XLOC_000286 (gene) - C. hemisphaerica

Overview
NameXLOC_000286
Unique NameXLOC_000286
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000002:953745..962472+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000286 ID=XLOC_000286|Name=XLOC_000286|organism=Clytia hemisphaerica|type=gene|length=8728bp|location=Sequence derived from alignment at sc0000002:953745..962472+ (Clytia hemisphaerica)
GGGAAAATTTCTCACCAtgttgtaaatttttgttgttactGCTGATGACT GCTGCAGACTACAGACTAAATATCTTCTCTCATATATCCATCCAGAATAC CAAAAGTGCAGTCAAACAACGATGGAGGTAAAGTTTTATTTAGTTCTGGC ATCCTGTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGTAT AATTTGACgaatcaacgatcgaaccaatctaaccaaatcaaacgcaatcg accgattgaaattcgattgtcaaacgcaatcgaatctcaatcatacgtca aaattctgggtaatattcgctTGGtgcgattgttgttcgactggttcgat cgtcgattccgttcgattgagatcatcTGGCTTTATTCATGCAGCttccc aacctcgtccccgtgtatcccaggctttatttacgttactgattgacgcc agagaataccctggtgttggctgatatgtgagttccccctctcagagggg ggactttttaaaacaatacgtcataaaaaaatctgacgttacaaagttaa actgcaatgcaatggtttcaaacccaggaacaaatgaaatctgacatttt gtttttgaattacgtaatcttacgcgttcaaaaaccagccaatgccaggg tattatctagcgctatcagtaagcatcaaaaagctgataatgcgcagggg GACGAGGTtggcagcttcccaacatccaagctctcaaacatcacaagccg aatgaaatacttccgatttcccgtagaaattatgggATGAACAATCcagg ggtcaatgaatcgacgatcgaacgcaatcgaacgcaatcgaacatcaatc gaacgcaatcgaatatcaatcgaatctgaaaattgcgNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNtgagattcgattgcgttcgacaatcaaa tttcaatcggtcgattgcgttcgatttggttcgactggttcgatcgtcga ttccgttcgattgagattgtctgggtATATAGACctacctaactcttcat acaaaaattacaggaaacgcatatttggactaaaTTACACCCTATGTATG CTGGACGCAAGCACTTCAGCTAACGTCCTGCAAAATCAGCtgtttgaagt ttgcaaaaaaaagccACATatcgtgaagtcgggtaacttgcatcagtgga gggaaacttgcatagccatcaaatcaAAACTGGTCGTTGGGTGTTGTTTA TTaagataaaaacggcaattatacaattattgctcttttcggcaaCTATG AAATGTTAAGTCAGCAGAAATGTGCTGTCCTTatagaggccccccagcgg tttgcgtgatggcgtgatgcgtgatttgggctcttttcactattttttgc ttgatgacaaattttagcgattttcgtgatgcatgatggagaattttttt ttgcttgatgacgtgattaggggtgccgctgggggtgGCGCTGGGGGTGG CGCTGGGGGGCCTCCTTAAGGGCAAAGATAAGgtgtttgaaaaatgtaaa attatatTGAGGGAAAGGTTTTTCAGATCTTTAAATgcgaccttttttta aagaggcagccatgttgaataattatttactccagcataaaaacaatgat acagccatgcataattactgtatcatgcatatttcaaaaattatgcatgg ctgtatcattgtttttatgctgtcgAGTAcataaccagacggtgtcaatc gaacaaatcgaacgctgaatcaatcgaatgcaattgaacgcaatcgaata attgtaattcgattgtcgaacgcaattgaattgcaatcgaatattaccct ggatttgctgttcgattgcttcgattacgttcgattgtattcgattacgt