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XLOC_000600 (gene) - C. hemisphaerica

Overview
NameXLOC_000600
Unique NameXLOC_000600
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000007:1166492..1174367+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000600 ID=XLOC_000600|Name=XLOC_000600|organism=Clytia hemisphaerica|type=gene|length=7876bp|location=Sequence derived from alignment at sc0000007:1166492..1174367+ (Clytia hemisphaerica)
aacaaataatTCAACATGGCGGATACTGCGGAAGATTTCAAAATGACGGA TGATGTAAGTTGCCAAATATTTGAAATCGATGCTAATTACTAGTAACTAA ATCACATTTATTAAATCTGATATTAAGACATCCAGTGTTTTTCAATTTAA AGCAGTTAACTAGAAAATGCCATTACTTATCAATTTTAGGAAGCTCGTCG GATCAAACAAGCACTTAAAGACAAAGAATTCATGGACTTGCTGGTAGAAT ATGCAAAAGAAATTTCTGATCCCGAAAATAAGAAGGTGGCATAACAAATA CATTGCTCTTACTTCTTCTTCTTCGCGCTAAAACCTTTCTTCGAACGTTT GGGCACGATAGAGAAGGAATTTCATCTTGTTcaacctttgaaaatttgat ggcACTGTATTCTTCATGTATTTGAATGACTACGTTTCTTTGTCTGTTTT TTCAGAAATACGAGGAAGAGATCGTTGCGATGGAGCGACAAAGAGGTCAA GATGTTCGGCTGCTCAAACCACAGGTATCATAAAACATTCATGGGGCATC AATGAATTTATCCtcattcttcttttgttttatgtctACTCAAGTTGGTG AATCTTTTATAGAAAGAAacctaagaaattcaaaaatgttttaatatatg attttttttcatttatataCAAAACTATTTTCTATCAAATTCCACCTTTT TTATTTAGTCTGGTTTTGTGATAAAGACAGTACGATTATCAGACAATATG AAAGTCTTTTTGAACATTTGCAGCAGCCCTGAAGTGAAGGAGTATGAATT GCAGCATGTGAAAGGAGGCGCCAACCTCTCCTTACCGCATTCTGTGTCTC CTGTACGTGAAGACATCGACAAAGGTGACTAAAAAGTTTCATCACTTTGT ATTGTTGATAATTATTTAGTTTGGCAAAACCAAAGGACATTAAAGTATCA CAGGATTAGTGCAAAGATTTGTTTTGGTGTATTGTGTTAGTTTGAACTCT TGATTGTAATTATTTTCCCTGTTTATTTCTAGGTGGAAAGGCGTGTATTG TTTATGATGTTTGTTTCAATCCCAAATCATACGATAAAGGAATGAAGGTC AGGCTTACTTATTTCAAGATATTAACACCAGATTATGCTAAGTTTCTATC GTTAGAGCTTGAAACATGAATGCGACGGTTTCTTAAAGATAGATTCCAAT AAGGTATAAAGAATTGTTGAAGTAAAGAAGACTCGTTTTGTCTCTAGGAA TCGAATTTCCGCCAGTCGATGGTGGACTCAGCGTTCGATACAATTGAGCG TCAGATGAACATCAAACTCGATCGTAAAAGTAAGTCATTGTTACTATCTC TCTCCTTTCTCATTTAgatctttaaaggttttgttttgattgaaaggtct gatgatgctgatgtagtaaaaacaagtgcgacaagactagaaaatacatt gaataaaaaaccattcctcaaacaaagggacttttactgatactctttcg aatgttttatgtttataataaatagaacgttttctatcttataatcaaaa cattcgattgtaaatcaactttgctattttttgtttacaaaagcaataga atgtgAGGTCACATATCGAAACAACTtcgatctttcacttgtttgcagga tatcgttgcgtaaaaaagtagcttttatttatctgactcagcatgaagac actgcctaaaataagctccttttattcccgTAGAAAACCTTTAAGTGAGG