XLOC_000275 (gene) - C. hemisphaerica

Overview
NameXLOC_000275
Unique NameXLOC_000275
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000002:247216..253455+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000275 ID=XLOC_000275|Name=XLOC_000275|organism=Clytia hemisphaerica|type=gene|length=6240bp|location=Sequence derived from alignment at sc0000002:247216..253455+ (Clytia hemisphaerica)
AATCCATGTGTTTTCGGAGAATGTCATAATGTGGATGATCATTCTTTTCG ATGCGACTGTTTTGGCTCCTTTCAAGGCAACAATTGTGAAAGTAAGAGAT CAAATATACATAATTTACGTAATACTGTAATCTGATCAATTTTCATGAGA TTTATATCGCGTGTTTTTATGCgtatttttttgcctttttagcGAAATCG ATCTCGCGAATCAACGTAAAATCGCGAAATGAAGCCGAcgtgaaactttt aaaaattagattttctatACTAATGATTACTCAACTGATTTTTTACTCTA cgatattttataaaatactcGAACTTGTCTTGAGTAGTTAGTTATAGAGG TATATTTTCTCATGCACCATTGGTTCACAATGTTATCTATCTGAGCTTCA TATCAGCtacaatgaatatttttttaaattacagcTTTAGATCCATGCCA TAGTAAACCATGTCAAAATGGAGGGCTTTGCGAGGTAGTTGATGGAAAAG CACATTGTACATGCAATGGAAATTGGCTGCAGCCTATTTGTAAAGGTATT gacatttgacatttttttttaccttttaccTTATATTGTTTCCTTCGTCG CAATTCTCTGAATGTTTTGGATTCTCATTCATTTTCAACTTtcgaataaa aatttgaattttttgcgtTTGGAATTCTCTTATTTCTGATTTCCTTTAAT CCACTCCAAAACAAACTtcttaaaatttgttttgtNTATTTCTGATTTCC TTTAATCCACACCAAAACAAACTtcttaaaatttgttttgtctGGAATGA TTATGTAAGATTATCTCAAGAGTAAAACGTATCCGCTCGAGACTGTTAAA CTGTTAGGAGATCATTAATATCCCTGAAAACACCCCCTGTGTCAttgacc cgctgggaccccagccccacttgaaaatttggcaaagatttCGTCCCCAG TGGGGAAACACCCGAACACcctttcagccccactgggacaTTTAcgttga tttcatccccattcgaaattcaatgtttaaaaattgcactccaaaaccac ccccattggattttttaaccttggaacaatagaatctctatccccattgg gatttcattaggaatttttatccccatcgaGGTAAAAAGTTCCACCGAGG CTGTGAGACTGGGGCGAGGCttaaattcaagggtattttcccaccggaga cgaaatttttgtttctaattttccagtgggggtctgtgacacaggggtgt gtaatcaaatggaattttttcttcttctcagAATGTAATTGTCCAAAGAG TTCTGAACCAGGACATGTTCCTGATTCATATTGTAATGGAGATGGGAAAT GTGTTTGTCATCAAATTCATAATACTCAAAATAATATCTGGATTTTTGAT GAATCATCAAGAGCATGTCGTGAAGGCAAATTTTTATATCTGTATTACCT GAAACTCAatattgttttttgattttttagtcTCCTcaggtgaaacaagg catgtcccaaatatattttgcgtgacgcgcaccgcttcccattattcatt aattttcatatatagctcaaaagaatcgtatcaacgagaggatttcgaaa agtgctgggtcaaaaatttacatcaagccaatctcaagatatcggccaaa aactaattttgacgttataaaatacatcgaaaaaacacgtcaaaaagaca atttaaatgacgtcattattgaaaaaaggcgataattccgattaacttac tacgatcaaagcaaaattttgactggagatgtaaattaaagattttaaaa tattccatgaaaaaaaatttgaaaattcatgacgacgtcagcattttttg acgtattttaatttttcccgacaacaaatgacgtcattcaaattttttga aaatttttgaacaaatatttcagaatcattaatttacaactccagtcaaa