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TCONS_00000424 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000424
Unique NameTCONS_00000424
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1250

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000424 ID=TCONS_00000424|Name=TCONS_00000424|organism=Clytia hemisphaerica|type=transcript|length=1250bp
AATCCATGTGTTTTCGGAGAATGTCATAATGTGGATGATCATTCTTTTCG
ATGCGACTGTTTTGGCTCCTTTCAAGGCAACAATTGTGAAAcTTTAGATC
CATGCCATAGTAAACCATGTCAAAATGGAGGGCTTTGCGAGGTAGTTGAT
GGAAAAGCACATTGTACATGCAATGGAAATTGGCTGCAGCCTATTTGTAA
AGAATGTAATTGTCCAAAGAGTTCTGAACCAGGACATGTTCCTGATTCAT
ATTGTAATGGAGATGGGAAATGTGTTTGTCATCAAATTCATAATACTCAA
AATAATATCTGGATTTTTGATGAATCATCAAGAGCATGTCGTGAAGTTCC
ACCACAACCCCCTCCGACGGTACATCTCGATCCTTCGCCTCCAATACCAA
CCATGCAGACTACAACAGAATGCCCCAATCCTTGTCATCCGAATCCATGT
GAGAATGATGGTGAATGTGTGAAGTTGAGAACCTCTTCTTCTTGTGGTGC
ATATGATTGTCAATGTCGACCACAATATACAGGACCACATTGTCAAGTGG
ATCGCTGTTTTCACTGCCACATTCATGCGTATTGCGACCACAATGGCACG
TGCAAGTGTGTTCCAGGCTTTACTGGAAATGGTTATAAATGCGAAAAGGA
AAATAAATGTGGTCCGTGTCCAACATATTCGACTTGTATTGGCGGAAGAT
GTGATTGTTTACCTGGGTACGAGCTTCAGCTTGATCAATGTGTTGTCGTA
cagaaatgaaagaaaagttcaaaaaacgaaaaacctgtttttaattTCTG
CGAAAAAAAGATGCCTCGAAAATATCTTGTGGTTCGTCGCAGATGTTTCC
TGGCNGAAcctgtttttaattttcacgaaaaaaagATTCCTCGAAAATAT
CTTGTGGTTCGTCGCAGATGTTTTATCCTAAAAACGGATCTAGAAAGTAG
ATTGGGCTCTGCCAGAAAACAAACATTCACAGGGCGTGGAAGATATATAG
GGTGTCCTGAAAAAATATTGTGTGATTATGTATCacaaaaattttgttct
tttcaCTTTGATTGATGGGATGTAATTTTGCGTGTGAGAAAAGAACAATT
TATTAAGTAATGGTGATAATTTTCACGGATGAAGCCTTTTTAAATTTCCT
TCTGGACACTTACacattcttttataagcaaccccaATTTTCGGATCAGA
GGGCTGGAGCTGCTAAGGATTTTCCGGAATTCAGCGAAAAGTTTCTTATG
Run BLAST on NCBI

protein sequence of TCONS_00000424-protein

>TCONS_00000424-protein ID=TCONS_00000424-protein|Name=TCONS_00000424-protein|organism=Clytia hemisphaerica|type=polypeptide|length=252bp
NPCVFGECHNVDDHSFRCDCFGSFQGNNCETLDPCHSKPCQNGGLCEVVD
GKAHCTCNGNWLQPICKECNCPKSSEPGHVPDSYCNGDGKCVCHQIHNTQ
NNIWIFDESSRACREVPPQPPPTVHLDPSPPIPTMQTTTECPNPCHPNPC
ENDGECVKLRTSSSCGAYDCQCRPQYTGPHCQVDRCFHCHIHAYCDHNGT
CKCVPGFTGNGYKCEKENKCGPCPTYSTCIGGRCDCLPGYELQLDQCVVV
QK
Run BLAST on NCBI