CATTTTCAAAGGCTTGCTTGAAAAAACTAGGAATGATGTTTGAGAAGAAT TCTAACTCTTGATCTTAATTAAGAAACTTTTGTTAGACGGTTGTATAACA AAACATTGAATGCTTTCTCGCATCCATTTAGACAAGAAGTTTCCGAAATT GAAGTACAAAGGACAAGCCCGACCACTGATCATTCGACCGGAACAGGTTA GCActcgaaaatattttgatagaCCTCTTTTGAGATCGACAATTCATCCT CCTGGAAAAACTTTCTGTCTGTACGAGATACTAATAAATTTGTTGGAAAG TCTCAATCATGTGTATTATATTTAATCTCTCTCTCTATAAAGCAATCACA GCAAAAGACTTCTCCAAAGGATGACAAAAACTCTAAGACTGAAAAAGACA GCCCTTTGGATTTTCGATATCCCGATATTCAAAAGGAAAATAAGGCCACG GAAGAAAAAACTGGAAAGGATAAAGAATCGGAAAAATGCACGAAAAGGAC GGTTATTGACGAAGGGAAGCCGGTAGTTCCGAAGTACAAAATCGTCCACA GAGGTTTCTTTGAAATGACTGATTACACTGGGGGAAGGTACTTCaatcaa aactttttcatttttattttaagtgATCTCTCCTTGCAAGACTAGAGTTT TTTCGGCCATCTTTATCATGTCTTAAACAAATTAAGTTTTGCTGTTGATG ATCTGATGTATTTATGTTTAttgatgatttttattttttacagttTATCC TCGACTACACCAAAAGAGCTGGTTGTGGAAATTGAGCTTCCCTTAGCTGT GAGTATACTTTTGAGgagcttttgtttctttttttttatttcatgccATC AAATTTCTGTCAAATAATTGCGAAGTCCGTCCCGTTAAGGACAAATCCTC CTAAaatgctttctataattcgaatatctCTGAAATTCGAATAAATAAGA TTTCCCGCTCGAGTTCAAATTGGCGAGAGTGAACTGTACCTTCTTCAATT CCTTGAACCTCCTTGCTGTCCAATTCTactgtttattaaaatctctCATG ATcgctcatgttttttattttgaatttccagCAAGAGTCTTTTCTTTTGG AGGCTAATATTAGAAAAAGAGTAATCGTAAAATTTCTCGAATGTTANCTT TTCTTTTGGAGACTAATATTAGAAAAAGAGTAATCATGAAATTTCTCGaa tgttatttttagaaatcagCAAATGGTTTGGATTTGGACATCTTTGCACA ACAATTGATTTTAGACTCAGAGAAACCGTCTTATCACTTGGATGTATCTT TTTCAATATTCTTCATAAAAAGTTAGAAGTTTCCCTCTATCAAGAAATAA GTGATTTCTCTAAAGCACCCTTGTAGCTCAatgtaaagttttctttttga tataaaaagtgttaaaaattcTCTCTCTCCTCTTCTTTTCAACTAATGAC ATCTAAAAGAGGTTTTCCTTGACGCAGATGTTTTACAGATTTCTCTGCCG CATAAAGTTGACGAGGACCGCGGAAAAGCTCAATTcgataaatccaaaaa agtGTTGATCGTCACGCTACCCATTTTGAAAGCTGAACCCGTTACCATGG TACCCAATCCTCCATCGCGATTGGTTGAAGAATGCGTGGATGAGAAAGAT GTGATTCATAATGGCGGTCATTCACCGGATAGCGGTATTGATGAGATGTG TAACCATCATCAAAATGACGAAGAAGATGCAGAAGTTGTGGAGGATGCAG ATGAATGTGTTTTTCAACCAAGTGATCTCGACAACGCTGTCTTTGAAACC AAAAACTTCGAAAGTAAGAAGCATTTAAACTGTAAGAACAGAGGAAGTGA GAATTCATTGCTCTAATAAGGTTATACCCTTCACTCTTTATGTAGTACCG TATTCATCTTAGTTCATCATTAGTTCCatgtctttcatttttgttttaac tttttctaCATTTCTAACTGAAAAAAGCGCAAGGCTGAAAAGACTAGTTT TTTCTTGAAACTGGTGTTCCCTACAAAGCCTTCAAATGAATACGCTTCTT CCNTAACTGATGAAAGTGCAAGactattttttcttgaaattggtgtTGCT TACAAAGCCTTCAAATGAATACGCTTCTCTTTTCCCAGGTATGCCAATGA ATGCACAACTGCCACAATATTCGTTCGACCAGACAATAGAGAGTGTTGTT