XLOC_000452 (gene) - C. hemisphaerica

Overview
NameXLOC_000452
Unique NameXLOC_000452
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000005:878205..883750+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000452 ID=XLOC_000452|Name=XLOC_000452|organism=Clytia hemisphaerica|type=gene|length=5546bp|location=Sequence derived from alignment at sc0000005:878205..883750+ (Clytia hemisphaerica)
GAAGATCCCAAAATCTGGTAAGCATTGTCGAGAATAACACAATCTTCAAA GATAAGGTAAATTTTTACATTCTTAAtgctctttatttttttttttggca aaggTTGATTTTGCAGGATTTGAATTTCTTGGTTGAGAACATCCGCAAAA TCTTAAAAGGGGTTTAATTTAATTATTCATTCATAGagttatatttcaca ggtctatcgacctctacgaaataattttagatttataaaatattgtctaa ttcttcatctcgtccagtcgtcagaagatatggacagagaagacgttgtt tcggtctttgtcctaggttttctaactaggcgaaggtttgttctagggct tcctcttacatgccaagcgaaatcatcatttttttaattcatttttttcg ccttttggcacatatctttaataatttttctttcgttgatggtgaagtcg tctgtaatgctaaagccaccaatttcGTTGAATCGTTTGtcagcttatgc agattttacATTATTCGATCTTTTTCCTCcatactttttaagatcaactt gatcAACTTAAAAAGtagtgttttgaattttttggacattttttggacat tttttcgAGAAAACCCTCTCtagattttgttttctttttccccTTCAAGT AGCTTAAAATCGCTTTTTCTCAACATTGTTATTTTACGTGACAtgaattt tctatattttcagTTTAATCATGGAGCAAATCACAGTGCCGTTATAGAAC TGATAGAATCAGATTTGAACCAAGTAGTAATTACATATGGTTATTGCAAT GAAGATATCGCTGGATTCTTTCTCATATTCTCTCCTTTGCCTGGTGCAAA CGAATCCAGTTGTGTTTTGCTGTCGATAGTGAATAATATTGATAATGGTT TGTACCTACCATATATATCAAAATCGCCAAAGAAGAAGATTGTTGTTTTA TTGCAGTCAGATTTCCTTCAAATACTCTTATTAGAATTGGATCGGCTTCT ACTACAAGGATTAAAATTATATNTCTTCAATTACTCTTATTAGAATTGGA TCGGCTTCTACTACAAGGATTAAAATTATATTTAGTTGGACTAACCAGAC AAGAACTATTGAGATACAGAAaagattttcctttctttaCGTTGGTGCCG TACTCAAATGAAGAATTGACTGACAATAACAACAGTTTATTAGCAACATT CTCCAATTTTACTGAATTTCAGTTTAAAAGGTGAAATACTTTTTGTTCCT GTTAACGTATTCCATTTCACTCGCAttgtttttaaaactaaaatttttcc CATCGATCAACTGCAActttaaaaatgtaaatttgTGATTGAATTGAATC GACACGAATTTTCACACCGTTATGGAAAGCTCAGCTTTCCGAAACACGGT AGACATTCTCGCAGAAAATAGGAGTGAAATTACCTATTTCATATACCttt ctgatatttttcttaGCCACTGTTTGCGAATTTTTGAAGATGATATAAAT CACCAGCCGAAGAAgctttcaacctttttttattAAACTAAGGCAGGTCT CCAGAACTTTAAGGTCTTTTTTAGACTGACATATCCATTTCACTTTAGAA CTTCAGTTATGGATTCCTTGGAAAGACATGCCAACATATATCAGAATGAT AATACTGGATCTTTTGAACGTGCTGTGAGAGTAGTTACAGCATTTTATCC