transcript from alignment at sc0000002:247216..253455+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000424 ID=TCONS_00000424|Name=TCONS_00000424|organism=Clytia hemisphaerica|type=transcript|length=6240bp|location=Sequence derived from alignment at sc0000002:247216..253455+ (Clytia hemisphaerica)
AATCCATGTGTTTTCGGAGAATGTCATAATGTGGATGATCATTCTTTTCG ATGCGACTGTTTTGGCTCCTTTCAAGGCAACAATTGTGAAAGTAAGAGAT CAAATATACATAATTTACGTAATACTGTAATCTGATCAATTTTCATGAGA TTTATATCGCGTGTTTTTATGCgtatttttttgcctttttagcGAAATCG ATCTCGCGAATCAACGTAAAATCGCGAAATGAAGCCGAcgtgaaactttt aaaaattagattttctatACTAATGATTACTCAACTGATTTTTTACTCTA cgatattttataaaatactcGAACTTGTCTTGAGTAGTTAGTTATAGAGG TATATTTTCTCATGCACCATTGGTTCACAATGTTATCTATCTGAGCTTCA TATCAGCtacaatgaatatttttttaaattacagcTTTAGATCCATGCCA TAGTAAACCATGTCAAAATGGAGGGCTTTGCGAGGTAGTTGATGGAAAAG CACATTGTACATGCAATGGAAATTGGCTGCAGCCTATTTGTAAAGGTATT gacatttgacatttttttttaccttttaccTTATATTGTTTCCTTCGTCG CAATTCTCTGAATGTTTTGGATTCTCATTCATTTTCAACTTtcgaataaa aatttgaattttttgcgtTTGGAATTCTCTTATTTCTGATTTCCTTTAAT CCACTCCAAAACAAACTtcttaaaatttgttttgtNTATTTCTGATTTCC TTTAATCCACACCAAAACAAACTtcttaaaatttgttttgtctGGAATGA TTATGTAAGATTATCTCAAGAGTAAAACGTATCCGCTCGAGACTGTTAAA CTGTTAGGAGATCATTAATATCCCTGAAAACACCCCCTGTGTCAttgacc cgctgggaccccagccccacttgaaaatttggcaaagatttCGTCCCCAG TGGGGAAACACCCGAACACcctttcagccccactgggacaTTTAcgttga tttcatccccattcgaaattcaatgtttaaaaattgcactccaaaaccac ccccattggattttttaaccttggaacaatagaatctctatccccattgg gatttcattaggaatttttatccccatcgaGGTAAAAAGTTCCACCGAGG CTGTGAGACTGGGGCGAGGCttaaattcaagggtattttcccaccggaga cgaaatttttgtttctaattttccagtgggggtctgtgacacaggggtgt gtaatcaaatggaattttttcttcttctcagAATGTAATTGTCCAAAGAG TTCTGAACCAGGACATGTTCCTGATTCATATTGTAATGGAGATGGGAAAT GTGTTTGTCATCAAATTCATAATACTCAAAATAATATCTGGATTTTTGAT GAATCATCAAGAGCATGTCGTGAAGGCAAATTTTTATATCTGTATTACCT GAAACTCAatattgttttttgattttttagtcTCCTcaggtgaaacaagg catgtcccaaatatattttgcgtgacgcgcaccgcttcccattattcatt aattttcatatatagctcaaaagaatcgtatcaacgagaggatttcgaaa agtgctgggtcaaaaatttacatcaagccaatctcaagatatcggccaaa aactaattttgacgttataaaatacatcgaaaaaacacgtcaaaaagaca atttaaatgacgtcattattgaaaaaaggcgataattccgattaacttac tacgatcaaagcaaaattttgactggagatgtaaattaaagattttaaaa tattccatgaaaaaaaatttgaaaattcatgacgacgtcagcattttttg acgtattttaatttttcccgacaacaaatgacgtcattcaaattttttga aaatttttgaacaaatatttcagaatcattaatttacaactccagtcaaa