XLOC_000628 (gene) - C. hemisphaerica

Overview
NameXLOC_000628
Unique NameXLOC_000628
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000007:424678..429838-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000628 ID=XLOC_000628|Name=XLOC_000628|organism=Clytia hemisphaerica|type=gene|length=5161bp|location=Sequence derived from alignment at sc0000007:424678..429838- (Clytia hemisphaerica)
TACTGTCAATCCTTTCAAAAGATGACTTGATAATTTTTGACCTCTGTTTG TCTGTACGTCGAGGTTTTATATTCTGTTTGGTTTTTCTATCAAAGATTGA TGTGATAATAGTGTTTTGTTGTCAGTGCAAAAATTAATATTGCTTTATGA TGTCAACATAGTTGTGAAGATGATTCATGACTTTTCTCTGCTCAGAGGAT ATTACAGAAAATTACTCTTCTATTGTTTGGATTATGTTAGTTCATTGACG TTGTCATGAAGTTATTTTGCCAATGAACTCTGAATGTTATTTCTGCTTTA GATTTAAAGTACACATGGAGTGTTTGTATAAGTTCGTGAACTCACCCTTA TCAACATAGAGTGAATAATTGGTTCGTCGAAAACACTTTGCTACAAAAAC ATATCATCGTTTGAGTATTAAAAGATTGCAACTGTCATTAAATCTGAAGG CTGGTTCCATTTCTTATCTTGTTTTTGTTCTTTCATTTTAGCTTTGTAAA TATCTTTCTAGACGCTCAACACAAAAACTGATAACATCATTATATTGAGT GGTTATGTTGGACTTGTAGTGGCTTACTGTCAATTTCACTGGAAAATTAT ATTAAAGACTTTTAACAGATAATACTTAGACATGAATTTGAACTTTTTAA CAATTTTGGTTTGTTTGGCAGCCTGTAGCTATGGCATGGAGATAACGAAT TGGGATCAAGTACGGAATAACCTGCATCGAAAATTAGAGGAGATTTATGA GCGTGATCATGATTTTGTTAAAAAAACTGTTGAAGTAGGAAAATATTTCA AATACTTTGTGACGTCACTGGATAGTGGAGAATATCAGGTACGAACAAAC TTTCTTGTTCTTTTTTTTGCAAGTGAAGTAATTTACTATTCTTGAATAGA TATCCATTGAATGTTTAATGAAAATGAACCCAGTATGATCCCAAACGTTT CAATGTTATCTTTTCAATTATTGATGATCTTTCCTCATCAATGTTTGATA GATTCTTTCTTCTTTGCTTCATTAAAGCACTAAACAAAACTCTTTTCACT CAAAAGGAAATTCTCGGGCGAAAATCATTCAAAATTATTTGCTATCAGCA AGTAGAAATGGGCAAATACAGAAACTAATTGGGGAGAAAAAAAGAAATGA AATGAACAGTTCTTTTCAGAATCAAAATTTCATTATGTTGGTCCCATTTC CATATATTAGACCTAATTTTAATAATCATTTCATTTTGCCTCCTTCTGTT GGAGCTAATAAAAAATTCTTTAATTTCATTCTGAACAGTGAGGGAACTGT TTTTGTTTTGACTCCATTTTTTATATAAAAACGGCTTCTAAAGATAGAAA CACAAAATTGTTTGCCGAATTTGATCCTTTTCCCATTACATTTTATCATG ATTTAAAGAATCTGTTATTAGAGGCCGTCCCCTAATTGAAAATTGACCCT TCATGGCGCTAGCCTGTACATGTGAATTGAGAAATGAAGATATTCTATCA TTCTTTTTCTAACTTGTCAAATTTCTTCAAAAAAGAGATAATTTTGATCT ACGTTTTGCATTTCGAACTTCAAAACTTTCGGTGATGTTTACTAACAACC AGGCCTGCATTTCTGAAGGACCCTTCAAAACAGTGGATAGGTAGAACTTC