XLOC_000578 (gene) - C. hemisphaerica

Overview
NameXLOC_000578
Unique NameXLOC_000578
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000007:393757..403713+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000578 ID=XLOC_000578|Name=XLOC_000578|organism=Clytia hemisphaerica|type=gene|length=9957bp|location=Sequence derived from alignment at sc0000007:393757..403713+ (Clytia hemisphaerica)
TTTCCATATTTTCGCTTTGTTTTAGATAATGAGTCTCAATATTTGAGCAT AAAAATCTCCACTTTTGCTtatatttgaatctttttttctcACCAGTACA AAATAAATTATAACAACAATATTACATAATGgcaccaaaaaataagaatg atGCTGGATCAACTTCCTGGAGATCTGAAGACGAAAAAGAGAAGGTGCAG GCAGTGGTGATTGCTGATTCATTTAACAGAAAATTTACACCAATCACACA AGAAACACCAAGGGTattatattcattgaaaatttgaaatcgatgCAATG TCCCATGGCATATTATTTTGTACTGTGTTAAAAGAGTATCCCTGAAGCTC AAAAAAGCATTTTCGTCTCAAATTCAGCTAAAGTTAATGAAATTATCATt aagaattttggttaattttttGTGTAAAGTCTAATTTCTGTCTCTAAGAA GAAAAATTGCCTTTAGACTGATGCTTATATTTTAGTAATatgattttgaa acttttttgtccGTTCTAGGCATTGTTGCCACTAGGGAATAAAGTGCTGA TAGATTATACGATTGAGTACTTGATGAATGCTGGAGTCAATGAAATTATT GTGTTCTGTTGTGCTTTTGGTGAAAGAATACGAGAATATGTTAAGTATGT TTACCTTATGTATGTTTACTTTGTACTAAAATGccaaattttaattcact taGAGTGCTTAATCTGCTTACCTGCTTACCTTTTCAACCTGCTTACTCTA TCCATCATAGCTGTCTTGAGTTCTTCTTGAAGCAAGCCAGTGTCAAAAAT TGCttccttaaaaaaaattagggTAGGATTTAaagaatattatttttttc atcttagtAATAATTGGAAACCTGACAAGAATTTCACTATCAACTGTGTA TTATCTTCTGTAACAGAGTGCATTTCTCTTGGGGATGCTTTACGTGAAAT TGATAgagaagtaattcttttcatAATGTTTTAATGTCTCATATTTTGTA ATCAGCTGCATTTATGAAAATCTAGTGTCTCCAAAGGCTTTTGATCTTTT TATTCATCTCTTTGCATTACTATTTGCTGTAATTTCAGGGCTTGATTCGT TCAGACTTTTTACTGGTTCCTGGTGACTTGATGTGTAACATTCAAATAGA AAACATCCTTGAACACCACAAGTAAGTATGAGTCTGGAAAAGCCATTTAC TACGAGACTTTGCACAGACTAGTGAGTAATGGAAAAAAATCAGTTTCCAC CCATTGATCGGTTTCATTTTAGGGTTcaacgaaagaaagagaagaatcTG GTGATGACCATGTTATATCGTGAATTAGCTCCTGGTCATTTCAGTAGGTG TGTTGcaaatgattttttctttctttaaaaacatattAACTTGGTAGCAC AATAAAAGGAGGGAAtcactttctttctttctatGATGATATTCTTTACA ATACATTCAGGTGCAAAGAAGAAGATGCATTCATCGCAATGGATTCTGAC ACACATCAAATCGTTCAATATCAGAAATCTCATGCATGCACATCATTTGA TCTTTCAAATGTAAGTTGATACTTTCCCAGTCTctatgaaaattttccag ataTTCACTTTGTTTTGGTAGTGAGTATGATTTGTGCATTACAAAATGac gaattttctttcttctcttaGAATGTTTGGATGAATGGTCGGGACGTTGA TATTCATTACAACCTCAGTTTCACACATGTCGCTCTCTGTTCACCCCAGG TATAGTTTATGTTTGTAAACGTTCTTGTGTTTAAGCGGTTGTAATTATTT TCACCGTGGAAACGCTACCATTTTAATATAAAAACCTTGTTGAAATCAGA TATCAGAAGAACATATTaacattgtttttcttttctttacttGATAGTGA AAATGATGGATTTCTTCTTTGTTCACAGGTGGCACCTTTGTTTACAGATA ATTTTGATTACCAAACACTGGATGATTTCGTCAAAGGTGTTCTCATCAAC GAAGATGTAAGATTAATATTGAAACTAAATTATGATTACATTTTGTTAGT CTATATCTGTTATATTCTTTACTCATCAGAAAGTCTTTAGACTGCATGCT TTGTATTAGCCCAATTGCAATAATTTTGACTGCAAATGCGTTTTTGCAAG ATAAATGGATAATTTTAATGATGTTTTAGATCATGGGTGACAAAATCAAC