attttgtgttgattgcattaataaaattgaagttatcggtgtttttcaat aatgacgtcatttgaatcttacttatgacgtgttttttcgatgtatttta taacgtcaaaatcaatttttgcccgatatcttgagattggcttaatgcaa atttttgacccagcacttttcgaaatccgctcgttgatatgattcttttg agctatatatgaacgttaaggaataattggaagcggtgcgcgtcacgcaa aatatatttgggacatgccttgtttttTACCCGAGTCTTCTCCTTATCGT TCAATACCCTTACATCGGCCATACTTTAATAccaattaaatttgaaattt gtactttcCTGATAATTatctttcacaatttttttgctggaattcaattg AATGACCTCTAAAATTCgtgaaaatagcaaaaatagacatcaaaagAACT GGCAGAAGCATTACCTTCTGGCTATCAAGTTTTTACTCACGCAATTGACA TTGTCACTGAGAATGATAATTAACTTATATTTCTTATTGATAACAGTTCC ACCACAACCCCCTCCGACGGTACATCTCGATCCTTCGCCTCCAATACCAA CCATGCAGACTACAACAGGTAGATAGATACTTGGTTGGAATTATTCATAC TATATTTTAGAGGTAGAAATAATCGGTAAAAACATTTATCActtactctt tttttataagcatacgtgAAAATTGGGTCGAGGCTCAAAATacttagcaa aatctcattttaagccttaaaaaagagtgtacaccgaacaataaaaaatt aactCAAGAACCTATAGAATTTATAGTTGATATGGTTTTTCAATGTGACA AAATCTTGAAAGATCCAAAAGGACAAAGCAACAATTAAACGTTCGAGTCG TAGTATTGTAGAGTTAACTTGTTCCCAGCGTATcagactgaaactcaatg gggattgatattcctatgttttttatggctggtgatttgaattccattgt tttctagccaaaCACCAAAAATAGCACAATACTTTGCAGTGGGATTTGct tctttgattattttcagcaggGACAAAAATGAGAGTATAATCTTctactg gggacgatattttggccaatttttccagtgggaagggttttcattgggtc tgtgagaagggggtatgGTAGAGGTATACACAAGACAAAGGTGTTTGTTT ACTTCACAAAATTATCGTGTCTAACAGAAGTATTTAGATATTTCTTTTTG GTtggattttacggattttcaaaatttacctAAAGTTTTGCTTAAGATTT AAGCATCCTTATAGGCATTTTTCAGCCTTCTCAAGTCTTTGCAACCTAAA CATCTTCGGgcctgtttttaaatttttgtataCTTAAATTGAACAAACAT GTAATTCAAGGAGAATTATATTTCTGCGATTTTTTAAACCTTGAAATATA CAGGGCAATATAGTATAGAGTCTCTATAAGAGTTGTTGCAATATTTCAAA CAAGAATATTCTAAAGGAAAATACAATTTCCATTACAGAATGCCCCAATC CTTGTCATCCGAATCCATGTGAGAATGATGGTGAATGTGTGAAGTTGAGA ACCTCTTCTTCTTGTGGTGCATATGATTGTCAATGTCGACCACAATATAC AGGACCACATTGTCAAGGTACTTCCAAGTTATTTAACTTCTTAAGTTCct ttgctaaattttccaaaGATCTATCTCtatatagatatacttcctataga GATAtctataagaaaattttttcgctagggatgagcagaagcctagttAA AAAGCTAGATACCACAAGACCCGAAATCCCCATCCCCTGCTTGAAAGAAT TTGCGTGgaaattacagttgacgctctctaaatcGATTTTCAAGTGGAAT TTTCATCGAATGATGATGCGTATCAAATAGTATGGCACGCtgtttatgaa agtttttcgTTGACAGCGACTttaaatattatcgaataatgaagcgtatc gaataagtggataaattttggtggggattaaatttggggAGTTTGGCAAA ATTCGCCGAATTAAATCCtcgtcaaaattttcaaatttggcaattcgcca aattaaatccccgccaaatttaacaaaaagagaattatatgaaaaatcac