TCONS_00000993-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000993-protein
Unique NameTCONS_00000993-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length698

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000993-protein ID=TCONS_00000993-protein|Name=TCONS_00000993-protein|organism=Clytia hemisphaerica|type=polypeptide|length=698bp
MAPKNKNDAGSTSWRSEDEKEKVQAVVIADSFNRKFTPITQETPRALLPL
GNKVLIDYTIEYLMNAGVNEIIVFCCAFGERIREYVNNNWKPDKNFTINC
VLSSVTECISLGDALREIDREGLIRSDFLLVPGDLMCNIQIENILEHHKV
QRKKEKNLVMTMLYRELAPGHFSRCKEEDAFIAMDSDTHQIVQYQKSHAC
TSFDLSNNVWMNGRDVDIHYNLSFTHVALCSPQVAPLFTDNFDYQTLDDF
VKGVLINEDIMGDKINGAIIREGYSCRVNDLHMYNAISLDLLGRWTYPIT
VDNTSCPLGRNNVYIHNDVIVEKDCTLKTKVLVGKGTIIGEKTHITQSTI
GANCKIGKNVTIKNSYIWDNTVIGDDCYIVQSIICENCQINRNVKMVDAM
ISYNVCIDEGMELKPCTRLSLKKPDSDGFGDDDDDDSDIDENMKKLKIQD
KKDYDIEIVGANGKGFLWPYDMEVEGNIPSLTGNDYETSDGESNSEDEDE
DSTPNSPQPELSNLHQFHIEVVENLKSGYLEKIAADNIALEINASKFKFN
ISIPELCQTVAKALLEMCLKHDDTPKTEQVKEFGKITKGLHPLLLKYFNT
AETQTYAINSIEEHFLTSIEEVAYYVLPSIIHKLYDADVLDEAVILRWYA
CPHEISDDHIIIREENRTLLRKTPNLLKFVNWLQEAEEEDDSDEEEDE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000578XLOC_000578Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000993TCONS_00000993Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003307W2_domain
IPR029044Nucleotide-diphossugar_trans
IPR005835NTP_transferase_dom
IPR001451Hexapep
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0016779nucleotidyltransferase activity
GO:0005488binding
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009058 biosynthetic process
molecular_function GO:0005488 binding
molecular_function GO:0016779 nucleotidyltransferase activity
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003307W2 domainSMARTSM00515542_3coord: 591..689
e-value: 7.6E-14
score: 62.0
IPR003307W2 domainPFAMPF02020W2coord: 604..693
e-value: 7.4E-15
score: 54.7
IPR003307W2 domainPROSITEPS51363W2coord: 497..693
score: 23.146
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 12..296
e-value: 5.4E-32
score: 110.7
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 338..388
coord: 23..296
IPR005835Nucleotidyl transferase domainPFAMPF00483NTP_transferasecoord: 34..169
e-value: 1.1E-8
score: 34.8
NoneNo IPR availableGENE3D2.160.10.10coord: 300..433
e-value: 5.4E-21
score: 74.1
NoneNo IPR availableGENE3D1.25.40.180coord: 516..695
e-value: 7.0E-32
score: 110.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 479..511
NoneNo IPR availableCDDcd04197eIF-2B_epsilon_Ncoord: 23..235
e-value: 9.34382E-72
score: 232.884
NoneNo IPR availableCDDcd11558W2_eIF2B_epsiloncoord: 515..684
e-value: 2.01369E-36
score: 133.923
IPR001451Hexapeptide repeatPFAMPF00132Hexapepcoord: 349..379
e-value: 1.0E-4
score: 21.8
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 517..687

Blast
[Close]
BLAST of TCONS_00000993-protein vs. Swiss-Prot (Human)
Match: EI2BE (Translation initiation factor eIF-2B subunit epsilon OS=Homo sapiens GN=EIF2B5 PE=1 SV=3)

