XLOC_000337 (gene) - C. hemisphaerica

Overview
NameXLOC_000337
Unique NameXLOC_000337
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000002:914724..922641-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000337 ID=XLOC_000337|Name=XLOC_000337|organism=Clytia hemisphaerica|type=gene|length=7918bp|location=Sequence derived from alignment at sc0000002:914724..922641- (Clytia hemisphaerica)
TTAAAATTCAAATTATAGAAAAATTAAACAGAAATAGAAGAATAGGTTGA ATTAGAATGGCATCAATATGCAGACGCATCAAAAGTAGTAAACATGTAAG TTTTAGTGTCCTGTTTTTCCCCAATTTAATAGAAATACTCTGTAAACACA TCAGGCAAATTTCCAGGCCTTTTGTGCTACCGGATAATGGTAGCAGGAAC TCAATCCTAATTTTTGTATATGAGGCCCTTATTAACAGAAAAAGCCCATT TGGAGGTTATAATTCTTTGTGTTTTAATAATTCCCAACTAATGACAGAGC CAACCAACTGAATTGACAGAGCATGGGTCGATTATTTTGTTCTTCGAGCT GAATTCAAACTTAATCTTTGAAATAAAATCGGTAGCAGCTCAATACCCTG GAAATTTGCCTGTATTGTGTGAGTACTGATATCCAGGCACTTAATGATTT TTGAATTTTTTTACTTGAGATTTCAAAGAATGTGTACAAACTTGAATTGA GATTCAGAAAAGCTAGAAATGTTATCTATCTAACGTTTTTGGTAATGGGA AAGGGAAAGGCTACCTTAAATTATAATCTCTCTCTGAAATAAATTTGGTT CGATCATTCAAAAGTTATGAATAAAGAAAATTATAAAAATTTCTTATTCA AAATGTAATTTTGTTTATGACTTCTAGATTTCTTTCTCGGCACTTCGGTA TTTATGTTCATCAAACATCCAACGATTACCGTGGACTGGTAACGAATCAT TGAAGCAAGATGATCCTGAAATGTTTACTCTCATTGAAAAAGAAAGGTCT CGTCAAGTTAATGGCTTGGAATTGATTGCATCAGAGGTATGTTTTTGATC AATGGATATTGATTTTTATCGTACATTTCTCAACATAGTTAATGATAAGA AGCAACATTCTTGACATTTCATATACTAAAGTTATTCCTAGAGAGTGATG GCTAGTGAAAAGTGACGAATCAAATGATTTTGCTTTCATCTAGTATTTTT AAAATTACCTCTCTGTCCCTCTAATTCAAACATCTCTTTCTATTGGCATC ACTCAAACCTTTCTGTAAATCGAATATAAATTCTTCCCTAACTCGAACAA AAAATTATTGGTATTGTGAATTTGAATGGATGTTAATCATACAGAATTGT ATTTATATTTCAGAATTTCTGTAGCAGAGCAGCTTTGGAAGCAATGGGAA GTTGCTTGAATAACAAATATTCTGAAGGTTACCCTGGTGCAAGGTAGGTT TTATCAAAATTATCTTTGTTTAAAATCCATAAACAGGAGTCCACAATCAC AACCTTTGACAATATAGATGGAAAGGTTAAAGCAACTTTACTGTTGATTT TTTTTAAACAAGGTCTGTTAAGAACAATTATGTTCAAATAGGTATGAAAG ATGTTTCAGATGTTATAATTTGCTAAAAAAAATTGACGCTGAAAGTAGGG TACAGAAATACGAATTGTTCTATCTCCCCAAAAATTTACTGTTGTATTGG AAAGTAGTGAAAATGACTAATGACTGGCCGCAATATTTTTGTTAGAAGGC