attttgtgttgattgcattaataaaattgaagttatcggtgtttttcaat aatgacgtcatttgaatcttacttatgacgtgttttttcgatgtatttta taacgtcaaaatcaatttttgcccgatatcttgagattggcttaatgcaa atttttgacccagcacttttcgaaatccgctcgttgatatgattcttttg agctatatatgaacgttaaggaataattggaagcggtgcgcgtcacgcaa aatatatttgggacatgccttgtttttTACCCGAGTCTTCTCCTTATCGT TCAATACCCTTACATCGGCCATACTTTAATAccaattaaatttgaaattt gtactttcCTGATAATTatctttcacaatttttttgctggaattcaattg AATGACCTCTAAAATTCgtgaaaatagcaaaaatagacatcaaaagAACT GGCAGAAGCATTACCTTCTGGCTATCAAGTTTTTACTCACGCAATTGACA TTGTCACTGAGAATGATAATTAACTTATATTTCTTATTGATAACAGTTCC ACCACAACCCCCTCCGACGGTACATCTCGATCCTTCGCCTCCAATACCAA CCATGCAGACTACAACAGGTAGATAGATACTTGGTTGGAATTATTCATAC TATATTTTAGAGGTAGAAATAATCGGTAAAAACATTTATCActtactctt tttttataagcatacgtgAAAATTGGGTCGAGGCTCAAAATacttagcaa aatctcattttaagccttaaaaaagagtgtacaccgaacaataaaaaatt aactCAAGAACCTATAGAATTTATAGTTGATATGGTTTTTCAATGTGACA AAATCTTGAAAGATCCAAAAGGACAAAGCAACAATTAAACGTTCGAGTCG TAGTATTGTAGAGTTAACTTGTTCCCAGCGTATcagactgaaactcaatg gggattgatattcctatgttttttatggctggtgatttgaattccattgt tttctagccaaaCACCAAAAATAGCACAATACTTTGCAGTGGGATTTGct tctttgattattttcagcaggGACAAAAATGAGAGTATAATCTTctactg gggacgatattttggccaatttttccagtgggaagggttttcattgggtc tgtgagaagggggtatgGTAGAGGTATACACAAGACAAAGGTGTTTGTTT ACTTCACAAAATTATCGTGTCTAACAGAAGTATTTAGATATTTCTTTTTG GTtggattttacggattttcaaaatttacctAAAGTTTTGCTTAAGATTT AAGCATCCTTATAGGCATTTTTCAGCCTTCTCAAGTCTTTGCAACCTAAA CATCTTCGGgcctgtttttaaatttttgtataCTTAAATTGAACAAACAT GTAATTCAAGGAGAATTATATTTCTGCGATTTTTTAAACCTTGAAATATA CAGGGCAATATAGTATAGAGTCTCTATAAGAGTTGTTGCAATATTTCAAA CAAGAATATTCTAAAGGAAAATACAATTTCCATTACAGAATGCCCCAATC CTTGTCATCCGAATCCATGTGAGAATGATGGTGAATGTGTGAAGTTGAGA ACCTCTTCTTCTTGTGGTGCATATGATTGTCAATGTCGACCACAATATAC AGGACCACATTGTCAAGGTACTTCCAAGTTATTTAACTTCTTAAGTTCct ttgctaaattttccaaaGATCTATCTCtatatagatatacttcctataga GATAtctataagaaaattttttcgctagggatgagcagaagcctagttAA AAAGCTAGATACCACAAGACCCGAAATCCCCATCCCCTGCTTGAAAGAAT TTGCGTGgaaattacagttgacgctctctaaatcGATTTTCAAGTGGAAT TTTCATCGAATGATGATGCGTATCAAATAGTATGGCACGCtgtttatgaa agtttttcgTTGACAGCGACTttaaatattatcgaataatgaagcgtatc gaataagtggataaattttggtggggattaaatttggggAGTTTGGCAAA ATTCGCCGAATTAAATCCtcgtcaaaattttcaaatttggcaattcgcca aattaaatccccgccaaatttaacaaaaagagaattatatgaaaaatcac atctttttagtatatttttgagtaatttttaccaatttcagtgtgacaaa atttccaattcgccaaattaaatccccgtcaaattttacgaaattgatct atcgccaaattaaaccCCTgccaaaaattatattttggccaatcgccaaa ttaaatccacgctaaaatttatccttactctcgggtgcctaataaacata