GGAGCCATCATTAGGGAGGGATATTCATGTCGTGTCAATGATCTACACAT GTATAATGCTATCAGGTAATGAGAGAGACTGAGAGAAGCTTGAAATTTCA CTTGTAATATACATGTCTGGTCTATTGACTTCATCAATCTTTCTTCCATC GGTCGCTTCTCTTATTGTCCCAtaatgttttgtttactttcagTTTGGAC TTATTGGGCAGATGGACTTATCCGATTACAGTGGATAATACATCCTGTCC TTTGGGAAGAAATAATGTTTATATtcataatgacgtcatcgttgAAAAGT AAGCCtctaaaattttgatattaaaatgagttttaatttcgcttagTATT ACGTAGTTACTTGTTACGCAATAAACACTTAgagaaaatttcaagaattt ctttATTTGATTCTCTTGGTTGAATGTGCTCATAGCGTTCTGAAATACAG TATAACATGTATGTGTTTAATTTATTCGCTTTattattgctccggcctag gagcctttaattctctcttccgacaacaacggtcaagacatttttttttg tttatctaatccgatgatctattccgatttaataaaaacggattatctgg atttcgataacattgcgaaagtatttagaaaaagatggctgccgaaagtg ggcttAGCTGCAAATCTTCGTGAAAGAtagtgatcattttcatcattatt catgatgttttggacatgatttatgagaagtttgatgcatactggtctat aacaatgtggaaagactttggagaaattttggccgtgaatcgtcagctgc tcgagtgcttaaatcttgcatatgatGACTAACTTCTCTAGACTAGTTTT ATGGAcgcacaaaaccataaaactctgtaacttgacaatggaatgaaact ttcaaacacacatccattggaattcgaaagagaatactaaaattacaaca ttacagtgcaaatttgaaaacgatctgaacAGTTTTTGAGGTGTTATATG Tgatgtgtatggctgaaaatgatcctgtcctgttttgtattcatcatttt ttgactgggcgaccgttccttttgatttttcaaacccgacacagatattt tacaaacatatcactatgagaattcaataaaggatactaaaacacaattc ctgtgtaaatttgaacaagattggaaaagATTTCACAGtatttatggctg aaaatgagcgtttttggactttgttgtaatttcattgcggctggcgaccg ttccttttgatttttcaaacccgacacagatattttacaaacatatcact atgagaattcaataaaggatactaaaacacaattcctgtgtaaatttgaa caagattggaaaagATTTCACAGtatttatggctgaaaatgagcgttttt ggactttgttgtaatttcattgcggctggcgaccgttccttttgattttt caaacccgacacaaatattttacaaacatatcactatgagaactgatgag aattcaataacggatactaaaacacaattcctgtgtaaatttgaacaaga ttgtggactttgtcaaaatttcattgcggctggcgatcgttccttttgat ttttcgaacctggcacagatttttcacaaacatatcactatgagaattca gtaaaggatactacaacacaattcctgtgtaaatttgaacaagatcggag aaattttcactaTATTATCactgaaaatgatcatttttgaactttgtatc gtaccgtcaactgctccaacctGGGGcaagtgtacgcaacatgggacttg ttgatatctggtctgtattttcacttactgtaaaatcgaaagagaaattg tgtattttttaatatgcggtttattaaactcaaatctaatgacttttgag gttcggtgaaatgttGGTGGAATGGCcctcccatgttgcgtaagatagtc ccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgcaataga attattactttgctttctgatctgttctgattagcagtttgtgggcaacg ttctaacacaactaactcaacaagctcatcttttaatctcttaagccgga gcttccagcgcagctggtttatttgtttaaatttttgacTATCTTGATTG TACATGTGCTTAAACTCTCTAGAGATTGTACGTTGAAGACAAAAGTGTTG GTGGGTAAAGGAACCATCATTGGAGAAAAAACCCATATCACACAAAGTAC TATAGGAGCTAATTGTAAAATAGGTATGTCCGCAATATTATAGTTGTCGT TGTTTTTTGTTCAGCATTAAAGATTTTATTCATTTGCTCAGGTTACATAT GAGTGGTCTGAGTGCAACTTGAGAATAATTATGTataaaaaagttcatta tttttataagagtCAGGGGCCTCGTCTTCAAAGTGTTTGCTTCAAAATAA TTCTGCGCCATACtaagtttttgtaaaaagtctTTAGGCTAGTTATCTAG TTTTCTCTTGATTTCAGGAAAAAATGTGACTATAAAAAATTCGTATATTT