CTAACTCTTACTGAATGATAACACATTTTTCCTCAGATATTACGGAGGGA ACGAAGTTATTGATGAGATTGAACTTCTTCTCGAGAAGCGTTCTTTAGAA GCTTTCAACTTGGACCCAAAAGAATGGGGTGTTAATGGACAAGTCTTCTC TGGTAAGGAGGTTCCCATGACTTTTTTTGTCTTCTTGATGACAATCCTTA ATGAAATTTCAAGATCTATCTTATTCACCTTATCAGGAAATTATAAAGAT TTTCGCCTTTAAGATTTCCACTTTCTATTACACTTTTATAGGAGCTGCAG CGAATTTTTCAATTTACACTGGAGTATTAAATCCACATGATCGTATTATG GGTTTGGATTTACCCCACGGTGGACAGTAAGTGTCTTCATTTTCAAATCA AAGATAAGAATTTTGGTCCTAAAGCCCCCATAATAATCGCTGTAGAAATA CCGAAATGTAATTATTATTGTCTTTAATAAATATCTATTATACTTTTTCT CAACTTTTAGTTTGTCCCACGGCTTCATGACTGATGCAAAAAGAGTTTCT GCGACGTCCAAATATTTCGAATCAATGCCTTACCGGTTAGACGTGAGTTG TGCCAGTTTCTATCCAAATTTTTAAGGAGTTTTGTGGCTAAAGCATCCTC TTGATTAGTCTAGTTAACTAAGCTCGTGTTCACAAGTCTAGGTAGGACCT ACGGCTTACGGTAACATAGCGTTTTCGGCGCTTTAAAAATATATTTTTAA ATTTACTCATTTTTTGGACCTACCGGGAGGTCCTTTAATTTGACCGTTGT CCGTTCGTCTGTTACAAGCTTTTCTCGGGATTGGCTCATTAGTTTTTTTT AGTTTTTTGCACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAT TGTGTTTGCTCAATACCAATAGTAAAATGTAGAACACCTACTTTTATCTG ATTTTGATCAACAGGTAGGTCCATTCAGCATGTTGCTTGTTTTAATTTGC TTTAGTAGTTGTGATGTTGTTTGGGGGGCATTATAATCTGTTAGATTACC TTTGCCCATTGCGGATTCCGTTATCAACAACTTGGTTTCTGCATTCAATT TTTTTTTATTTGCTTGGAATACTGATAGATACATACTAAACCAAGCGACT CGATTTAACGCGTTATTTCTTTGTCTCGTTTTCAGGAAAGCACAGGTCTT ATTGACTATGACCAAATGGAGGAACTAGCTTGTATATTCCGTCCCAAAAT CCTGATCGCTGGTACAAGTGCCTATTCAAGGCTAATCGATTATAAACGAT TCAAAGATGTAAGCTTTAAAATACGGAATTTCAAATTTGATTTAGAATAA ATATTAGGAATGTGTTTACTTTTTCATTGTTACTACTTTCAGTCAACTTT GTATTTTAATAGCAAAGCTTGATCATCTCAAAGAAATTGACATCTTTTTA CTCAAAAGCATCTTTATTGATAAATTTGATAACAAATTTTCAGCGTCCTA CGTTCCAAAGGTTAAGGGATGTGGAAAGAAGATTAAAATGATATTCATAT ATTTTTCATCCTCGTAGGTTGCCAAGAAGTGTAATGCATACCTTTTAGCT GACATGGCACATATCAGTGGTCTAGTTGCTGCAGGGGTAAGTTGCTTTTA TCCATACTCAATCCGAAATTAGAATATGAAATAAGAAATTTCGGCTTCGG ATGAATGCCAAGTTGCCAGAATAAAGTCATTTAAGATTTTTCCCCTCTAA TTAAAACGTGCTTATTTTGATGAGAATAATTTTTAGCCTAACATTTTGGC CTTTCATTACCATGCCGCTGTCCTAGGTGCCGTGTATGTCCTTTTTTAAC AAAAAGTAGCGCTTTGTCGATTCGATTTCGTTTTATTAATATAAAACGGC