACAATTCTCACAAAACCTTGACTTCCTGTCACAACAACCTTGTGTCTCCA AATGTTTTATTTTTACAGCTTTTCCGAGATAAGGATTTAGCTGCTTTCCT TTGAACCTGTATTGAACTCAGTTATTTGTTGTATTCAAGTATTCTTATCC GAATTCGCTACAAATCCAGTGAGAAAATCACTGCTAAATATACTTTTTCT CAAACAACTTAAAAGGTTGACCTTGCCTTGTTACTTTGACAGGTCTTTGC ATGTTTTAGCCACCAGTTTTGAATGTTGTCAATAAAAGAAATGTCTTTGT AGTTACCACAAACGACTTGTGATCGCCAACATCAATTTGAAAAACATGCT CTATAGACGTTTGCGAATAATTAAATTGTTGGAAATGATTGATTGTTTAT AAGTTTGAAGATTCTTTGTCGAACCGCAAAAGCCATTTTAATTAAAAACT TCTGCTCCCGATGCCAAGAATTTTTCTGATGTTTAGAAAAGTCCAGAAAT TTCATTGGTAGCATTATTCATTTAGTGATATGATATTCTTTGCAAATTCA TCGCTGTTAGAAAAGTAGACGTAAAAAAGATTAGAGCATCGAAAGTGTCA ATCTCAGCGATTTTGTTTTCTTTCCGGTCCTTGAATTATCACTATCTGCA TTTTCTGTGATTTTGCTTTGTTTGCGCGAATTATTCTGCTTTAAGCCATA GATTTTGCTTTGTTAAGTCACAGAATTGATTTAAGATTCTAGCAAGATTT TTAAAACATTGATCCTAAGAATCCAAACTTGTTTTTTGTCTCTGTGATGT CACTTTCCAAAGACGCGGTATATAAAGGAAGGAATATTTGATTCTAAGAA ACGGATTTGATGATCCTTATTCTATGGAAAATTTCCAGAACAACAACTTG AAATCTTTTTCTCTTGAGTTTTGTTTATGCATACAAAGCTTTACATAATA ACAGAGTTGCATTTTTAGCTTGCAATGCCAACTCAGCATTAGATTCAACA ATGTAGTAGGGTCGTTCTAAAATTGGCTGAGTTTTGCATTAGATAAAGTG AACCCGCATTTTCTGATAATCTATCGCAGATAATCTTGATCAAAAGACTT TTTTTCGATCAACTTAATTTTGTAAGCCTCTTTGTTGTATGGAAAGACAA ATGAGTAAATGACGAATGTAATTTTCCGTCACTGTTACATCACAATCGTT CGACCGCTAGACCAATATGGCGGTCAGAGCAGCGATTGTCGTAACTTGTA GTACGTGAAAGGGTTGAGGAGAATGGAGTTTTTATTGACGTCTTTTCAAA TGAAAAAGTAATGATATCAAAATGTTATGTTGTGAAAGTTTTATTAAGAA AAAAAGTTTAGTCAAAAATAGCGCTTGGAACTGTGATTTGCGTAAATTTA TCTTGAACTTTGTTAAGATTAAAGTTATATGTTTTGTGTCAAAAGTCATG ACGCTTTTAAGCAGGGGACAAATTTGAAAATTATCGCTTTAAAGTTTCTG TTGATGTTCACATTAACTTGATGCTTAAATCAACATAGCGAACAAGGTTA TTTGCCGAATAGCAAAAAGCACGATCGGCTGTAGCTTTTTCACAGGACCC TCACAAGAAACCAATAACAATAAAAATGTATTTGGCTTCATGGCGAAGCA AGACAAAAAACATGTAATGTTGATCCATTGTCTTCGGAAAAAAAAGTAAT TAAAACCCCCTTAATTTATCCTTCATCATTTCATAAGAGAATTTCCCCCG TGTTTCGTTTCGATCGTCTTTTTTGATTGACAGCTCGCGATGTCAATTAA GAATGATGTCATTTTGATGTGATGAGGGAATAAAGAGATTGTACGTATAT AAAAACTGTGTTACAACAAGCTCCTCATTTTATTTACAAGGAAGCACAAG TACAGAGAAGACGTGGTGAAAAATAACATTTATATAACCAAGTGAAAGTA GAGAAGGAAAATTTTTGATCAACATGTACGATCATAAGAAGTTGAGCAAT