TCACATAGCATTCAGTTTAGTCATCCAAAAGGAAAAAAAGATGGAGTGTT TTCTTTCAGTTCGAATTACAAGATGCGGTGAAAAAGTCACACAAAGATTT TGTTGCTTAACTTCTATTTTCTCTACAAACCTTTCCCTTGTGTAATCAAA CACCTTCTTTTTGTAAACCAACTTCTAATTCTTCTGTAAAATATTTACTC CGCTCTGAAATGTAAACGAGTAAAATGGAACCCCATAGCAGCCTTTAGAT TATGTTCCCGAGAGGAAGTATAATTGAGCAAATTTTGTTAGTCTGCGAAT ATAAAGGTCATGTCAAAGTAATTTATTTCCCCCCTTTTTTGTAGGTTGTA GAAGAAGGAAGCAACGCCCTACCAAGCTGGCTATCTTTTGATACCGAAAG AAATAAACTTCACGGAGTTCCCTTAGAAAAAGACATTCGAAAAGGACTAC GTATTATATTCAAGCCGAAGAACAGGAACGAAGTTACCAGAAAACTCACT TTGACTGTCACTAAAGGTAAAAATAATCACGGGTGCAAAGACGCTGCTAC TACACTCGCCTCAGTCATCTTTCACGCGAATATCGAGAAAATCACTGGGC ATGATCGAGTCAAATTTCTTAGGGAATTTTCACATCGTTTCGATGCAGCT ATTGGTGATTTGAAACTTGAATATGGAAACCGTATGGACGGCAATGAAAT GTTGTCTTCCAATCTCCGAATGGCCGGCCCTGGTGATCATCCACGAAAAA TTGTTGGAGAAGAACCCGGATTCACTGTTTCATGGAAGCTTGCATGTGGG TCTAATATTGAAGGTTTGTTGCTAGATGTTTTTAGTAGACGTCTCTTTGT TTTTGAAAGTGGAGAAAATATTCGAGCTTATCTTGACTTTTTTTATAAAG GGTTTGTACAGAAATGCTTAAGTGGCTTAAAAGCTGGTTTACCATAACTT AACGACTTGGCAATCCGCTTAAAGTCAGCTAAGACGTTCATCTGCTTTTA CACTTATGGGATGTAAAAAGTTAATCATTTCTCTTCTTTCTTTTCTTTTG ATACATAGGACACCAAGATGTGAGCGTGTTACGAACTTACACCCAACGCG AAGATTTTTCTGACTTCCATTATCCCGTTTTGGGATGGTTTGTTACTTCC TCAAGAACCAAACGCAACCGTCGTGCCCTTGGCGCTGGTGCTACACCCGG AGCAACGCCCTCTATTCAAGGCACGCCAACAGTAATCCCATCAGCAAGTA TTGATGTTAGACCTTCCGTTTCTTCCATTCAAATCACGCCCACCAAATCG TTACCACCCATGATTCAAACGTCTGTTATTCCAACAACACAACCAGACAC AACTGCCCCACCGACAACAAAAGAAGAAACGACCGCCCCTACTACCACCA CAACGACAACGACCACGACCACCGAACCACCCACCACTCAACCGCCCACC ACCATCCAACCAACTGTCAATCAAGCTCCTGAAGTTGTAGATGAACACAA ATTTGGTGAGATAAAAGTGCAAGAACAGACACCAAAGATCTTTTCAGTTC CTATTGGATTATTCAGAGATGATGATCCTTTGACCATTGACCTTCTCTAC ATGAACAAAGATGCCAGTTGGTCAACTAATGTTCCTTCATGGATCGCCTA CAGAGAAGAACGAAAAATTTACCTTCTACCAGAATCCAAAGATGCCGGTT CACATGATTTCGCTTTGAAAGCCAAAGACGATAAAGGACTTTCAGCTGTT TACAACTTCAAAGTTATTGTCTCTAAAGACCAATTTGTGTACAACTTCAA GTTTAACATGACCTTGGAAATTGAATTCGACTCCATTCAAAATGACCCCA TCAAGAAAGTCGAAATCATTCATAAGATCGCTAAAGCTCTTGGATATTCT AATTTGAATCGTATCAAGAATGTCGAATTCAGAAAAGGATCTGTTGTTGT CATTTGGAGTGACGAACTCTTGAAAAATGCTTCTGACTGCAATAATGCTG