GCCCTGTATTAATAAGTATTTGCTGGGCCTTTATGTCGCTTTTTTTCTTG TTTCTATGTTTAAGAAAAGACATACTTTTAAAACATGTTTTTTTACTTTT TAGGTGGTACCAAGTCCATTCGAACATGCTGATATCGTTTCAACAACTAC TCATAAGAGTTTGAGAGGAGTCAGGTGAGCTTTTATGCTTTGAACGTACA TCATATTTTGTGGATAATTTGATTGTTTTAAAAACAGAATTCTAGATTTT TACCAGTTCGAACAGTCTTGTTAACAGTTTAAGTTTCTTGCTGTTTAGAA TAATGAGCAACATAATTTTTAATACGAAGGAATGTTGAACTTGTTTTGTT ATCACTGTTTTTTTGCTGTTTTTTTTTTTCAGGCACTCTTTGATTTTCTT CCGTAAAGGAGTACGCTCGGTCAACAAGAAAGGAGTGGGTAGGACTAATG ACTAACTTCCTGGCTAGTGTCTCGTTTTAAAGACAATTATTAAATCAACA TTGTCTTTTCATTAGTCCTTTATGTCTTGTTAACAGCCTCAGCAAACAAG GTCTGTGGAAAAATCCAATAGGCTAATCCAGAAAAAGTCTGTGTCCCCTA TGATGAGGAGGTGTGACGTCCAGGGTGGCGTGGAAATTAGAAAATCAGGG TTGTGATGTTTTTCAGATTGTAAAAATCCAGAGTGATCCCAAAATATGAT ACTGCATGGGTCGCGGCACTCCTAGGTCTCTACTGGCGGTATCTAGTAAA AATGTTCTCTTTCCTTTGTAATGGCCGTGTAAACAGTGAACAACATGGGG GATTTTAGTCGTCAAAAACTTGAACATTAATCTGTTTTTAAAGGGCTTAG TTATGGTTATAGTCAATCCAGAACCACTAATTCTTTATTCTGAACATGTC CTTTTTTGACCTGCGGTTTAAATGTGTTAACTTTTTTTGTCATAAAATTC ACTTCCTAGAAACACTGTACACGCTAGAGAAAGATATCAATGAAGCCGTC TTCCCAGGACTTCAAGGTGGACCACACAATCACTCAATGGCCGGTGTCGC TGTTGCCCTCAAACAGGTTTGTCCCTAGCAATATTATTGCACATGACACA CAGTTTCATCTGAGGTCATGACATCTCCTAGATAAGATCAATTTCCTTAT TAGAACAGGGCTACCCTAACCCGTTAAAATTTTATAACGTGGATTTCTAG ACAAAAATATGTGGACCATTTTGTTGCATCTCCACAAAAAGTCAGCAGTT TATCATGTTACATTCATTCCTTTATTTCTAATTTTCTTTAAAATTTATTT TTCTTTAAAAAATCAGAGAAATAAATTTTGATTTAGCTCTACCTTCCTTG GTATAGAGCACTTTGTCACCACAAATTACTAATGTTGTTGTTGTTTCTAA TTTTCTTCAAGTTTTCTTTCCAACGGCTATTGTATTGATAGTGTCATAAC CGAGGAATTATGAACGATCATGATAAGTCTCCATTATGTTTCTCATTTTA AGGCGATGAGTGAAGAATTCAAAGACTATCAATTGCAAACCATTTCAAAC TCACAAACAATGGCTGAAGAGATGGTCAAGCGTGGATATAACATTGTCTC TGGTAAGACAATTTCAGGCTCAAAATGAAGAATACACGGGTAGCAAAATT ATAGAAGTGCAGTCAAAACATGTGATTACTTAGACTGGGAATCCAGTCGT TTATAACGTTTTTGTTGAAAGCGGGAAATTTTTATGTCGGTATATGGTTA AAATAAACGACTGGGCTAAGGTGGTTTCCGTAGCTTACGGGAGTTCCAGC AGGGCCCGCAGATTTCTGCGGGGTGAGAAAACAATCATATACAACAAAAT ATATAAACAAATAAAAATTTCAACCAATGAGAATTTCTAAGTGAAAGAAA