XLOC_000606 (gene) - C. hemisphaerica

Overview
NameXLOC_000606
Unique NameXLOC_000606
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000007:1366046..1373423+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000606 ID=XLOC_000606|Name=XLOC_000606|organism=Clytia hemisphaerica|type=gene|length=7378bp|location=Sequence derived from alignment at sc0000007:1366046..1373423+ (Clytia hemisphaerica)
CTTTCATTTGCGTCTTGGTCTTGGTGGGAGCACATCATCCAACATCCAAA AGCATTttacaaaaatctcaaaatttcctTGCCTTTTAATTCTTCAAAAA TTCCTCCCAACAAATCTTTGAGGAGTGCGCGGCAGTTCGCAAGGAGTGGA CTTGTAAGTATTTGAATGAATTATTCCCTTCATTTCTCAATGTTGAATAG ACCTCTGTCAGTAGCCATtccgggtttgcttgttttttatttgacgctta tcaaaatcttcaattttaggtcaaactttgacaagcaatttTTCTTTGGG TAGTTGAgctttaaaattaattatttttgagtaatttagagttttctttt agctttccaaccatatataatatgcaggtgtaatattctaTACTTTTGTT TANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNcgaaaatacctgagaaatccaat ggtgctactctctgaaattaattctttcattaaagttattaatttttact tttcatactttggcaagcattttcagcctgaaaatgaggactagaattat agagagtgataccactgaaaaatttgacccttttttagcctagaacagtt atttatatgccatggggaatttttccttcacagcgctttgattacaaaga taggtaggttcagcTATTTTAGCTTCCGCTTTAtaacatttttattgttt tttgcaatgcaatgtcttctttttcaaaaaaatgtctttccatttcttcc ttgaagtgttagcaagccattacaaaaagaatttgataaaagtctgcagt caaaatgaagatatctggaatatcttgattcaatacaaaagcttgaattt tcagGATATCTTCATtcaatacaaaagcttgaattttcaattttcgcagc atatttcggtgccatttcatatgccatttctgggctatattgtcaacctc aaatgtctaaaaaggtgctattttagcggaaccaaaatctcaatatctcc ggaaccgcttatcattaggaagtgtatgacccctcattttttttcttttt tgaagctctacaaggtgaactaggtttgattgccaccagaatagtttcaa tttgaccctggaatggctacGCTGTCattaatgtttttttcattattttg ttatGTGATCTTGACCCTATTATGTATTAGGGCCCTGTAGTAAGTGGCCA TTAACTTTGATTCCTGTACAGAAAAGAAATAGGTTTGATTATCATTTCAC TGGtcttcaatagaccttttttcaaagaggccaccctgttgaataattat gtagtccagcagaaaaacaatgataaatcCATGCATAATTAATACAATac gcatgatacagtaattgtgcatggctctatcattgtttttatggctgaac tacataattattcaacaggacgtcctctttgaaaaaaggtctatacccTG AAGTCAGGgtataacttgcatcagtagaaGGAAACTTACATAGCCAGtta gttacatcaatatgccaaaaacattttgttcaaccaccttcacttcaaga tagaccaccatgtggctttcagccttttCAGCCAGTTTTCACAACAAAAG CCAAGTATATTTTCAACAATTGTGCCTCTACATCCAGCTATGCACAATTT CTCGTAAATATTGTCTAACTAAAAAAATTCCATTAATACTCTAGTTGATG GAGGATCATCATCATAGAGCTTCCATAATTCAACACACAGGCTTTCTTCA CTTTATTTAACACTTGGGTCTTTAAatggatacatcattgaatattgaat atgccattgttcttcaaagtttgaagttttttttcacaaaaagttCATGT TCATCGATATAATAATGTAAGTTTGAGAATCAAGCCTTTGGTTTCAATAG GCTCAAGCTTTCTCAGTTGCCAATAATGACATAAAAATAATATCAGCCAA TGCAACACATCCAAGTTAAAGCAGGCTGCATAGTAAAAAACATTGCTGAC TGCCTCCAAAATATGTACGTTTAAAAAATATCCCTTCTTTGGTTACCATC TTTTCTTTAAGTGTGTTTTTGCTTTGGACAGCTATGCACTCCTAACTCTT CAAGGATTGAAGCCTCTGAGAATTATGTTGTCATCCCACAAGATATCAAA TTTGATACTTCCATAAAAAGTATCAAGAGCAATGGTATTTTCAGCCTCCA TGATTGTCCATAACTCCACAAATTTACCATTATTAGCATAACACACTTTT