atctttttagtatatttttgagtaatttttaccaatttcagtgtgacaaa atttccaattcgccaaattaaatccccgtcaaattttacgaaattgatct atcgccaaattaaaccCCTgccaaaaattatattttggccaatcgccaaa ttaaatccacgctaaaatttatccttactctcgggtgcctaataaacata cagaccaaaataaacgGTAGTAAAACGTCTAATAAATTagaaagcgtcaa ctgtaaaGATCAAGCATCTCACCAGGTTAGCGTCTTCATCTTATATTCCC GACAAGTTTACGAGGTAATGATAAATTAAGATACTTACGAATTCTCATAT CNCTTATATTCCCAACAAGTTTGCGAGGTAATGATAAATTAAGATACTTA CGATTTCTCATATCTGACCAAACAGAAAACTTGTCATACAGAAAATACAG CCCAAATCCTGTATCATTATCAACATAGTTTACCACATACAACATTTTAC CTTTTTGGATTGATCAAAGTTCTAGCATATacattttatttattataatg AACACGAAATTCCCCCAGAGGGCGTAAGATAGTACCGTAGGGGaaataaa aaaggaataaaaaacgTTGCACAATTTTCCAATCTAATTAAATTGGTCAT TTGACTGTACAGTATATATGGTGCCTAAAAAGTACGGTTgccattcaaaa aaaatattttgacctgCAGTTTCGCCAataatttaataataattttttta gggTCATTGGTCGGCGGAccactttgatctttttcatctaGATTTGGGTG GGATCAATAGCGGTTACTACTTAAAGGACCTTTTCGCATATAATATTTGT CTGCTTTTTCACCTCAGTGGATCGCTGTTTTCACTGCCACATTCATGCGT ATTGCGACCACAATGGCACGTGCAAGTGTGTTCCAGGCTTTACTGGAAAT GGTTATAAATGCGAAAAGGAAAGTGAGTTAATTTTTTCGAGGCTGCAATC ATGGTCAGAATATGTTGGTTTTTCTGTGCATTTTACTGAATTTCAAGTCC GGGCCAGAATGACATTTTTCAGGCTTTCTACTTTATCTAACCAGACATTT CGATTTGGTAGGGGGTAtaatggcttccaggctatattctcagctaTCCT CAAATCCTAAGCTCAAGTCTCCttttaaaactctactttccaaccttAAG TTATAagacagtggggatgaaaataacggactgaaactcgatggggattg atattcccctgtttttttttatggctggggatatcaattcttttgttttc aaggatGGGAAGAAAAGCATTATAtcttgcagtgaggattggcttATTTG ATTATTCTTAGTGGAGACAAAatttggaggataattttccaccggggacg ataatttggacaatttttccagtgggtggGGTTCCACGAGGGGTTCCcag tgagtctgtgagaaggggtgtatagTTGGATAGAAAATAAGACATACAAT ACAATTGCatatttactttttaaaattactTTCATTTCCTAGATAAATGT GGTCCGTGTCCAACATATTCGACTTGTATTGGCGGAAGATGTGATTGTTT ACCTGGGTACGAGCTTCAGCTTGATCAATGTGTTGTCGTAcagaaatgaa agaaaagttcaaaaaacgaaaaacctgtttttaattTCTGCGAAAAAAAG ATGCCTCGAAAATATCTTGTGGTTCGTCGCAGATGTTTCCTGGCNGAAcc tgtttttaattttcacgaaaaaaagATTCCTCGAAAATATCTTGTGGTTC GTCGCAGATGTTTTATCCTAAAAACGGATCTAGAAAGTAGATTGGGCTCT GCCAGAAAACAAACATTCACAGGGCGTGGAAGATATATAGGGTGTCCTGA AAAAATATTGTGTGATTATGTATCacaaaaattttgttcttttcaCTTTG ATTGATGGGATGTAATTTTGCGTGTGAGAAAAGAACAATTTATTAAGTAA TGGTGATAATTTTCACGGATGAAGCCTTTTTAAATTTCCTTCTGGACACT TACacattcttttataagcaaccccaATTTTCGGATCAGAGGGCTGGAGC TGCTAAGGATTTTCCGGAATTCAGCGAAAAGTTTCTTATG