GGGATAACACTGTGATAGGAGATGATTGTTACATTGTCCAATCAATCATT TGTGAAAACTGTCAAATCAATAGGTTGGTATACATTGTTTAACCCATTAA ATGCCATCAATTCAGACTTTCAAGTATTTTTCGACGTCAAATGCGCGTAC AGATTCTTGACTTAGTTTTGTGCTCGGGTAGGGTCAAAAATGGGGTGGGT TGGGTTGCAGGGCTAAGGTACAGATCCGAAAAACTGAACGATCTCATTAT GAAGCCAGTGACACTGAATGTTTTAATCCTACCTTCTTTTTGCAATAGCC TACGTCATAAGGACATAACAAACAAAATACAAACGATGctttttcaatga aatgaaattcTTAAAACTCTTCATTCTAGAAATGTAAAAATGGTTGATGC AATGATATCTTATAACGTgagtaaaatttttctcaatCAACAATATTAAG TTTTGAATTGAACGATAGAATTCATGGTAAAAACTATACTTTACTTGTTA AATAAACCAACAAATCTTGCATTAAAGTGATTCTTCTGCTCCTTTAAGTG TAGTCAAATTTGTGTCATTCTTGCGCAGGTTTGCATTGATGAAGGAATGG AATTGAAACCATGCACGCGGCTTTCACTAAAGAAACCAGATTCTGATGGT TTCGgtgatgacgatgatgatgacAGTGACATcgatgaaaatatgaaaaa attgaaaatccaaGATAAAAAAGGTCTGCTCAATCTCTTAatattttgtt ggttgatattTTCTAATACTAGTCTCCAAATTACTAGTTATCTGCTTTGT TTGGTCTTGGTCAAGTTAATTTCctcaaatttgtattttctgTAGCTTTC AAGAATTAAGGATAGAACATAACAAACTATATTATACTATTGTATGATTT CAGATTATGATATCGAGATTGTAGGTGCGAACGGCAAAGGGTTTTTATGG CCTTATGATATGGAAGTAGAAGGAAATATTCCAAGTCTTACAGGTACAAG AACTAGTTAGTTAGTTGAATCATACTCTCTTTCCTTGTCCATACAGTTCA CAGACTGTAATATCAACGATTTTCTAAATGCTGAAACAAATTTTCACACC CCTTATGAACCGTTTTTAAGTACCCGTTTTCGAAAAATTCGTCTGGTCTG CGAAAAAGTGTTATAGTCTTGAAGATTAGAACTTGGTTAAGGATTGTAAG TGATCGCTGTACACGAAAAGCATTAAACAAACCAACCATGCTGACGTTTT AGGGAACGACTACGAGACATCAGATGGAGAGAGCAAcagtgaagatgaag atgaagactCCACACCAAACTCTCCACAACCTGAACTCTCCAATTGTATG CATCTGTTATTTGGGGGAATCTCCTCATCGACTTCGCTGACCTTTCCCTT CAAGTTTTTGATTTCCaagaaaattcttttcaaagttttgcCTCTGTTTT GCCTTAATTCTTTTTATGAGcgtttttcaacattttttttaattcatcac TGACATTCTTTTTCGACTCCCTTAATTGGAATTCATAACATATTTTCTTT TCGTTTACATAATATGCACTTTCTTCGCAAGGTTGCAAGAGAGTCAGAAG AGTTTACAACTCCACTCCAGTGGTCATTTAACGCTCCGTCTGTAGAAGAA CCTTCAAATATATTTCTCCTTCAATTTCACTTCACTTGCTCTTTAGTGCA CCAATTCCATATAGAGGTCGTGGAGAATTTGAAAAGCGGCTACCTCGAGA AAATTGCTGCTGATAATATTGCCCTAGAAATCAATGCATCGAAGTAAGTC CCACAAATTTATTCGAGACcttaaaattttgagattcgCTGCTGGTGAAT TTGATTGGCTTCCACAATACCAAAAACgtatgaaaaattcttttctacGT GAAGACCTGAAAAAGACTGTCTCATTATAATCTGCAGCAGAATAAAAAAT AGCTATAACTTTTAATAGAATTTAAATTGGAAAGCGGTTTTGTGTTCGTC GAAAAGATAGTCAAGAGTGAAATGTTATCACATTTAAAAAAACCCTCTta tattttatgacttttcgatcacttttaaaggttttatgaGGTGTGAGATT TTTTGCCCACTCCCTCCCAAGATTATTATTCCCAAGAAGCCTGGGCTCTA TTGTTCGTATTGTTAGAATATCTGctttttattggacctaccccggtgga ggtcctataaattaacctctgtgcgttcgttcgtttgttcgttcgtttgt tcgttcgttaccaacttttctcacttggctcattagttttttctgatttt ttgcataaagatgtgtagctataaaccctcgaatgtgacggagcccgatt ttcgaaaaaaaaattttttgggcaaatttgggccaaaaaacggctaaaaa atgggtattttggactttgttataaattgcatcattaattttttctgatt ttttgtatgaaagtagggtaccatcataggtaaaagatggctcaagcaga ttttcgcaaaagaattttgttgactcaaaaaacgcatgtttatctataag aatcactattaataagcatacatcaatgttcttagtcaaattactcaatt