XLOC_000296 (gene) - C. hemisphaerica

Overview
NameXLOC_000296
Unique NameXLOC_000296
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000002:1189802..1194488+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000296 ID=XLOC_000296|Name=XLOC_000296|organism=Clytia hemisphaerica|type=gene|length=4687bp|location=Sequence derived from alignment at sc0000002:1189802..1194488+ (Clytia hemisphaerica)
CCTGAATCTTGGGGCGGTAGCACGGGGTCAAAAACCTTTCGTGAATCTTG GTTAAACTCAGAAATGTCGATTCGAACTTaaccaatcaaacaaaaacaaa gtaaTTAAAAAACTTCTGTTATTGCCCTATACTGCCAAGAcagttaaatg gaaaaaaatctacTAATATTCATTTATTATAATTTGACTAAATTCCAAAA TATATTCTACCTATCATGATTCTATCATAATGTCATATTAATCGAatgaa aagaaatcaaaattgaacataaaaatcaatcatATTTTAGTGATCAAAAT TGCCATCcccataaatttcaaaaatatttctaatattCCATCCTTAACCG TTCATCTCATTTTTTCTTTCCTGCTTCTGGCAATCTTGAAAACCCAATAA CAAACTTTTTCCGGCAAAGCTAACAAGATGAGTCTTATCATTTCATGCGA TGGGTATCCACATGCAATAGGGGCAACACCAAGGGTTCGAAGAGCTGATG CAACATAATCTTGAGGAGTCGGGATAGTGGGAGCTGGTCTCACTTTGGAC ATCTTAGAAGAAACATACATTGTGGTCAAAACTTGGTGATCGACGATCCC TTGACATTCTAAACGTAGCGTTTCAGCCATCTTCAATACAAATGATTTAG TAGAGGAATAAACATTTGCCATTCCAGATTTCAAGAAGACTGTTCCAGAC GAGATATGAACAATAGCGCCACGCCCTCTTTTGACCATTCCACCTTGAAG CATGTGTGTCATACGGACCACGTTGAACATATTTACTTTCATGATGTTAG AAAGTCGATCGTGATCCAAATCGTGGAGCATTTTCAAAGGGCCACCATAA GCCATTCCAACGTTATTGATCAAAATACCAATATCCAAACCATTCAGctc agaagccattatttcatAAGCTTTTTCATCGTCAATATTACAAaagtcat gttgaataattttcGTTTCAACATTACTAGATTCTTTGATTTCAGAAGCC AATTGATTCAACTTTTCCACATTACGGCTGATGAGAACAACATTGAGTCC TTTAGATGCAAGTTGTTTAGCATATTCTTTACCGATTCCATCAGTACAAC CCGTCACTACTGCCCATTGACCATATTCCTTCAAATTCTTACGAAAATAA GGGATGCGAGTCAAGTAATAAGTACGAACGATAAACCAAGTGTATGAAAC AATATGGTATACAATGTACATCAAACATAACCAGCCAAGATAGACCAAGT ATGTTTCTTCCATTTTCTTcctgtttttaattttatttatctgcaatgaa aacaaaaatattatataCCATGGATTCTTGcaccttttttttaaatacat tagatgcttttttttataagaatagtgtactttcgatgagggtcaagtat ttttaagaaattgccaaaattgagggtgaaatattcttaacgtattctta atttttcagactttttttacaaacatgagaaatgatcaatttgagagttt tgtacttttgaatgaacatttggagctaaaattacatttctgtcTAACAA AGTaagcagtttttttttattaaccaaatacaaaatgacagtattcttat caaattctgtgaaactcaccctgatattcttatagaagatattcttataa aaaaagcgtgtaaatctTTTCTGGCCTCATTTTGATGCAGAGCGGCCATC TCCAACTCTATACATAAATATATTCCCAAAAGGTACTTTTACTAAATTAA ATTATGGAAAGAAAATGCTAACGTTTAAAAGTTGTAACTTTCTTTTGTGT ATCATTATTTCAAAGATAAAAGAATGTGTGAATGGGTGAGTGGACggttg aatgaatgaatgactgGTTGgagaacgaacgaacgaacgaacgaacgaac gaacgaacgaacgaacgaacgaacgaacgaacgaacgaacgaacgaacga acgaacgaacgaacgaacgcaatcgaatggaaaaattgaaaaggaaattA ATCTCTTTTGCCCTTTGCATCGCTTCTGCTACTAAAAGTATATGTATGCA CCAAATTGCTGATTTTCTCCGACAGACAAATCATGAATAAACGATGGAGT TCATGAACTGGAGTACCGCAAGCTATGGGCGCAATGCCGATAGTACGAAG AGCTGACGACACATAATTTTCAGAAGTAGGTGTTGCAAAATCAGGATTTG CTCCAGTCATTTTTGTCGACACTTGCATAGTGGTGAGTACCTGGTGATCT ACAACTCCTTGACATTCTAAGCGTAACGATTCTGCTAGCTTCAAAACAAA CTGTTTGGAAGCCGTGTACGTGTTAGCCTTTGCACCTTTAAAGAATACAA GTCCAGACGAGATATGAACCATTGCGCCACGCCCTCTTTTGACCATTCCA CCTTGAATCATGTGTGTCATTCGAACAGTTGAAAAATTGTTCACTTTTAT