GTCGCAGTGAAAGTACCCAATGTTAAAGTGGAAAACATCTCTCTCGGTAT CACACACCAACAGGTTAGtagaaagtcaatttttattaatttaacTAGGC TTCTATCAACACCGAAGTAGGTTGTGTGTGAGTGAACAGGGTCAATGATG TCAGAATGTCTCTTTCTCTGATCGCTAAAATGTAACTACTTCTGTTTTGC ATTACCCACGGTCCTTTTTAACTGGGATCTGACCCCGTTGCATGTAGCTT AAAGTGGTGAATTGTTAATTCTCTTTCAAGGTTTAGAGATGGAACGCTTA CAAAGTCACTCAAACCTTGCTGACCAAACTGAGAGTAATACTAGTTCCTA GTTCATTTAGGTCTTAAAAATATACTAGGATTAGAGATTTATATTTCAAC CTAAAACCTGATAAGCTTGGATAAGGCAATTTGTAATAAATTCCAACATT AGGTTATGTAACTTTAGCTTGGCTTCGGAGCCACTCCCTTAAATTGAAGT TATCAGTCAAACTTAGTATATTTGACCTAGCTTAAATGGCTTGCCGTTAA AAAAACTTGTCCCTTAATCTCTGAGATAAGGTTATCAAATTTTTGGCTTT CATTTTTGGTTCTTTCCTGTTCTTTCTTCGTCATTAGTCAATGGAAGTTT TTAACCGCACAATATATCCAacccaaattttcaaactttattaCGTAATC TAACATTTCCTTATTTTCATTTAGGTCTGTCTGAGTTTGCCACAAGACGC TTCTGACATCAACTCGCCAGATTGGAGCTTAGTCATTCGTTTGGATGACC GATATTATCTCGAAAAAGACGATTGCGGTTTCGATATTTTACCTGACCGA ATggaattgaatttgaaaaagaagaaaagtgaATTGTGGGATCGCATGTT CATTGGGGTTTCTGAATCTTCTTTGAAAGTATGTCTTCTTTGCTTGTTTG TTGAAATTACTGAACCGTTTCTCTGAACTCTTTTGTTTGTTAGCTAGAGA AGCACGGTATGGCTTCTAAACCGTTCAATAACtattataattattttttc tatgAAAGTGCTGTAGCAGATTTAAACTATGGCTAATTTGTTTCAATATC TGAACGTGTTTGTTAGTCAAAAAGATGAGGTCAGCTTGCCTTGATATGTT TCCATGCTTAATGTTCACCTTTTTCTTGagaattttaagatttaaaggAT GAATTAAGAAATAAGTTTTTGTTGTCTATTTAATTTAGATGGAGGTGTTT TTGGTGGACGCCACAACTTCAGGCATCGTTGAACAATTGAAAGCTTTGAA TGTGGATAAGGTGAAATTCTTATTTGTTCTATTCCGTATTATTGGCTATC GCCGCCTTATCCTGAACTAACGCCTCAGTATAAAAAGATAACTCAGTAGT TGAAAACTGTTTTAGTTTTCACTGCATACTTTTCCCTGTTTCACTGCATA TTTTCCCCTGCCTTACTGCATACTTGCCCTGTTTCACTGCATACTTGCCC TGTTTCACTGCATACTTGCCCTGCCTTACTGCATACTTGCCCTGTTTCAC TGCATACTTGCCCTGCCTTACTGCATACTTGCCCTGTTTCACTGCATACT TGCCCTGTTTCACTGCATACTTGCCCTGCCTTACTGCATACTTGCCCTGT TTCACTGCATACTTGCCCTGTTTCACTGCATACTTGCCCTGCCTTACTGC ATACTTGCCCTGTTTCACTGAATACTTGCCCTTCTTTGCTTAGCTTCCAC GAGCAGAGGTCGGTGATGTAGAAGAACGCAAAGTGGCGGATATGGAAAGA CGTTTGGAACAACTgctaaatgaagaagaaaagagtAAAATTGTAAGGAT CAATCTACGCTAAGTATAGGTTTTGcctagaaaaaaaagaaaatacctCA GGTGGATTAATTTTGACGTGGATTTAATCTGGCGattggcaaaaatattt ttgacggGGATTCAATTTGGCGATTGatcaatattttgtaaaaattggcA AGGATTTAATTTGACGAATTAGGAATTTGTAGACACTAAAATGGATGAAA GTTACtataaaatatactaaaaaggtTTGATTACTCACATAATATTCTTT CCGTTAAATttagcggggatttaatttggcaaatgacctattttagaaat