Coding sequence (CDS) from alignment at sc0000002:247216..253455+

>TCONS_00000424 ID=TCONS_00000424|Name=TCONS_00000424|organism=Clytia hemisphaerica|type=CDS|length=5313bp|location=Sequence derived from alignment at sc0000002:247216..253455+ (Clytia hemisphaerica)
AATCCATGTGTTTTCGGAGAATGTCATAATGTGGATGATCATTCTTTTCG
ATGCGACTGTTTTGGCTCCTTTCAAGGCAACAATTGTGAAAcTTTAGATC
CATGCCATAGTAAACCATGTCAAAATGGAGGGCTTTGCGAGGTAGTTGAT
GGAAAAGCACATTGTACATGCAATGGAAATTGGCTGCAGCCTATTTGTAA
AGAATGTAATTGTCCAAAGAGTTCTGAACCAGGACATGTTCCTGATTCAT
ATTGTAATGGAGATGGGAAATGTGTTTGTCATCAAATTCATAATACTCAA
AATAATATCTGGATTTTTGATGAATCATCAAGAGCATGTCGTGAAGTTCC
ACCACAACCCCCTCCGACGGTACATCTCGATCCTTCGCCTCCAATACCAA
CCATGCAGACTACAACAGAATGCCCCAATCCTTGTCATCCGAATCCATGT
GAGAATGATGGTGAATGTGTGAAGTTGAGAACCTCTTCTTCTTGTGGTGC
ATATGATTGTCAATGTCGACCACAATATACAGGACCACATTGTCAAGTGG
ATCGCTGTTTTCACTGCCACATTCATGCGTATTGCGACCACAATGGCACG
TGCAAGTGTGTTCCAGGCTTTACTGGAAATGGTTATAAATGCGAAAAGGA
AAATAAATGTGGTCCGTGTCCAACATATTCGACTTGTATTGGCGGAAGAT
GTGATTGTTTACCTGGGTACGAGCTTCAGCTTGATCAATGTGTTGTCGTA
cagaaatgaAATCCATGTGTTTTCGGAGAATGTCATAATGTGGATGATCA
TTCTTTTCGATGCGACTGTTTTGGCTCCTTTCAAGGCAACAATTGTGAAA
cTTTAGATCCATGCCATAGTAAACCATGTCAAAATGGAGGGCTTTGCGAG
GTAGTTGATGGAAAAGCACATTGTACATGCAATGGAAATTGGCTGCAGCC
TATTTGTAAAGAATGTAATTGTCCAAAGAGTTCTGAACCAGGACATGTTC
CTGATTCATATTGTAATGGAGATGGGAAATGTGTTTGTCATCAAATTCAT
AATACTCAAAATAATATCTGGATTTTTGATGAATCATCAAGAGCATGTCG
TGAAGTTCCACCACAACCCCCTCCGACGGTACATCTCGATCCTTCGCCTC
CAATACCAACCATGCAGACTACAACAGAATGCCCCAATCCTTGTCATCCG
AATCCATGTGAGAATGATGGTGAATGTGTGAAGTTGAGAACCTCTTCTTC
TTGTGGTGCATATGATTGTCAATGTCGACCACAATATACAGGACCACATT
GTCAAGTGGATCGCTGTTTTCACTGCCACATTCATGCGTATTGCGACCAC
AATGGCACGTGCAAGTGTGTTCCAGGCTTTACTGGAAATGGTTATAAATG
CGAAAAGGAAAATAAATGTGGTCCGTGTCCAACATATTCGACTTGTATTG
GCGGAAGATGTGATTGTTTACCTGGGTACGAGCTTCAGCTTGATCAATGT
GTTGTCGTAcagaaatgaAATCCATGTGTTTTCGGAGAATGTCATAATGT
GGATGATCATTCTTTTCGATGCGACTGTTTTGGCTCCTTTCAAGGCAACA
ATTGTGAAAcTTTAGATCCATGCCATAGTAAACCATGTCAAAATGGAGGG
CTTTGCGAGGTAGTTGATGGAAAAGCACATTGTACATGCAATGGAAATTG
GCTGCAGCCTATTTGTAAAGAATGTAATTGTCCAAAGAGTTCTGAACCAG
GACATGTTCCTGATTCATATTGTAATGGAGATGGGAAATGTGTTTGTCAT
CAAATTCATAATACTCAAAATAATATCTGGATTTTTGATGAATCATCAAG
AGCATGTCGTGAAGTTCCACCACAACCCCCTCCGACGGTACATCTCGATC