AAAAAAACAAACCAAAACAAACCAACAAGACCCTCTGAAAATGTTATCCA AAAACATGAAAAAAAAGAATTTTTATGAAAAGTTTGTTGTGCACAAAATA TTCCAGACGACTATATTGATGCTCCTGTCAAGTTTTCTACTTCCTATTTT TTACTGAGTTAAGTCGTCTAGCATGCTAGACTAGTGATTACTCGAAAATT TTCACGTGATTTTATTCCCATGTTACTTGTTTTACAGCTTACAATTAATT ATTTTATTAGTGTCAAAAAAATGCCGACCAATTAGAAATAGAGGTCATGT AACATGCATATTAAAACTTCGATTAGAAACGTGCCCTGACTTCAAACTTT AATTTTGCAACCCATGTATTCTTTCCTCTCATCCGTACTCCTTGCATGCC AATATCCTTTTCCGAAAATTGTGAACCTCCTTCACTAAAGTCCATTAACT ATATTGGTAATATATAATTGCCATCAGTTTTATATCTGGGTATGGATTTA ACAAAGCTGATTTTTTCTACCCCGTGAACATGAGAGATGATGCCTCCTTA TGGTGTACCAGCTTCAAAATGTTTGTTTGCATGCTGTGTGTTGGAGAAAC TGAATTCAGTTAATTGTAAAATTGTAAGATCGACAATCTTTATTGAGTTG AATGATGAGATAATGTTAAAAATGATGTTTGGTTATTTGACAGGTGGCAC TGATACTCATCTGGTGTTGGTTGACTTGCGACCAAAGGTATCTTTTCTCT TTATTTCTCATATCCCCGAACCTTTTGGATCATAGTTTTACTACACGCGA TCTTGTGAGATAAATGAGACATGGATGTGATACAGTGAAGTCTCCATAAC TCGAATACACACAAGGAACACAAATCTGTTCGAGTTAAGGAAAATTCGAA TCATTGAGTAAGGTTTATAAGGCGTTGTTAACTGAAGGGACCCTAAAACT TGTTCGTGTTGGAGACATTCGAGTTCAAGTGGCGCCACTGTTTACTGTTT TTCTGTTGGTATGCTGAGTATTTTCTAGTTGTTTCAATTTCTCAGTGTTT TGTTTTGTAAGGATAACATATTATTACGGAGAAATCACATATTTCAGGGA ATCGACGGTGCACGAACGGAGTACGTATTGGATCTTGTTCACATCACGGC CAACAAAAATACCGTACCTGGTGATAAAAGTGCAATGAAACCCAGTGGTC TTCGTTTAGGTGAGGAAATATTTCAATTTAGAAAACAATTGCTTACTCAT CATCATCAAATTCGTTCAATTCTAACTGTCAAGAAGAGTAAATTGTGATA CTCAGATATGTTTTTAACGTCAAGGTTAATTCGTGGGTGCTTTGATTTTT ATGATTTATCGTTTTTAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000568TCONS_00000568Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000568-proteinTCONS_00000568-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002supercontigsc0000002:914724..922641 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SHMT2serine hydroxymethyltransferase, mitochondrial isoform 1 precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
17.07 13.82 129.71 151.88 32.37 26.76 35.35 36.14 35.76 36.5 20.26 17.78 14.19 15.32 14.11 12.91 97.02 103.2 8.58 13.71 48.2 49.15 24.39 27.54 58.55 47.25 117.86 94.15 8.17 7.07