GATTATGGTTGGCTATCCGTGTAATTAGTCATTTTCACCATTTCGATGTA CACCAGAAAACCTGGAATCCTTGTTTGGTTTTTAAAAGATTAAGTCACAC TAGCTTCTGGCTAAAGTGTGTGTCAAAAATTAATGCTGCAAAAACGCTCT ATTGCTTACTTCAATCGCAAGCAAAACTTCTGAGTGAagggatttatgaa aaaataaatctgCATTTTCAATAAGATTTACAGAGAAGAAATCCTTAAGA AATTCCCTAAATTTTGAGCCAAAGATAAAGATTTGGCTGGAAAATTTGCA TGTGTGGAATTAGTTTTACTTAAGAGAGTACTCTAGGCCTTGAGAAATCG AAGTGCTATCTTGGGAATtaaataacaaattttggttggtttatTAGCTG GCTGCTGCACACTNGCAGTTAGTCAAACTAGCTTCTGGCTAAAGTGTGTG TCAAAAATTAATGCTGCGAAAATGCTCTATTGCTTACTTCAATCGCAAGC AAAACTTCTGAGTGAagggatttatgaaaaaataaatctgCATTTTCAAT AAGATTTACAGAGAAGAAATCCTTAAGAAATTCCCTAAATTTTGAGCCAA AGATAAAGATTTGGCTGGAAAATTTGCATGTGTGGAATTAGTTTTACTTA AGAGAGTACTCTAGGCCTTGAGAAATCGAAGTGCTATCTTGGGAATtaaa taacaaattttggttggtttatTAGCTGGCTGCTGCACACTAGCAATCAG taatttaagttttcaagtgttaattaattgtcttgggatctttaatttga ttcaggtaactctcatccttgttgttgcaaataNgaccaaacaaatgact gaactcaaaaggtactatgatgtagtttctaacctgatgtgtaacctaat tgttttttcgctgattttcgcgaaaaaccgcaaaaactggttatcacgtc ataatcgatgacgtcactaaaactaaaaattgaatttctcaagaatggtt tatcaaattgtcttcaaactttcaccaaatatgtatcttactaaagtcaa tcatttgaaaaaaaaattctttcgaaattttgatgacatcagcagaaatt agtaaaaaacgaaaaatcctattttctgctgacatcatcaaaattttgaa aaattatattgttcaaataATCGATGTTAGTAaaatacatctttggtgaa agtttgaagacaattggataaaccattcttgagaaattcaatttttagtt ttagtgacgtcatcgattattacgtaataatcagtttttgcggtttttcg cgaaaatcagcgaaaaaacaattaggttgcACAttaggttagaaactaca tcatagtacccttcatgttcagtcatttgtttggtcattttctgtcgact aatgcgatctaaaaattatggtaattttaagacatgccataacttacccg agtgtGTGGAATTAGTTTTACTTAAGAGAGTAATCTAGGCCTTGAGAAAT CGAAGTGCTATCTTGGGAATtaaataacaaattttggttggtttatTAGC TGGCTGCTGCACACTAGCAATCAGtaatttaagttttcaagtgttaatta attgtcttgggatcttgaatttgattcaggtaactctcgtccttgttgtt gcaaatacaacCATGATGTTGTTATTTTTGAAACCTTGAGATCCCTGTGT GACTAACTGTAAGGGATTTTATTCAGTGCAatgcaaatttttcttttcaa aagactttcacaatctaatttttttctcattgttTCATTCAGGGCCTGAA AGCAACAAAGCTTCTGCCACCTGTTGAACTCTCCTGGGACAAAGCCTACG CTGGAATTAGCTGATATTTGCTAAGCTAACAGTAAGAAAGTTTGGTTATT TTAATATCTCTTTTCatttaccttggaaaatttttttattctccTAGTAT CTCAAAAAACATGCTTAAATGATTCTTTTTCTCACGTTTGTAGCAAGAAC TACTGAGCCAAAATGAAGCAAGTAAAGCTACATACAGGATCAGTAATTGA CGTCTGTGATGACGAATTGAATCTGACAGATTACATTCACACCAAACTGA ACTCAGCAGGGCGAGAAGATAAAGATGATCCCTTTTTTGTCTGTGATCTT GGTGATATTGTCAAGAAATGGAGACGATTCCAAAGAGTACTTCCAATGGT CAAACcttattttggtaatttttttacatgttttCCTATGGTTCTCTTTT TGATGACAAAATTTACTTCACACTATAtaattctttttctaaaattctGG TCTCAATACTATATACCTTCATCATTTCTAAATTGTGTTTtagttttgaa ttaaaattgcATACAAATTGTTCTAATCATTGTAGCCATGAAGTGCAACC CAGACCTAGAGATCATTAAACTCATGATCAAATTAGGTTCAAACTTTGAT TGTGCAAGCAAAATGGAGATCAAGACCTTACTTGATTTAGGGGTGGCTGC TGATCGAATCATCTTTGCAAACCCCTGCAAACAAACATCATTTATCAAGT AAGTGTTTATTATTAGCATGGCTTTAACTCCTTTCAAAGGAATTGGaaag ggaaaatatttttagtcttTATTAAGGCTTAGGGNTTTTAACTCCTTTCA AAGGGATtggaaaagagaaaatatttttagtcttTATTAAGGCTtaggga