CTTCGCCTCCAATACCAACCATGCAGACTACAACAGAATGCCCCAATCCT
TGTCATCCGAATCCATGTGAGAATGATGGTGAATGTGTGAAGTTGAGAAC
CTCTTCTTCTTGTGGTGCATATGATTGTCAATGTCGACCACAATATACAG
GACCACATTGTCAAGTGGATCGCTGTTTTCACTGCCACATTCATGCGTAT
TGCGACCACAATGGCACGTGCAAGTGTGTTCCAGGCTTTACTGGAAATGG
TTATAAATGCGAAAAGGAAAATAAATGTGGTCCGTGTCCAACATATTCGA
CTTGTATTGGCGGAAGATGTGATTGTTTACCTGGGTACGAGCTTCAGCTT
GATCAATGTGTTGTCGTAcagaaatgaAATCCATGTGTTTTCGGAGAATG
TCATAATGTGGATGATCATTCTTTTCGATGCGACTGTTTTGGCTCCTTTC
AAGGCAACAATTGTGAAAcTTTAGATCCATGCCATAGTAAACCATGTCAA
AATGGAGGGCTTTGCGAGGTAGTTGATGGAAAAGCACATTGTACATGCAA
TGGAAATTGGCTGCAGCCTATTTGTAAAGAATGTAATTGTCCAAAGAGTT
CTGAACCAGGACATGTTCCTGATTCATATTGTAATGGAGATGGGAAATGT
GTTTGTCATCAAATTCATAATACTCAAAATAATATCTGGATTTTTGATGA
ATCATCAAGAGCATGTCGTGAAGTTCCACCACAACCCCCTCCGACGGTAC
ATCTCGATCCTTCGCCTCCAATACCAACCATGCAGACTACAACAGAATGC
CCCAATCCTTGTCATCCGAATCCATGTGAGAATGATGGTGAATGTGTGAA
GTTGAGAACCTCTTCTTCTTGTGGTGCATATGATTGTCAATGTCGACCAC
AATATACAGGACCACATTGTCAAGTGGATCGCTGTTTTCACTGCCACATT
CATGCGTATTGCGACCACAATGGCACGTGCAAGTGTGTTCCAGGCTTTAC
TGGAAATGGTTATAAATGCGAAAAGGAAAATAAATGTGGTCCGTGTCCAA
CATATTCGACTTGTATTGGCGGAAGATGTGATTGTTTACCTGGGTACGAG
CTTCAGCTTGATCAATGTGTTGTCGTAcagaaatgaAATCCATGTGTTTT
CGGAGAATGTCATAATGTGGATGATCATTCTTTTCGATGCGACTGTTTTG
GCTCCTTTCAAGGCAACAATTGTGAAAcTTTAGATCCATGCCATAGTAAA
CCATGTCAAAATGGAGGGCTTTGCGAGGTAGTTGATGGAAAAGCACATTG
TACATGCAATGGAAATTGGCTGCAGCCTATTTGTAAAGAATGTAATTGTC
CAAAGAGTTCTGAACCAGGACATGTTCCTGATTCATATTGTAATGGAGAT
GGGAAATGTGTTTGTCATCAAATTCATAATACTCAAAATAATATCTGGAT
TTTTGATGAATCATCAAGAGCATGTCGTGAAGTTCCACCACAACCCCCTC
CGACGGTACATCTCGATCCTTCGCCTCCAATACCAACCATGCAGACTACA
ACAGAATGCCCCAATCCTTGTCATCCGAATCCATGTGAGAATGATGGTGA
ATGTGTGAAGTTGAGAACCTCTTCTTCTTGTGGTGCATATGATTGTCAAT
GTCGACCACAATATACAGGACCACATTGTCAAGTGGATCGCTGTTTTCAC
TGCCACATTCATGCGTATTGCGACCACAATGGCACGTGCAAGTGTGTTCC
AGGCTTTACTGGAAATGGTTATAAATGCGAAAAGGAAAATAAATGTGGTC
CGTGTCCAACATATTCGACTTGTATTGGCGGAAGATGTGATTGTTTACCT
GGGTACGAGCTTCAGCTTGATCAATGTGTTGTCGTAcagaaatgaAATCC
ATGTGTTTTCGGAGAATGTCATAATGTGGATGATCATTCTTTTCGATGCG
ACTGTTTTGGCTCCTTTCAAGGCAACAATTGTGAAAcTTTAGATCCATGC
CATAGTAAACCATGTCAAAATGGAGGGCTTTGCGAGGTAGTTGATGGAAA
AGCACATTGTACATGCAATGGAAATTGGCTGCAGCCTATTTGTAAAGAAT
GTAATTGTCCAAAGAGTTCTGAACCAGGACATGTTCCTGATTCATATTGT