ttgattgttcgtttacgtttgattgatttaattgtattagattttattcc cTTTGGTATGGTACTTCAAGCACTCAGCCACCCAcactaaaaagctctaa cagagtgatccaatttaatttaatttaatcgcaattaAACATattgaaca taatcgtaatcaaacgaaatcgaagattaatccaatgtaattgacaatca atcgaaccaatcgaacatagtcaactatcaatcaaaCCAGTCTAACCTta cttgaacgcaatcgaacacaatcgaatattacccaggaatgggccgttcg attgagattcgattacgttcgacaatcgaatcgcaattatttgatcacgt tcgattacgttcgattgcgattttagtttgaagttgttcgattgacaccg tctggacataGTTATTCATCATGGctacctctttaaaaaaaggtctattt ttcaTTGCTCAATAAGATGAAAAGTTCTGAAATGATATgtaaaaagatcc tgcatcgatgccgaaacacagcttgaagaagaaaacagaacccccgttgt aagtttgtttacattatgACTCAATTTTgttatctgcatttccaacaaaa accagttgaaaacaaaactaaacgagacacagtgggcctacttattGGGA TGGTGTCAAATACCatgtgttcaataataaaatcaacttttctttccaaa aacagcaaaaattgctataaaacggcaattttcatttatttacttttttt acttttctgctgattcagcatgttatcgttgaaaaaattgcctttttCAG CAATAGTTGCCGAAAAGAGAaataattgccgtttttatcGTAAACACCCA ACtgatgactgaccaatcaaagcagcaaaatttcaaaacaagacaCTCTA CGTGTCCACCAAAGCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNCtccctttctttttatcattgttttagatta tgttttaagaatttctgtTGACTTATCTAATGACAagggaatcaaaatta aagttcccCTGCGCAAGCGTAACTGCGGCCTTTTTCTGACCGATCTTGAC TTTGCTGGCGATCTTGCCTTAGTTTCTGAGAgtattcaaaatcttgaaag tcTTCTTCACTCACTTGAAACTTCGGCCAGTCAAGTCGGTCTTTATTGCA ATGCTggaaaaactgaatttatcAGCTCCTCTGGAAATGTTCTCCCTTTA ACTTCCAAGAATGGTGTCAATATCAAACTTGTGAAGGATTTCAAATATCT CGGCTCTCATATTAATAGCTCTgaaaacgattttaaaattaGGAAAGGTC TAGCTTGGAAAGCTTGTAATAAGTTAAACAAGATATGGCATTCTAATTTG TCTAACGCTCttaaacttcaaacttttaGAGGTCTTGTCGAGCCCATTCT TCTATATGGCTCGGAGACTTGGACCATGACAAAAACCATGCTGAAGAGCC TTGATGGCTGCTatacaaatcttttgaaaagagtACAGAATCTTGATTGA CGCAACCATCCAACCCTTCAAGAGATATATCATGGACTCCCAAGAATTTC CTCTGTCCTGACTAGCAGGATGCTCTCTTTCTCAGGTCACTGTTTCCGTG CGAAAAACGAAATGGTGTTCTTACATTGGTGTCCTGCGGGCCCAAGGCGC TCGAGAAAGCGcacttttcttgatattttgaaacgAGAAACAGGGCTAGA GATTGAGGAACTGGGCACTGCAATGGCTGATCGAGAACTGTGGAGGNNNN NNNNNNNNNNNNNNNNNNNNNNNNAAACGAGAAACAGGGCTAGAGATTGA GGAACTGGGCACTGCAATGGCTGATCGAGAACTGTGGAGGGagggttatt gtttgtttccgacctaggtccattcggacctaggtcgaaggatgatgatg atgaaaacaaatgaactacgcagcttcactcgcagctctactctatcata ttcgttttgatttaattttatattttaatgaccagccgggtcattcattt tagggctatgcatgttagcctccactgatacaAGTTACACGATCTCATgg tagaagatctttcaaattcagcatgtgaatagagcagtggggggagcagt aaaaaatacaacttttctattttttccctttttttttaagctctaggaat gaaaataaagggataatgataattgtatactatccactgatgatcaaTTG ATCAcaattttaaccaatcaaacacaatcaatGAAAAGAAACAATCATTG ATACTAAGAATTTTAGAATAGGTTTGATTACCTGTGGATTATTGGAATCA