XLOC_000282 (gene) - C. hemisphaerica

Overview
NameXLOC_000282
Unique NameXLOC_000282
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000002:725982..732637+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000282 ID=XLOC_000282|Name=XLOC_000282|organism=Clytia hemisphaerica|type=gene|length=6656bp|location=Sequence derived from alignment at sc0000002:725982..732637+ (Clytia hemisphaerica)
AGATAGTGGGTGAGCTATAAttctgatttttgaattttcattttagtaTT TCTgtcaaaaaattatcatttaaaaagtaaaagaaaaaacattatcaaaa gaTGAGAGGAGTGATGAGAATCTTGCTCAATTTTTTGAGCTGTCGTTGGA AGTTGTCTTCAAAATCAATTATCATTGGTATGATTATTTTCTTTGGTGGA AATTATATTATTCTACGTTCGATGTTTGCCCGGAATTATACTGATGAAAC AAAGGTTGGTCACAGAACTGAAGATGATGGTGTTATTGTTAAGCAGAATG TCTATCATAATAATAGaaaagacaataaaaatgaatttattgaATCTTTA GTTGATAAAAGTCAAAATGTTGGGAATGGGAAAAGTCCACATAAATTTAA CCATGAAACTGAGGCACCTgttggaaatcaaaatcatattgATGTTAAGA ATGTTgatcatgaaaataaaaaagatggtAAATTTAAAATTGCTTTATTA ATTATTTCTTGTAATCGAGTTGAAGTACGGCGTTGTTTGGATAAGATTTT TGAACACAAACCTAAAGATTATCCCATTGAAATAATTGTCAGTCAAGATT GTGGTCACAAGGCAACAGCCGATGTTATCCGATCGTATGGTAATCGAATC AAGTTTATTCAACAGCCTGATTTAGGCCCAGTTCATGGAGTACCTAACAA CATGCATCGTTTTATGGGTTATTATAAGATTTCTCGACATTTTCAGTTTG CACTTGGTAAAGTTTTTGAAATGACGGATAGTGATAGTGTAATTATTGTG GAAGATGATATAGAAATAggtatattttttttactttttacatatCTTTT CGAAATCTTTCTAGTTGAGAATTATTAATGCTACATAAAGAgactagttt gagtaaagaaaacgatttaatACAATTCACTGAAGATTTCCATCCtggat ggcatgaaactttgagtatgaaattaacttaaatagttttctttactcaa actagtatAAAGCTCTGTTATCATTAACATTGAGCACTGCTATTGGTTTT GGCTTACACAAAGTAGTGCTTCACAAGAGATGTATTTTCATGGGTTTTTG TTACAATTTGAGAGAATTTACTCTTTCCTGTTGGGTtgggtggaggatat ataatttttgaagtGATCTACCagtaaatattttgatttttcatcgCCTG GACACGTGCCTTACCTTTGGACAAGCATCGACCTCTGAGACACTAAAATG AAATCCATGGAGCATTAATTCATCTAATCGATAAGGCAATTTGATAAATT TGTNCCCTAGTCTTCATAGATATACCATAAGAGGTATAAGGAGGGTCAGA ATCCACTTATTGATCTGCTGAGCATAgtgaggaaaatttttttcaatctg tgattccgacttcctattattcctatctttaaagaagggtgttggaatta gatgAGCGATGTCACCATGACACCAAGTTATGATACTACATTTCAAGCTA GCTGGTATGGTAGGACATAAACGgtggttttgaaaaataatcttCAAATT TACATCCAGGAAGGGAACGTTTTTTAgcagaaatatttttccaaattcaa gagaatttattcagcttttttttgtaaaagaaattcgaaaatgagttttt gaaacTTCTTGTACGACACAGCAAAGTACCAGGGGTACTAATATCCATAG CGCTAGGCACCACAGATATCTAtatacttgaaattttttgcattttctta gTTTAGCCTCTATTAATTAGAACAACCTATACTAGTAGGTATATAGTATA TAGTTTTACAATCTACACTTGCACAACTATAACAGCTACAGAAAACACTC TGACTCCAAATTTCTTGTTTGGCCCAAAGACGTTGAAAACGGTCCAGTGT TTTTTGTGGATCGCCTCGTACATCAAATAAAGGGAGACAAgaaagtaaag ttttttttaaaggatAGAATCATTAATCTTTTATGTGCGGCTCCACCATG TGGAAGGACACGCTTTTGAGTACTAATGCATTATGTATCTGACATGAGAA AAGTGTCTAGTGGGAGTGTGTATGACGTATCCATTCCAAATGAAATTgtc taataaaatattttttttcagtcttGATTACTCTCAGGTATCTAATAGCC CGGGGGAGGGTTGGAATAAgtgataatattttcaaaaattaattagcggg ggggggggggggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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ttcatcgcCTGGACACGTGCCTTACCTTTGGACAAGCATCGACCTCTGAG ACACTAAAATGAAATCCATGGAGCATTAATTCATCTAATCGATAAGGcaa tttgataaatttgttcTATGCTATATCTTCCATCACCTAATGACGATcca ttttggtttttaaaatgTGGATTTTGAAGATGTGTAACTGTTTGTCCAAA ATAAATTGTTCATATTTATATAAAAtccatcatttttttcttcttatagC TCCTGatttctttgattattttttggcAACTCGGAAACTTTTAGAAGTTG ACAACACTTTGTTTTGTGTATCTGCTTGGAATGATAATGGGAAAGAAGAC TCCGTTGATCCATCTGCTATTGATGTTTTGTACAGGTCTGACTTCTTTCC TGGACTTGGCTGGATGATGACTCGTAAACTTTGGAATGAGATTGGGCCTA ACTGGCCTAAAGGTTTTTGGGATGATTGGATGAGAGATCCTAAACAACGT AAAGATAGATCATGTATAAGACCAGAGATATCACGTACAAAAACCTTTGG ACGTATTGGAGTCAGTCAAGGGCAGTTTTATGATCAATATTTAAAGTTTA TCAGACTGAATAATCAAGCTTTTCCATTTCGTGATTACGATTTGAGTTAT TTGACGAAATCAAAATATGATGAAGAATTTTTAGAGAAGGTTTATACAAC ACCTGAAGTGGATTCACAACAAGCTACATCAAAAGGAGCATCAGATGTCC GTATTACTTACAACAATCACTATGAATTCGAAAACTTTGCAAGGCGTTTT GGATTAATGTCAGATTTCAAAGCTGGAGTACCTAGAACAGCATATCATGG TGTAGTCACTTTCTTTCGTGGCGGACATCGCATCTATATAGCTCCGCCCA AAAATTGGAAAGGCTACAGAGAGCATTAATATTACTTCTATTTTAATCTA GAATTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000441TCONS_00000441Clytia hemisphaericatranscript
TCONS_00000442TCONS_00000442Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000441-proteinTCONS_00000441-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002supercontigsc0000002:725982..732637 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
MGAT1PREDICTED: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.69 5.99 2.53 3.18 17.99 11.74 11.9 11.25 11.2 12.47 14.4 8.95 9.4 9.04 10.54 10.01 11.65 13.5 8.26 11.21 9.8 9.88 16.32 18.53 13.88 10.84 11.96 8.95 24.23 19.43