AGCTAGGTTCACTGGCACGAAGACTTGGTGATACTTCTAGTTTGAACGAA AAGTTGCTTCCGTATACCATTTTGTCATCGGGAGTGACGTCAGTTTCGGA CGAGTGTGAAATCGGATTGATACCCTTAGTGAACGATCCAGAAGAAGAGG AGAGTTTGTGGCAACGCATCTTGATTCCCGTCATCGTCATCGTTATCATC CTGCTCATCATCGCGCTCATTCTGTGCTGTGTTTACCGACGCAAGAAGAA GTACGAAACGCAATCCGATAAAGATGAGTCTTACATGAATCAAAAGAAAC CCGTCATTTTCTTAGAAGAGTACGAAGAAAAACCAGACTTTGTTTCATTG AAACCTTTGATTTTACCTAATGAAAAGCCACCAGTGCAAGGCTATGGACC TCGCGATGGTTCGCCTGATGGGCCAGAATCGTCAACTGCACCATCCACCG AGGATGACGAAAACGCGCCACTCGCTCCAAAATCTCCCAAAGAAACGCGC GGCGGATACAACGCACCGCCACCATACTCCGCTCGTTAAGACATGGATAA GGTTATGCATTCAGTGGCATTTGAACTATACTGGAAGTAGGGAGAGAAAT GTTGGTGGAAAGTGAGATGAGGAACGCCGCTCGCTTCGCTGCAATTCAAG GACAGGCAGCACTTTTCGAAGTGGGCTTTCGCGTTTTAGATAGGTTATTT AAACAAATGGAGTTTTCATATATGAACATCAGTCGTCAACCATATTTATA TTTTTCGTATGGAACTTCAAACAACAATTTTTAGTTCTTTTTTCGTTGGA ATTTCGTGTTTATATTCGAATTTGATAAGCTTTTTTAATTCTGTTATTTT TGTTTGTTCAATTTTTTGTTGAGTTTTATTTTCTTTTTCATACTTTGTTG TTGACTCTTAAGATTTTTTTCGAAAATTGGGAAAATAGTACCCAGTTCGT AAGAAGGTTTTTTCTCTATACTGACTGCGACCGGAAAATATTCATCATCT TTAATTGGGCTTTTACATGTTCAAATTCTGTTAGTTCCGGTGTTTTCACA TCATGCCGGGCAGGGACAACACATCTCTCCTTCAAGGAGTGTTGCAATAC TTTTTTCAGTATTTTTACCAATTCTCTGATTTTTACTAAATACTTAATTT TTCTATTAAATATCCAAATGTACAGTGTTTATTTTTGCATCACAGAAACC TTTAGTTTATGAAACTGAAAAATAGTCAATTTTCCGCAGTGAATGTCATT AGGTAGAGTATTCAAATAAGTTTGCTGTTTGCTCGAGTCAATTTTTTTCG TTGTGAAATCAAGTCGAAAATTCTCAAATTCGAAACTAGAATGCCACGGC TAAAAGAAACTTGACTTAAATTTGTGAATGGCAGACAATCATGGTTTGTC AGTAATTTAATTTTTTTAAAGATAGAGTTTTAGATATAGTATCGGAATTC TCTCTCAAAACATTTTGTATGTTGAAAAAAAACAAATCTAAAAAAAATGT TGAAAACTTAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001117TCONS_00001117Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001117-proteinTCONS_00001117-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:424678..429838 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
DAG1dystroglycan preproprotein Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
32.26 28.7 9.94 7.12 137.19 105.01 66.45 74.89 26.4 59.41 26 13.61 61.55 55.61 33.17 33.3 80.59 92.42 63.09 81.41 84.29 88.32 39.62 53.97 59.08 71.79 101.76 87.71 124.15 128.65