TTTGATATCAAATCAAAAGATTGGTTATTGATGAGTCATTGATTGGGAAA GGTTATTGATTGTATTTAGTATAGCTGGAAAATACTGTTTTTGCAATGAC TAGTCATCGACTGGAAAAGGTTTTTGATTGTATCGAATGGGAGAGTCTGG AAAACactatttttttaagtttgcaaaAGAATTGCAACATAGAATTGTTT TCAAATTACTGTAAGTGTTTGGATCAAgaaaataccgggtgcgccacaaa aaagtttctctctttaaaactaattttctcgaaatctaaaagttttaaac gaatcattcctatttcattagaaagaagaaagataaacttaaattttgat gggtcatttattaaattcgattcatcagatcaaaagttaggctcaattga atgaaaaagttattttcagaaaatgctcgaaactttgaaaatcgagctat caaattttattttaaaattagcAATCAccatagcctttacatgattaaga gcattttttcCGTAACTAAAcacttaaattttgaaactgaagggtcgaaa gggtttagaatcttcatcaaaatcattttaatttacttttaccgaaattt tcctcaaatcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNCCCCCTTTAGGGAAAAACAGTTGACCTCTTCA GTCTCAGCCCCCCcccagaaattaaaattttgtttccCTCTccccttttt ggaaaattttttttaaatctctaaCCCACCCTGTAAAAAAGAGACACTAT CCTAACCACTGATGATCCACGGTATTATTTAAAAGCTTTGATTGCTTTGT GCTCTCTTCGCTTGAAATGTTTGACAGATTAAAGATTGACCATCCATGAG AGAGTTCCTGGGCGTTTGTATTTGcgatgttagcttttttaggctcatgc aaataaatggatagaaatagaaataggaAGGTGTTTTCTTACATTATTGC AGGTATCAAATAAATGCATTATATTAGGGGCAAAACCACATTTATTTCAT TCGAAAGTTGAAtatatttgaagatattttcgcGAGGGGGTCCACTGGTC AAAAATCTTTTATAGGCCAAAGACTGACNattgaaacgaaaatactgatg catcatgtaattatgcttctgtttaatttgataggtctatttttaacgtt tttgggcACTTTCAGaaactaacttttttatttaattgagcataactttt gatctactgaatcaaatttaataaatgacccatcaaaatttaagtttatc tttcttctttccgatgaaataagaatggttcttttaaaaatgttatattt caagaaaattagttttaaagagagaaacttttttgtgacgCACCCGGTAG AAACACAAGGttctattttacaaattttttcaaacgttCCAGGAATGAAA ATTAAGGTATAATGATAATTTAATACTAACCATAGTGTCTNGCAGACCCC CCTCACAAAAATGTCTTcaaatacattcaacttttgaatgaaattcATGT GGTTGCTTCCTATAAAAGTTGTCACGGATCCTATGTGATTGAATCCTATA TGTGAtatatgatatttttttgaattactTACAAGCTANattttttttaa atctctaaCCCACCCTGTAAAAAAGAGACACTATCCTAACCACTGATGAT CCACGGTATTATTTAAAAGCTTTGATTGCTTTGTGCTCTCTTCGCTTGAA ATGTTTGACAGATTAAAGATTGACCATCCATGAGAGAGTTCCTGGGCGTT CGTATTTGcgatgttagcttttttaggctcgtgcaaataaatggatagaa atagaaataggaAGGTGTTTTCTTACATTATTGCAGGTATCAAATAAATG CATTTTATTAGGGGAAAAACCACATTTATTTCATTCGAAAGTTGAATAta tttgaagacattttcgCGAGGGGGTCCACTGGTCCAAAATCTTTTATAGG CCAAAGACTGATGTTacttttttacccattttttgcctttaCAGTTTTGC CTGTAACGTCAGTCTTTaaccaataaaaaattttgctagGCCTTAGCAGC AGACCCCCCTCACAAAAATGTCTTcaaatacattcaacttttgaatgaaa ttcATGTGGTTGCTTCCTATAAAAGTTGTCACGGATCCTATATGTGATTG AATCCTATATGTGAtatatgatatttttttgaattacttacaagctaaaa aaATTACTAATCAATATCAAGATCCAAAACCATACATTAATATGCATTGT GAAAAGTTAGTCCAAActatttattaaaatttgagTTCAAAAGATACTAA