ACCTTTTGTCAAACAAGTTTCTCCAGACATATCTAATGTGACAGGTGATT ACAAATGTGGGCAAGCAAAACTCTGTGAGGTACCAAAGAAGAATCAAAAC GGTACAGTAACATGGACAGTGAGCTGCTGTACTGGGTACATTGTCGATAG TTTTGAAATGGtgcaaagaaaattaaattttgagtaTACTCTTTATATTG TTGAAGATGGAAAATGGGGCACTTTGGAAAACGAAACTTGGAATGGAATG ATTGGTGATCTTGTTGATAAGAAAGCTGACCTTATTATCAATATCATGAC ACCTTTAGAAATACGAGCTAAAGATATACATTTTACTCACCATTTTATGG AGTCAAATTTCGGAATCGTTAGAGTCAAAGAATACAATAGTGATATTCCA AGCTTTGATTTTCTGAAGCCTGTTGGTGGGAACTTACATTTTGCAATATT AGCTTCGACTATCTTGACTCTATTGACGATTTCATTTCTAGAAaattact ttttgaaatttacaaaaaaacaagGAGTTTTCTTTCAAGAAACTATGGCT TATGTCTTTGGATTAACATTCCAAAGAGATATGGGTGGTACAAATCCTCG AATGTGGTCAGGGCGTCTAACTGCTCTTGGTTATGCATCTGCAATGACCA TCATTATGTCCGTCTATACTGCCAGAATCACTGCTAACTCTATTGGGCAG GTCGTTATGGATGATTTCAAAGGTTTCAAAGACAAAAAGGTTGGTATATC TTTTATTCCTAATAGATCCAGCCACGCCCAAGACTAATTTTGTTTCTATA ATTGTTTCTGTCAAAACTTTCTAAAATCGAGTATATAGTACCATGAActg attttctattttaaatgtCGATTTAGCTCAATTTTCCTAGACAAACTCTG TTTTTCAATCCAAGTGGCAATTATTACCCCAGTTGAACTTTATAATCCTT TTTGGATCCTTCCTTTCCAGCTTTGGAGAATTCTCTTAATTTTGAAACAC TTTTTATCAAAGTGATAAAATAGGGGTATTCTCTATTTTAGTTTCAAAAC CCATCTGAAGATTACAAATTTACTTTGGTTGGAGGTCAAGGTTGGGCCAT AGAGAGTTTCTTCAGAGATCATCCAGATGAAAGCTTTCAAAGAATGTACA AATTCATGtctaagtattttgtgaaaACAGAAATTGAAGGAGTGAAAAAG CTTTTGGATGGGTAAGCAACAAGTGTACAAAAATACACGTATTAATCCTA ACACTTCAAGAGCTTGAGTTTACATGGTTACTGTGGTTGAATGACATTCG GggtgggtacttaggcaaaaatgggtgctgcaGACCTGTCTGAAcgactg aatgatagaaaggtacccaattgtaaaatttcaaattaatcaagtaaagc agggccgaatttggaggttcttggatcactcgttgaccaaaaatggtgaa aaaactGTCCCGTTCggacatacccctcatccgccaaccctagtaccccc tcccccaggaaaaacgtcaaaatatattaaaaatttgACGTAACTCAACA CTGGTAAACTAGAACCCAGTACTTTTGATGCCGCTTTAAATGCAAGAGAG TTTGGGTTTATACCGAATGTTTTATAGacaaaaaaagaagtttttgcGAA GGAATTCTctggagagagctttttttcttgaaatgcGTGATTACTGTGAT TCGTACCTGTTACATCTAACTTCGTTTTAATTGAAAGGAAATAAtgataa cttttattttattcttctttGCAGCACCATCCAAGCCTATATAGCTGATA GTGGTTCATTTCCAGTCGTTCTACAGCGAATCACTTCTGAATTAGGCTGT CCTAAAGAAATTGAGCTTTTAGAAGAAAGCTTTATCGGAACACATGGACT TTCCTTTGCATATCGTAAAAACTTCCCTTATGGAAAAACAATATCAAATA CTTTGCTTGGTCTTTACCAGACAGGCGCCTTGATTCGATTGAGAAAGAAA TGGTTCCCAAGCTCTCATTGCAAAGGAAAAACACCAGTACAGCAATTTGA TTGGACTTATTTTTCCGGTATTCTGGTCATCGTTGGCTATACTGTTATAA TTGGAATATTTGTCAACCTTATTGAACATTTTTACATGTTTCTCAGAAAA