cacgagaagttttttttgtgttgatgcaatgcaacatgcttcatctcacc aacctgaaacgctttctcgtgtctccaccccattttcttttaataacatt tgtgcttctctcacatttgtccctgggacaaaatcagcgtgtcttttggg catttccctcactttttgtctcataaaacaaaaaaaagaaaccacaAGAC ATGCTCTTTTTtccttgtgttggtgggatagagcatgttgcattgcacca acgcgaaaaaaacttctggtgtccccaagcctttactcttattttttttg aatttttatttattttcagataTTCAGCAGCAAATAATGTCAAATTGATG ACTTTTGATAATGAAATGGAACTGCGAAAAGTTAAGCAATTTTATCCTGA TGCAGAGCTTGTTCTTCGAATCAGAGTTGATGATTCAAAATCACTTTGCA AGGTAAACTCATTCCATCTCTCTAGGGTTGATGCTTTAGTGcttttttgt atatttatttttaagatattaTAATCAAATATTTCCATAATCAACTTATA TTTCCAATTTTCTAGTTTGGAGTTAAGTTTGGGGCAGAACCTTGCAATAC AATGCACCTTTTACAAACAGCCAAACAGCTTCACTTGAATGTTGTTGGTG TTAGGTAAGTCTTTATGTCACCCATTTCAGATATCTGGTACCCTGCAACT GCAAGCtattatgaaaaaatcatttgcaGATAGCTTGAATAATGATTTCA AGGGTAGGATAAGATGTccaattttagcttgaaaattttgatttgcaaaa tttgaagcAATCATCTTACTGTCCttgtaacattttcaaaaacgaaatgt tttttattgatTAGTAAGAAATTGTACAGCATTTCGTATCAATAAGGAAA ATATTTAAAGAAAActaaaactgatcaaaaagttAGCATCACCTGTAATA ACATGCTCTGAAAGTGTGAATGTTTGAATTGATtccattgttttattttc agctTTCATGTTGGAAGTGGTTGTTATGACGCCTCTTTGTTTTATGATGC CGTCAAGTTGTCAAGGAAAGTCTTTGATGAAGGAGTAAGTGAAAAACAGA AAACTTAATGATTCTGTACTTCTCCCTAATCGTTCTAAGCATTTTGAGCT GATCAGCTTGTTTATTTCCAAAGCTGATCTACTTTTAATCTttcgatttt cttttttagCGTGAAGTTGGATATCAATTTTCTATGTTAGATGTTGGTGG TGGCTTCCCTGGAGATGATTTAGCTAAAGTCTCATTTGAAGAGGTATTTT TAAGATTTCCTTTTAAATGAACAGATTTGACAAACCTGGTCCAGATCTAT TTGACAATACTCgctatcaaataaaaataaatattcttaGTAGGAAATCC TTGTTTATGTACTCAGAAATATTTGATAATAAGAGTGTTTGTATATTTCT TTAGACTGCTGAAAAGTTGAAGGATGGTTTCAATGCGTTTTTCCCACCAG AAATGAATGTGAAATTTATTGCAGAGCCTGGTCGATATTTTGTGGCATCT GCATGTACAAACGTCTGCAACATCACTTCTGTTCGGAAGTTAGAATCAGG TAATGAAAGCAATTTCATGTACTACATCAATGACGGTGTTTATGGATCAT TCAACTGTGTCATGTTTGATCATTACAACCCAACCGCAAATGCCCTTCAT GTCACCGATGGACCTGTCTTCAAATGTAGTGTTTGGGGACCAACTTGTGA TTCTCTGGATTGTATCTCCAAGTCTACACTTCTACCAAGGGTAAGTTTCt taaaacattattttcttgTATGTGTTTAAGAATCTCATCAGTCAATGATA CAGATATGTTCAGTAATCCCTTTTTAAAATCCTTTACATTGTCCCTTTAG ATGAACATTGGCGATTGGATGTATTTCCAGAACATGGGAGCGTACACTAT CGCGGCAGCATCTAAATTTAATGGCTTCAAACAACCCAAAGTCATTTATA TGTGTCGTCGCAAATTTGCTGATACTGTCACTGCTGAATCAGTGAATATT GACACCAAAATGGAATTGATATCTAAGAAAGTTTTACATCATCACCCTCA AAGTGTTGTAAAAAGCGCTGCAGTAAACTGAATATATTGTCATGCAGTGC CAAGTAGATTAAATATGAATATAGCCGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001073TCONS_00001073Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001073-proteinTCONS_00001073-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:1366046..1373423 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ODC1ornithine decarboxylase isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.03 9.41 7.64 7.06 81.83 65.7 83.67 87.03 114.05 89.38 81.44 105.69 166.25 144.71 69.03 75.64 152.25 128.78 83.08 89.55 166 171.38 96.18 112.69 53.02 53.42 121.09 89.2 357.53 203.91