GTAAAAATGTTTACTTTCTTGCAGAACACAACAATGGAGATGAACACAGA ATTAGTCTGTGTGATGGCCAGTCTTGGCTATCATGATGACACGGACTACT TTCTGGGTGAAGATTGTCTTCCAAGTCTTAAAGATTTGATTCGTTTCTTG AAACATGAAGATGAATCTTGTAACATCAGAAGACAAATGGGACATTCTCA ACTGATTCAAAAGGTATGACAATCTTTCAATTATTATCCATAACAacggt tttattttgaaagctctaATAACCTCTAATCACTAATGTTTTTCATATGC TAATAAATCTTCTGAATTGTTTAGGACCTTCTTCCAATGTTCATGTTTCA TGCTGAAAATGCAGAACTCATTGATATTGTTGTCAGGTATgttaatttta tcattttttactaCTACATTGGCGAAAGAATATGAATTAGATAAAAACAA GACAGCGCAATGCAAAATTTCATTCCTGCAAAACAAGGTTGAAAGAGGCC ATCAAAGATATCAATAAGATTTACAGCTCACAATAGTTGAGATGTCAATG ATTCTACTTACCTTTCAGTCTCCTATAGGTCCATTAACTTGGTGGTGAAT CTAAGTACAGAATTTCAAGTCCTTTCTGTCATCCTTTCAGATTGCTTGTC AATTTGACCTCACCTGCAGATATTTGCTTCAATAAGAATCAGAGTGAGCT AGCTGAAGAATCTGCCCCCACAAAAATGTCAAACACTTATTCTGCAAAGC AAATGGAAGTTGTTGGCCATCTTCAAGGATACAAAGAGGTAAATTTCTAT TCTGATCTTTCCGGTTGTACCAAAATAGAAATCCTAAAAGTTTAATCATT ATAACAAACTTTAACTTTTCATCTTTAATTTATAGGCTTTTGTAAATGAA AAGGCAATGAGTGCAATTGCTGCTCAAATAGGAAAAGTTTTACAGATggt atgttattattattatgtatTATTTATCATATTGATACTTTGACCTCTAA CTTAATATTCAGTTATTCAGGTCTCTGATCTATCTAAGTAGTTTGCTTTG AGAAAATATCCTTGAGTACACATAATTTGACTTTGTCTAGGAAATGGAAG ATCGAGGAGAAGACGAATATTTGTTATTTGAACGATTGCTTCTCCTGCTG AGAAACATTTTACACGTTCCTGCTTCACCAGAAGATGAAAAGGTgcattt taaaatcattttaccATACTACTTATGCTCAATTAATTTTATGTTTTAGA AAAACAGTAGCAGTTCTTTACCcacatattttcttaaaaactaAATCAAA ATGATTAAACCTAAGGATAGCCAAGGAACTAATTGTTTTAccctcttttt tttgttttagcgAACTGATGATGATGCCTCTCTGCATGATCAAATTTTAT GGTAGGACATTCTTGCATTCTCTTTTAAGTCCTACTACTCAGCTAgccta taaatatttttaaatatttctgtaacctgtattttgaaattttctacttt ttaggATTTTCTTGTAATCTCTTAAGTAGTTCTATTCATTCAGTCTATAA ATTTGCTAGATACTAAGATGTATTTCTATTCAAGTATTTCTGTAACCTGT TACTTGTAATTCTTTACTTCTTAACATTTAGGAGCATGCACTTGAATGGT ATTGATGATTTGTTAGTTTACATTTGTAGCTCGCCAGAAGAGGTAAATTT ATGTGAACATTTAGGTTTTATCATTCCCTCTTTCTGTCAGAAAAGGattc atttttttacaattttgttttAACCATTGAAAATTTTACCTTTCTTTCTG TCTATCTTTTCATATTAGAGTCGCTGGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000449TCONS_00000449Clytia hemisphaericatranscript
TCONS_00000450TCONS_00000450Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000449-proteinTCONS_00000449-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002supercontigsc0000002:953745..962472 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.85 9.82 21.66 19.85 3.85 3.42 6.79 8.25 5.96 9.41 9.14 5.49 5.32 5.24 6.77 9.57 5.69 7.35 2.81 3.34 4.21 5.15 2.47 3.8 11.96 12.86 2.55 1.49 1.33 1.15