CAACTAGAAACTTTATCCAATAATAATATGAACGCAAAGAAACCCATTCG AATTGTGGTTCTTGGACAGTGTGGTGTTGGGAAAACAGGTACGTTCAATT CCTTACTTTTCTTCACATACTTGATTCTTTGTTTTTAAGTTCTCTATTAA TGATTTACTTTTCATTCAGCTTCTTCGAGTTTTGTCAGATGATCTTATTT TTATTTTTATTTTGTTCCTGCTTTGAAAATTGCTTGATTCAAGTACTGTA TTATCTTTTGACTAGACCTTTCATGAGTGGAATTTCAATGGCAAGTCTTT GGCCTTAGCTTTCATAAATTGGAGTACCCAGGTTTACAGACCTTTTTTGA AATTGAATTTATTTTTCGTTCATTTTAGCATTGGTTTCGAGATGTTTACA AAATACGTTTCCACAAGACTCTTCATCGGGTAAAGACATTTCACATCGAT ACAACATGACAATCAATAAAAAGAAAACCGTTTGTCTCGATATTGTCGAT TTCAACGATAAAAACGACGCACTTATCAGTTGTGCAGATGCTTTTATTAT TTGTTACGCGATAAACGATCGAAAAAGTTTCGAAGCTATCGATGCTTATT TGGACAAAATTGTCGAGGCTAATATAAAAAGTCCTAAAATTGGAATTGTT GGAAATAAAATTGACTTGTATAATGATAGAGAGGTAGCGTCAACAGAAGG ACTCGAACTAGCGAAAGAAATTAACAGTCTATTTTATGAAACGTCAGCTA AAGTTCCCGTTATAGATGTGCGTCAAGTGTTTTATGATTTATATCAATCT TTAAAGAACGCTAAACGATCCAAGAAAGGTAAAAGAGGAAGTATTGAACT TGAATCTTCAGACGTTTTCAGTCTACTGAACTATTCCATTATTAATAATT CGGGCGTCATTGGGCGGTCATCAAACAGCAGTTGTTTCTCAGCTTTACTT AGCGCCCGAAGGAAAAAGTCGCCGCCACCATTATTTGGACGAAGCTGGTC GTCAGAAAGTGTTTAATTGTTAATTGGTTGATTTTCTGATTTAAACGGTC ATGTTTTGGCAATTGCTTAGCAGACTGACTGTCTATCAAAATAATTACAC ATACATAACCTTCTAACCTTGATTTTGTTTTGATTTGTTCCAATTTGAGG ATGGTTACCTAATATATCTTTTTTTGTTTTTGTTGATTTTTAAATTTAAA AAAGAAATATAGAATTTTATTAACGGTTTATAAAAGACATTTAATTTTTT GTGTAAATAACAGAGTTAATATTTATTTATCGGTATTTTATATATATATA TTCACGAAGAAATAAAAAGACAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001180TCONS_00001180Clytia hemisphaericatranscript
TCONS_00001179TCONS_00001179Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001180-proteinTCONS_00001180-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:716277..721749 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RASL11Aras-like protein family member 11A Homo Sapiens
RERGras-related and estrogen-regulated growth inhibitor isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.12 5.71 3.07 3.6 4.87 3.93 3.53 4.35 10.78 12.33 11.57 18.43 22.99 12.9 11.55 11.84 14.18 16.6 36.91 34.76 11.77 10.94 44.24 37.89 5.62 14.19 38.64 28.18 47.72 43.02