cagaccaaaataaacgGTAGTAAAACGTCTAATAAATTagaaagcgtcaa ctgtaaaGATCAAGCATCTCACCAGGTTAGCGTCTTCATCTTATATTCCC GACAAGTTTACGAGGTAATGATAAATTAAGATACTTACGAATTCTCATAT CNCTTATATTCCCAACAAGTTTGCGAGGTAATGATAAATTAAGATACTTA CGATTTCTCATATCTGACCAAACAGAAAACTTGTCATACAGAAAATACAG CCCAAATCCTGTATCATTATCAACATAGTTTACCACATACAACATTTTAC CTTTTTGGATTGATCAAAGTTCTAGCATATacattttatttattataatg AACACGAAATTCCCCCAGAGGGCGTAAGATAGTACCGTAGGGGaaataaa aaaggaataaaaaacgTTGCACAATTTTCCAATCTAATTAAATTGGTCAT TTGACTGTACAGTATATATGGTGCCTAAAAAGTACGGTTgccattcaaaa aaaatattttgacctgCAGTTTCGCCAataatttaataataattttttta gggTCATTGGTCGGCGGAccactttgatctttttcatctaGATTTGGGTG GGATCAATAGCGGTTACTACTTAAAGGACCTTTTCGCATATAATATTTGT CTGCTTTTTCACCTCAGTGGATCGCTGTTTTCACTGCCACATTCATGCGT ATTGCGACCACAATGGCACGTGCAAGTGTGTTCCAGGCTTTACTGGAAAT GGTTATAAATGCGAAAAGGAAAGTGAGTTAATTTTTTCGAGGCTGCAATC ATGGTCAGAATATGTTGGTTTTTCTGTGCATTTTACTGAATTTCAAGTCC GGGCCAGAATGACATTTTTCAGGCTTTCTACTTTATCTAACCAGACATTT CGATTTGGTAGGGGGTAtaatggcttccaggctatattctcagctaTCCT CAAATCCTAAGCTCAAGTCTCCttttaaaactctactttccaaccttAAG TTATAagacagtggggatgaaaataacggactgaaactcgatggggattg atattcccctgtttttttttatggctggggatatcaattcttttgttttc aaggatGGGAAGAAAAGCATTATAtcttgcagtgaggattggcttATTTG ATTATTCTTAGTGGAGACAAAatttggaggataattttccaccggggacg ataatttggacaatttttccagtgggtggGGTTCCACGAGGGGTTCCcag tgagtctgtgagaaggggtgtatagTTGGATAGAAAATAAGACATACAAT ACAATTGCatatttactttttaaaattactTTCATTTCCTAGATAAATGT GGTCCGTGTCCAACATATTCGACTTGTATTGGCGGAAGATGTGATTGTTT ACCTGGGTACGAGCTTCAGCTTGATCAATGTGTTGTCGTAcagaaatgaa agaaaagttcaaaaaacgaaaaacctgtttttaattTCTGCGAAAAAAAG ATGCCTCGAAAATATCTTGTGGTTCGTCGCAGATGTTTCCTGGCNGAAcc tgtttttaattttcacgaaaaaaagATTCCTCGAAAATATCTTGTGGTTC GTCGCAGATGTTTTATCCTAAAAACGGATCTAGAAAGTAGATTGGGCTCT GCCAGAAAACAAACATTCACAGGGCGTGGAAGATATATAGGGTGTCCTGA AAAAATATTGTGTGATTATGTATCacaaaaattttgttcttttcaCTTTG ATTGATGGGATGTAATTTTGCGTGTGAGAAAAGAACAATTTATTAAGTAA TGGTGATAATTTTCACGGATGAAGCCTTTTTAAATTTCCTTCTGGACACT TACacattcttttataagcaaccccaATTTTCGGATCAGAGGGCTGGAGC TGCTAAGGATTTTCCGGAATTCAGCGAAAAGTTTCTTATG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000424TCONS_00000424Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000424-proteinTCONS_00000424-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002supercontigsc0000002:247216..253455 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.17 0.1 0.15 0.23 0.05 0.07 0.13 0.21 0.14 0.07 0.1 0.16 0.02 0 0.08 0.04 2.07 1.78 0 0 1.09 1.01 0.27 0.39 0.66 0.26 0 0 0.04 0.04