GATGCTTAACATTCGATTAAGGTTGAATTCGTCAAAAGCTTTTAGAGGAC CACCATGAGCCATTCCAACGTTATTGACCAAAATTCCAATATCCAGATCC CTTAGGTCAGAAGCCATTGATTCATAAGTTTTTTCATCGTCAATATTGCA AaagtcatgttgaataattttcGTTTCAACATTACTAGATTCTTTGATTT CAGAAGCCACTTGATTTAACTTTTCCACATTACGGCTGATGAGAACAACA TTGAGTCCTTGAGATGCAAGTTGTTTAGCATATTCTTTACCGATTCCATC AGTACAACCCGTCACTACTGCCCATTGACCATATTCCTTCAAATCCTTAC GAAAATAAGGGATGCGAGTCAAGTAATAAGTACGAACGATAAACCAAGTG TATGAAACAATATGGTACGTGATGTACATCAAACATAACCAGCCAAGATA GACCAAGACCAAGTATGTTTCTTCCATGGTGTAAGCTTGTCTAATGTTTT ATTTAACTGTAACGAATAGAAGTATGTAatgcttttgaaaaaacaaacac ccctgtgtcacagacccgctgagtCCCCAGNAAACATAACCAGCCAAGAT AGACCAAGTATGTTTCTTCCATGTTCTTGctgtttatattttgttttatg TCTACAACGATAGCAAAATATAATAATCTCTATCTCGCACACTTACTGTC ATGCAAGCTTTATCAACCACGCTTTTAACTGAATTtactggaaaatttca aaacgaCTAACTAACCAGTTCGGAAAATTGCATAGAATTGCAGCACTCCG AAATTCCACAATTTTAGCTTTGTCAAATTCTACAACGTTAAATTTTGCAA CTTTTCCTgtccactgcaaaatattgcaaCTTTTGCTTTTGAAAAGGGAT CTCAAAACATGTAAACTtcgcttttttcgaaaaaaattggtcGGCGTTCA TAACTTTCAATTACAAGCTTTAAAATTGAAAGCGTTGCGTAGAATTACAG CGCACCCCTGGCGGAAGCGTTGCAAAAACCATCAACGTTGTGGAATATTA CAGGGCTGCAGAATTATGCAGTTTTCTCTTGCTGAACTGATGACCGTACA AAGGCTTCCCGAGCGATTCGAATAGCAAATGTTGATATTTCTAACACCCG ATTGTATGTAATCCATATTATCAAAAACGAAAGAGCACACGAGAATAAta ttggtcaattttagactaaAACTTGGAAGGTCAGCTTTTCGGAGTACTAA TATATAAATGATGTTTCGAATTAAAAATGATTAGATATTACAAGTATACA AAAATTAGcgagtttttattttcatgttaCTTTTAATAACTGTTCTATAA ATGGAATCACTTAACCACTCTGGTAAGCTGATCAGAATTAAACGAACGAA TTCATGAGCAGGATATCCACACGCAACATTAGTAAGACCAAGGGTACGTA AAGCTGATGAAACATAAGCATAAGCAGTTGGTGTTTTAAAATCGGGTTTA CTATCTGACATTTTCGTTGATACTTGCAGAGTTGTCAAGACCTGATGATC GACAATTCCTTGACATTCTAAGCGTAACGATTCTGCCAGTTTAACAACAA ACGACTTTGTGGCAGCATATGTATTAGCCATACCAGCTCTAGTGAAGACA GCTCCTGATGAAATATGAACCATTGCGCCACGACCTCTTTCGACCATTCC ACCTTGAATCATATGTGTCATTCGAACCACAGAAAACATATTGACTTTCA TGATGTTTGCCATTCGAGTTAAATCGAATCCATGAAAGAGTTGTAAATCG TAGCCATAAGCCAATCCAACATTATTGATCAAAATACCAATATCCAAACC ACTCAACTCAGAAGCCATTATTTTATAAGCTTTTTCATCGTCAATATTGC AAaagtcatgttgaataattttcGTTTCAACATTACTAGATTCTTTGATT TCAGAAGCTACTTGATTTAACTTTTCCACATTACGGCTGATGAGAATAAC ATTGAGTCCTTGAGATGCAAGTTGTTTAGCATATTCTTTACCTATTCCAT CAGTACAACCCGTCACTACTGCCCATTGACCATATTCCTTCAAATTCTTA CGAAAATAAGGGATACGAGTCAAATAATAAGTACGAACGATAAACCAAGT GTATGAAACAATATGGTACGTGATGTACATCAAACATAACCAGCCAAGAT AGACCAAGTATGTTTCTTCCATGGTGTAAGCTTGTCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000470TCONS_00000470Clytia hemisphaericatranscript
TCONS_00000471TCONS_00000471Clytia hemisphaericatranscript
TCONS_00000472TCONS_00000472Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002supercontigsc0000002:1189802..1194488 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
HSD17B3testosterone 17-beta-dehydrogenase 3 Homo Sapiens
HSD17B12estradiol 17-beta-dehydrogenase 12 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
44.68 44.55 16.09 11.85 8.84 6.22 8.55 8.73 10.48 11.88 7.43 6.13 6.38 6.44 9.5 9.41 11.26 9.27 3.76 4.7 5.65 5 22.64 19.91 3.89 9.8 6.58 4 16.28 13.75