XLOC_000583 (gene) - C. hemisphaerica

Overview
NameXLOC_000583
Unique NameXLOC_000583
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000007:645945..649312+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000583 ID=XLOC_000583|Name=XLOC_000583|organism=Clytia hemisphaerica|type=gene|length=3368bp|location=Sequence derived from alignment at sc0000007:645945..649312+ (Clytia hemisphaerica)
GTTTGCTTTACGAACAAATAGACATTTCTTATACTTTTATTCATACTAGC
TTAAATTTGAAACACAGCTTTAGTTCAGCAAACGTTATAGCAGATGATGT
TTCCAGCCCAGACGGAGCGAAGGCGATCCCATACCTTCTCTGAAGGTGTC
TTTGACGAAGCGGTCAAGGCCCATGGAGATCTACTTTCTCCTGAAACCGC
CAAGAAGAATGATCTGTGTCGACAATACAGTGAGGGATCACCAGCTTCAT
TGAAAAGGACAGACACCCGATCTCCtatccttcaaaaacttcataAAAAA
TTCTTCAGTCATGGTTagttcaaattttctttaaacaGTTTGTACataaa
tctttgaaattttcgAGGAGATCTTCCGGTTGCCTTTTCGAATAGAGGTA
AGCTTTTGTTATGTGTTATGACACTAGTTTTTCGGGTTTATTTTGTCAGC
TGATGCTTCCCACGTGTGAATCTGTTTTGGTGTTGGAGTTGTACTTTTGA
TACTTTTCCATCTGAATTTACAGAGGCGAACAGTCCGACCAATTCACTGG
AAGATTTGACACCTCGATCACGTTCTGGTACTGGTAATTCAATCGAACGC
TTCTTCAAGAGAGATGGTTTGTCATTACTCCTTAAGCCAAAGCGTCAACC
CCCCAGACATTTTGTGGGGGGGGGTGACacccaaaaaaatgcaaacgaAA
ACTGGGAGCTAAAATACAGCCAAATACTCGGGGGCTGACATGTTTGGGCG
GGGCTGgacttttaattttatttcgtctattatttttctttatatcacca
catttttatccaaaaaccatttagtagggggaattttgttcgatttttta
gaatcgctcgactgttttgttagaagcacttgttatacatttttggaaag
ctaaggggtaggggaatcgaaattactatgtttccaattttttttcggac
actttggtgtgattttcggacaaatataacggtctcaggcaaaaattata
gggttaaaaattaatgaaaattttagctcgagaaaacggagacttgttgt
atatttttggaaagctctcaaaaaattaagattagagatatattgcaagt
ataggtgatttctatACCTAACTCGacatattaacccttgaaaaccgtgt
ttttcagccagaaacagctattttgtccagtttttgcgctttttgaagct
caatatctcgagttaaaATCCTAACAGTAACACATGTTTGCGAGGCTGTA
TTTTCATTAGAGCTGTCTGTATAATGTAATAAGCTTATAATAAATATTTC
TTTCGCTTAAGTGATAAGTAACGTTCACAACAAAGCTAAATGTTCAACCT
TTCTAAGAATGACGTATGTTGCTCGTAGCtgaaaaaaatggtgaaaattt
tCCTTGGGATAAATGTGATTACAAGCACGTTGAACATTTACAGCTCCCTC
GGGTACCTGTTAATAATAGTTGACCGCTTGTAattaaatattcaattttc
aaaagtctTTGAACTTTTTTGTAGATAATTGTGAGTTTGAGATTCCGGTA
CTGACCCCACCAAGAAGTCCACTAACCTCGCCCAATCAACGATCTTTGGG
TGGAAGTCCTGTCAACGGTATCGGCGAACTAGATATCGATCTCTACAAGA
ATTACTCGTCAGAATCAGATGATAGTATTGTGAATGAGGAACCTCGTCGC
ATGAAACACGAGAAACTGAAAACGAAAAGTTCGTTAGCTGATAGCCTATC