HSP 1 Score: 404.06 bits (1037), Expect = 3.906e-131
Identity = 242/697 (34.72%), Postives = 386/697 (55.38%), Query Frame = 0 
Query:   17 EDEKEKVQAVVIADSFNRKFTPITQETPRALLPLGNKVLIDYTIEYLMNAGVNEIIVFCCAFGERIREYV-NNNW-KPDKNFTINCVLSSVTECISLGDALREIDREGLIRSDFLLVPGDLMCNIQIENILEHHKVQRKKEKNL-VMTMLYRELAPGHFSRCKEEDAFIAMDSDTHQIVQYQKSHACTSFDLSNNVWMNGRD-VDIHYNLSFTHVALCSPQVAPLFTDNFDYQTLDDFVKGVLINEDIMGDKINGAIIREGYSCRVNDLHMYNAISLDLLGRWTYPIT-----VDNT--SCPLGRNNVYIHNDVIVEKDCTLKTKVLVGKGTIIGEKTHITQSTIGANCKIGKNVTIKNSYIWDNTVIGDDCYIVQSIICENCQINRNVKM-VDAMISYNVCIDEGMELKPCTRLSLKKP--DSDGFGDDDDDDSDIDENMKKLKIQDKKDYDIEIVGANGKGFLWPYDMEVEGNIPSLTGNDYETSDG-------------ESNSEDEDEDSTPNSPQPELSNLHQFHIEVVENLKSGYLEKIAADNIALEINASKFKFNISIPELCQTVAKALLEMCLKHDDTP--KTEQVKEFGKITKGLHPLLLKYFNTAETQTYAINSIEEHFLTSIEEVAYYVLPSIIHKLYDADVLDEAVILRWYACPHEISDDHIIIREENRTLLRKTPNLLKFVNWLQ 684
            E+    +QAV++ADSF+R+F PI+++ PR LLPL N  LIDYT+E+L   GV E  VFCC    +I+E++  + W +P     +  + S +    SLGD LR++D + L+RSDFLLV GD++ NI I   LE H+++RK EKN+ VMTM+++E +P H +RC E++  +A+DS T++++ +QK+     F    +++    D V++ Y+L   H+++CSPQVA LFTDNFDYQT DDFV+G+L+NE+I+G++I+  +  + Y  RV++LHMY+A+  D++ RW YP+T      D+T  SC   R+N+Y   +V +     L+  VL+G GT+IG    IT S IG  C IG NV +  +Y+W    +     I QS++C+N ++   V +   ++++  V +   + L   + +SL  P  + D    +  DDS  D+   K+K+   K Y+   VGA GKG+LW    +  G          +   G             E + + E+ DS   SPQ  + ++  F  EV+  L+ G  E I+ DN+ LEIN+ K+ +NIS+ E+ Q ++  +LE  L+  D+P   +        + K   P+   Y   A     A+ +IE+ FL    E     +  ++   Y  ++L E  IL W++   + +D            LRK   L +F+ WL+
Sbjct:   37 EEPPPPLQAVLVADSFDRRFFPISKDQPRVLLPLANVALIDYTLEFLTATGVQETFVFCCWKAAQIKEHLLKSKWCRPTSLNVVRIITSELYR--SLGDVLRDVDAKALVRSDFLLVYGDVISNINITRALEEHRLRRKLEKNVSVMTMIFKESSPSHPTRCHEDNVVVAVDSTTNRVLHFQKTQGLRRFAFPLSLFQGSSDGVEVRYDLLDCHISICSPQVAQLFTDNFDYQTRDDFVRGLLVNEEILGNQIHMHVTAKEYGARVSNLHMYSAVCADVIRRWVYPLTPEANFTDSTTQSCTHSRHNIYRGPEVSLGHGSILEENVLLGSGTVIGSNCFITNSVIGPGCHIGDNVVLDQTYLWQGVRVAAGAQIHQSLLCDNAEVKERVTLKPRSVLTSQVVVGPNITLPEGSVISLHPPDAEEDEDDGEFSDDSGADQEKDKVKM---KGYNPAEVGAAGKGYLW----KAAGMNMEEEEELQQNLWGLKINMEEESESESEQSMDSEEPDSRGGSPQ--MDDIKVFQNEVLGTLQRGKEENISCDNLVLEINSLKYAYNISLKEVMQVLSHVVLEFPLQQMDSPLDSSRYCALLLPLLKAWSPVFRNYIKRAADHLEALAAIEDFFLE--HEALGISMAKVLMAFYQLEILAEETILSWFS-QRDTTD--------KGQQLRKNQQLQRFIQWLK 711
The following BLAST results are available for this feature:
BLAST of TCONS_00000993-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EI2BE3.906e-13134.72Translation initiation factor eIF-2B subunit epsil... [more]
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