AATGGAGATGGGAAATGTGTTTGTCATCAAATTCATAATACTCAAAATAA
TATCTGGATTTTTGATGAATCATCAAGAGCATGTCGTGAAGTTCCACCAC
AACCCCCTCCGACGGTACATCTCGATCCTTCGCCTCCAATACCAACCATG
CAGACTACAACAGAATGCCCCAATCCTTGTCATCCGAATCCATGTGAGAA
TGATGGTGAATGTGTGAAGTTGAGAACCTCTTCTTCTTGTGGTGCATATG
ATTGTCAATGTCGACCACAATATACAGGACCACATTGTCAAGTGGATCGC
TGTTTTCACTGCCACATTCATGCGTATTGCGACCACAATGGCACGTGCAA
GTGTGTTCCAGGCTTTACTGGAAATGGTTATAAATGCGAAAAGGAAAATA
AATGTGGTCCGTGTCCAACATATTCGACTTGTATTGGCGGAAGATGTGAT
TGTTTACCTGGGTACGAGCTTCAGCTTGATCAATGTGTTGTCGTAcagaa
atgaAATCCATGTGTTTTCGGAGAATGTCATAATGTGGATGATCATTCTT
TTCGATGCGACTGTTTTGGCTCCTTTCAAGGCAACAATTGTGAAAcTTTA
GATCCATGCCATAGTAAACCATGTCAAAATGGAGGGCTTTGCGAGGTAGT
TGATGGAAAAGCACATTGTACATGCAATGGAAATTGGCTGCAGCCTATTT
GTAAAGAATGTAATTGTCCAAAGAGTTCTGAACCAGGACATGTTCCTGAT
TCATATTGTAATGGAGATGGGAAATGTGTTTGTCATCAAATTCATAATAC
TCAAAATAATATCTGGATTTTTGATGAATCATCAAGAGCATGTCGTGAAG
TTCCACCACAACCCCCTCCGACGGTACATCTCGATCCTTCGCCTCCAATA
CCAACCATGCAGACTACAACAGAATGCCCCAATCCTTGTCATCCGAATCC
ATGTGAGAATGATGGTGAATGTGTGAAGTTGAGAACCTCTTCTTCTTGTG
GTGCATATGATTGTCAATGTCGACCACAATATACAGGACCACATTGTCAA
GTGGATCGCTGTTTTCACTGCCACATTCATGCGTATTGCGACCACAATGG
CACGTGCAAGTGTGTTCCAGGCTTTACTGGAAATGGTTATAAATGCGAAA
AGGAAAATAAATGTGGTCCGTGTCCAACATATTCGACTTGTATTGGCGGA
AGATGTGATTGTTTACCTGGGTACGAGCTTCAGCTTGATCAATGTGTTGT
CGTAcagaaatga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000275XLOC_000275Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000424-exon-sc0000002-1491911889:247216..247306TCONS_00000424-exon-sc0000002-1491911889:247216..247306Clytia hemisphaericaexon
TCONS_00000424-exon-sc0000002-1510915933:247216..247306TCONS_00000424-exon-sc0000002-1510915933:247216..247306Clytia hemisphaericaexon
TCONS_00000424-exon-sc0000002-1575043694:247216..247306TCONS_00000424-exon-sc0000002-1575043694:247216..247306Clytia hemisphaericaexon
TCONS_00000424-exon-sc0000002-1491911889:247650..247760TCONS_00000424-exon-sc0000002-1491911889:247650..247760Clytia hemisphaericaexon
TCONS_00000424-exon-sc0000002-1510915933:247650..247760TCONS_00000424-exon-sc0000002-1510915933:247650..247760Clytia hemisphaericaexon
TCONS_00000424-exon-sc0000002-1575043694:247650..247760TCONS_00000424-exon-sc0000002-1575043694:247650..247760Clytia hemisphaericaexon