ACAAGATGGGTTGGTGTGCTCGTTCGAAAAATTGCGTTGTTTCCAGGGTG
ATGAAGAGGAACGAATAAAAACGAACTCTGTCGGCAGTATCACTCTCTCT
TTTCGANGAAGAGGAACGAATAAAAACGAACTCTGTCGGTAGTATTACTC
TCTCCTTTCGGTATGTACGTAAAGAACATCACCTATTGATCAAACTCATT
GATATTAACTTGAACTATAAACCTTCATTCCAAGTGCGGGAGACACATTG
GACAATACAACCTTATCTCGTGATCGACACGTTTCGAGACTCACGTTCGC
CCACTGAGAAAGGgaaatttcatttgtttcaCAAGCACCATCAACCATAT
ATAATGACTAAAGATGAAACATGTGAACtgaacattaaaaataaaacgaG
TGAAGGACACTTACTGAAAGTTGTGTTATATGATGGGGATATTTTGAACA
AAGACTTAGCAGTAGGGACAGTACACTTTCAGTTGTCCAACCTTCTTACC
ATGGATGGAAGTGAAATGATTGTCACCAAAGACCTTGCCATGTTCCATGA
GGTAAATCATCTACTGTTATCACTATTGCTTTTCTTGTTACGAAGGAAGA
CAGAGAGCCTCAACCCTCTACCCTTCTCAGTAACCAAGAAGCTTCTTTGG
AGATGTTATTGTCCGTTACGTGGATAGTAAATGCCGGAAAATACAGCCGA
TAAGGGCAATAGTCGGGAATATGTTACATCGGTAGAGTTTCGAGTAGACT
GTCAAACTGTTGTAAACCTGCTTCTGTAGTAGAACATTTCGTAGCGGAAC
TTTTCTAGTTACTTTAAAATCTGTTACATTTTCCAGTATATAAGTGCTAT
CGTGTCTTACTAGGAAATATCATTTATTTCCTTTTAATTCAGACATACCA
TCGCCAAGGAGGTACTCTTACATCCACATTGCAATGGCATTCAAGAGCTA
TGTTGTTTAAAATGCACATCGAATCCATCTCTTTCGACAAAgactttcaa
aatatcaaagGTAAATTGTATCAAGTTCCTTGATTGTATACACTCTTGTT
AAAATGAACCCCTTCTTCAGTACTTATCTTGTATTCTCTCCATCGTGATA
GTAACAAATCCGCTTTTTTGGGTGTCCCTGGTAACAGAAGAAAATAATAA
CTGGTGGATTTTGTTTCCCTTCTTGCTCTAGAACCTGCGAGCCTATTTTA
TGTAAAATCGagtcttttctttttcgttttacaGAATTGTTCATCAAGAC
GACGATATACGTTGGTAATGAAGAATACGTAGAATATTGCACCGATTCTT
TTTCCGCCTCTAAAGACCTTCAGGTCGAACAAACATACAACATTGAACTG
ACACCTGATAAAATACGAAATATGTTTATAGTGATACAAATATTCGAGAA
ACACTTAATCGGAAGTATTTCTTTACATCGTACCGTTATTGGACCTTATA
TGCGACCCACATTGAAAGATGAAACGGTTTCAGCGTGGGAGAAAATGATC
GTGTGTCCGGGAGAGGAGGTGAAATGTATTTGTAATTTGTATCATTGATG
AGAGTCTAAGAAGCCTTTGTTTTTGTTAAAGCACAAGCATTCGAGTATCT
TCgcaaagagcccccccc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001007TCONS_00001007Clytia hemisphaericatranscript
TCONS_00001008TCONS_00001008Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001007-proteinTCONS_00001007-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:645945..649312 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.36	0.33	0.68	0.93	1.67	1.1	1.41	1.46	0.8	1.43	0.87	0.82	10.32	11.74	3.02	5.33	3.48	4.85	29.7	32.08	4.61	6.39	3.23	4.12	10.05	10.42	112.61	126.15	4.83	4.69