tttttatgagacagatgtttttttgctcatgagggcttacttttaaagaa tatgtgtgtttagacataaaattttgtttgcttggcgtgattttattgaa aaactggccaaattcgctatttttttataagcacattatcaataacttag gtattagcttttctcgagattggctgttttattctttatgatatttttgc acaaagatgcataactataaaccctcgaatgtgacggagctcgatttttg agaaaaaatttttggggtagatttcagctaaaaaacggccaaaaaaagag tttttcgGACTTCGTGAAATAtttggatcgttgtttttttctgatttttt gcatgaaattaggtaaaagatggctcaagcagatttttgtaaaaaaaatt tttcagctcaaaaaacgtatctttatccataagaatcactattaataagc ataaattaatgttcttagccaaattggtcaattttttgaaGAGATGAATG tctttttgctcacgaagtcttgaatatgaaagaatatttcacgagcatga aattttagtttctaaatgttttttttataagaaacaaatgacttatttta atagatcgtcaatatttgtgttctgaatgattgtttaatggtcacgtcac gtagatatcaattataaatgtgttaaatgcttaaccaggtaggtccataa aagtatcacttgtttttctcTAGGTTCAAGTTCAACATCAGTATACCAGA GCTTTGTCAGACGGTAGCAAAAGCATTGCTAGAAATGTGTTTGAAACACG ACGATACTCCAAAAACTGAACAAGTTAAAGAGTTTGGAAAGGTAAGAAAA TATACCTTAAAATGCTATTCATAGAATACCTCTTGGGTGAATTTGACTGA AAATGAGTGTTAGTTgttggagttttttttttttataaNAGTTTGGAAAG GTAAGAAAATATACCTGTAAAATGCTATTCATAGAATACCTCTAGGGTGA TTTTGACTGAAAATGAGTGTTAGCTGTTGgagttttttttatatagaaaT CATTCCTTTTTCAGATCACCAAAGGTTTGCATCCACTgttattgaaatat ttcaacacTGCAGAAACACAAACATACGCTATAAACTCCATAGAGGTATA ACCACAAACTTCAAATCTCTGTTAGATTCAATCTTTACATATCTACAGTT GGTTGTTCCTtctgtattttaagaaataagatACCGTGCAATAAATAATA TTTCTATTCCAAGGGCATTGGATGACtattaaatttgatattttgtagGA GCACTTTTTGACGTCTATCGAGGAAGTAGCGTATTATGTTTTACCATCGA TCATCCACAAACTATATGATGCTGACGTTTTGGATGAGGCTGTCATCTTG AGGTGGTATGCTTGCCCTCATGAAATCAGTGACGACCATATCATCATCCG TGAAGAAAACAGGACTCTGCTACGAAAAACACCTGTAAGTGAAGTGATTT CTATGAACACTTGCCTCGGTTTTATACTTTACTTTGTTGTAAAATCCTAT TCTTTgccacggcatgacgtcagaactggagtacaacagaacacttacta aagattaattatgtgttttcagtaaacataatctttcagtgagttaaacc atagtgtttgttttaccctcgaaatttttaaatcttattggttgaaaaag atgtcacaCGACTTTCCGTGGCAAAAATCGTTAAAATGTTGACAAAGGTT TTTAAGGAGTTATGGATTAcctttttgattaattttgtaCGATGTTAATT TACACCATTCTCTCTTACCTTCACCATCAGAATTTGTTGAAATTCGTGAA TTGGTTACAAGAAGCTGAAGAAGAGGACGACagtgatgaagaagaagatg aatgAGAAACTATTTTTTGAGTAAATCGTATTTTTTATGTCTAGATTTTT ATTTaagatgaattttcaaaatagaaatagTTAAATAACAAATTGAATCA TTTTGCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000993TCONS_00000993Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000993-proteinTCONS_00000993-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:393757..403713 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
EIF2B5translation initiation factor eIF-2B subunit epsilon Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.94 14.11 3.34 2.06 21.55 18.81 24.98 25.02 18.17 20.37 18.29 13.74 12.93 16.32 18.12 21.45 20.74 21.02 8.94 7.58 10.92 11.07 25.74 22.77 24.4 25.83 10.98 11.01 18.15 17.18