ttggcggggatttaatttgacgaattttgtcaaaattcgccaaattcgcc taATTTAATctccgccaaaattaatccacttaaggtacaaGACACAGACC TCAAATCATTCGAAAGTCTTTTGATAAGAATTAGGCTTTGTAGCAAATAC GAAAAGGTTTAGAAACAAACGGTGTGATAAGAACTTGATATCAATgttgt ttttccttcaaagGACGAAGAGACGTATGAGAGATGTTCAAATCGAGATG TTGCACGTCTGAAAACAGGTCAGTAGTACAGTTTCAATTTAAACAAATTC TTCCCTTTGATGAAAACCTTAATCAAATGTTTAACTTTTAtcgtaagaaa aataaaatgcaGAGAGACATTTTTCAATCCactaaaatcctcaaaaaccg TTTCTTTGTAGAGAGTTTTTCGGAAGGCAGCGATCTTGATTACCGACATG TCGACCTGATGGAACtcgctgatgacgtcatcgacgaAAACTCGCCGTTA ATCTCACCCACCTCCAATACATTGAACAAACATCATGAGTTTGCGGCGCG CACCAATCGGACGCTTGAACGTTCTATGAGTCACGACGCATACCATCCTC GACTGCGTTCTATCTTGAAACGTTCGAAAAGCGACGGTGCTGCAAACACT ACGGATactgatgatgacgtcataccTCATCGAGCGCGCGCTACTACTTA CTCAGACGGTCATACTTACTTATCGGATGTCGAGAACGACTTTTCACGAC GTCGGAATAAATCGGTGAGTTTTCAAGACGAGCCGATTGTTTTTGAGTTT ACCAAAATGACGAAATGGCAGTGGAAGCGACAAGAATTaaagaaagcaaa gaaaaagaaatcgaaaGCAAAGAACGGAACGAGTTCCGATCAAACGGCAT CCTCGGCGGATGAAGAAGAATCTTCAGCTGTTACCTctcaagaagaagaa aaacttgACAAACCGAGCGAAGAAAAACCGCCCCAAAAACACGGCCGAAA ATGGAAGAAAGCGCAAAAGAAACGAAATCGGAACAACTCGGAAAGCCGGT CAACCGAAGAAGAAACTGAGCAGACGAACAACGGACAGAAGAAAGACAAA CGGAAAAAGAAGAATAAGAAGAACAAAAACCAAGTTGAAGATGATTCTTC AAATGAAAGCAAACTGACTCTCAGCAATCCCTTGATTTTCCAATTAGATT GATTTTTGCATGACATTTATGACATCGCGTTTTAGGCGaatattttcaat tgtttttcgtttaattgttttttataaagattGATTTTGTGTAAATAATG TGTATATATGGTAGACAACGTCGAGGAGCCCAAAAAATTGCTGACATATG CATATTCAAGGGGCTTCTACGACACAACGGGTTCTGTTAGTCCAGTGTGC TGTGAACTTACGAAAGTTTCTTTTAATTTAAATAAAACCTTTGAGTACGT TTGACTTGAAACTACGGGGCTATAACTTCAGTGAGCAACATTCGCATTCA CATTAGTTCCAGAAGGTTCACAATGTTTATGGGTACTTGGACTAACattt tttagagttttattttttatttgatacacCATGGACAAGCTATATAACTA AAAGCCATGCCTCGAAATACACAGGTTTGTATCGAGAGCATCtagagaaa tgatcaatttttgttttgtgtaGTGTTTGATAATGTGCAAAATATTAATC GTGCATTGTAAAGAGGTTGAAAATCTCGTTTTGTCGTTAGAAATATCACC GAAATTCAAATATTGTACCGAAATAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001060TCONS_00001060Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001060-proteinTCONS_00001060-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:1166492..1174367 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.44 6.1 4.2 2.52 40.81 31.02 32.49 34.65 21.43 24 17.78 17.41 14.19 15.55 17.34 19.77 21.47 19.74 10.77 10.84 14.57 16.42 15.33 17.26 21.03 23.79 7.81 7.46 8.83 9.64