ATGTACAAATCAAAGTCTGCTGATCTTACAGAACAGAAGAGGTCCACAAA GTACACCGAAACAAacatttgaatattttgaaaatatatgtTAAATAAAA ATGAGTGTTAAATAACAAATGTTACATGGATGAGATTCGGTGTTTTTTTG TTAGCTAGGTCGATCTAAGTTTTTCTGCAATCCACatagaataaaaatga aaaaccaaatcaaaatgaaaatttttgtcagaaTAAAATGGAAGCTTACA AGAGTACGTGACTATAAGTTTGTTGAGTTTTGCTATATATAACatacaaa ataattttatcaaTGTTTGCAAATCAGAATAATCAAAATCGAAAGTTTGG CTGATGGTATTGTGGGGTGTTTTTTGGAGTCTGGGtgaaattatatttta tattcctatctaaaatattccaaaaaatagctagaatataatttttttat atcaaaaaGCTACTTTCCAGAGACCATCGACTGTATTAATGtatgtaaaa tatattttttctacgTTTATCTACACAAGCAtctaaattttctgaaaatc aaattttaaattaaaatcaaCATCATTGACAGGGTATTGTCTTGCGAACA CACAAAGAAAAACCATTGATTTCGGTTTCGATATTCCTGTACACGACAAA CCATTTGATACTTTCTTCAAATTGAAAAGTGAAGTAAAGGTTAAGGTAAT GTTGTATGTCTCTGTTAAAGATATATTTACCACTTCGAATGCAATAGACA CAGGATGTCTTTTCATATCTCCCGCATCTGATATTTGCTCTATGGTGTAT ATTTTACGGACCAGTAATCCAAGACCTTTAGAATCATACTCATAGACTGC TTCATCGATATTATCTTTACCAAATATTTCATAGATCTGTGACGTTCTTA GTGAAGAGAGATCATCAAAAGCTAATTGATTGGTGGCTTGTTTTGATGAT TCCATATTACAAACACAAAAGCGAAATTGTTTTGGTGCGTCACTACACTC TCGATATTTACCAAAGGTTGATATACGATCGTATGATAATAGTTTCCCTT CATAGGTTTTCAAATGTTCAGCATTTTTATAACTAATTTCAGTACTAATC CTGTCTNTGTTTTCAAGTGTTCAGCATTTTTATAACTAATTTCAGTACTA ATCCTCTCTTCTGTATTCTTGGACCCTTTCCCAGGAGATGATGTTATATC AAACGTTAAAATAACACTTTCAGTTGTTTTTCGTTGCATTACGTTTTTAA AACTTGTTGGAACCATTCGTTTACATTGTCCTTCCAATGATACAGAACTA ATCAAATTGTTCACTTTCCCAAGAGCAAATTCGACAAACGACATTAGTTC TGTTGTGTTTTCGATTGGCGAGTCCCAACCCTGGCAAACACACAAATTTG GCATTGCCATTTCAATATCATTACACGTACGATTGGCTGGTACCAAATCT AAAAGCCCTTTCCTAAGGTGATCTTTCGAAATGAGTCTTTTAACCGTATG ATGAACATCGATTAAGTTAACTAATCTGTACTGATTCGCTTTCAAATTCT GGATTCCTCTTTTTCCAATAAGCTGTTGAACTTGCTCAGGTATCACCATG AACAATGTTGGATGGAATTGCTCATAACGACCATCTAATTCCTGGAAAAC ATAACTGGTATATGTATTACCATGGTCACTGAAAAATATAGTCAGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000718TCONS_00000718Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000718-proteinTCONS_00000718-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000005supercontigsc0000005:878205..883750 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 4.97 3.4 4.44 5.95 1.24 1.92 1.12 0.93 0.79 0.63 0.22 0.34 0 0.11 1.05 0.79 0.12 0.07 0.17 0.42 0.22 0.43 0.04 0.08 0 0