TCONS_00000424-exon-sc0000002-1491911889:248497..248640TCONS_00000424-exon-sc0000002-1491911889:248497..248640Clytia hemisphaericaexon
TCONS_00000424-exon-sc0000002-1510915933:248497..248640TCONS_00000424-exon-sc0000002-1510915933:248497..248640Clytia hemisphaericaexon
TCONS_00000424-exon-sc0000002-1575043694:248497..248640TCONS_00000424-exon-sc0000002-1575043694:248497..248640Clytia hemisphaericaexon
TCONS_00000424-exon-sc0000002-1491911889:249712..249783TCONS_00000424-exon-sc0000002-1491911889:249712..249783Clytia hemisphaericaexon
TCONS_00000424-exon-sc0000002-1510915933:249712..249783TCONS_00000424-exon-sc0000002-1510915933:249712..249783Clytia hemisphaericaexon
TCONS_00000424-exon-sc0000002-1575043694:249712..249783TCONS_00000424-exon-sc0000002-1575043694:249712..249783Clytia hemisphaericaexon
TCONS_00000424-exon-sc0000002-1491911889:250704..250832TCONS_00000424-exon-sc0000002-1491911889:250704..250832Clytia hemisphaericaexon
TCONS_00000424-exon-sc0000002-1510915933:250704..250832TCONS_00000424-exon-sc0000002-1510915933:250704..250832Clytia hemisphaericaexon
TCONS_00000424-exon-sc0000002-1575043694:250704..250832TCONS_00000424-exon-sc0000002-1575043694:250704..250832Clytia hemisphaericaexon
TCONS_00000424-exon-sc0000002-1491911889:252183..252287TCONS_00000424-exon-sc0000002-1491911889:252183..252287Clytia hemisphaericaexon
TCONS_00000424-exon-sc0000002-1510915933:252183..252287TCONS_00000424-exon-sc0000002-1510915933:252183..252287Clytia hemisphaericaexon
TCONS_00000424-exon-sc0000002-1575043694:252183..252287TCONS_00000424-exon-sc0000002-1575043694:252183..252287Clytia hemisphaericaexon
TCONS_00000424-exon-sc0000002-1491911889:252858..253455TCONS_00000424-exon-sc0000002-1491911889:252858..253455Clytia hemisphaericaexon
TCONS_00000424-exon-sc0000002-1510915933:252858..253455TCONS_00000424-exon-sc0000002-1510915933:252858..253455Clytia hemisphaericaexon
TCONS_00000424-exon-sc0000002-1575043694:252858..253455TCONS_00000424-exon-sc0000002-1575043694:252858..253455Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000424-proteinTCONS_00000424-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002supercontigsc0000002:247216..253455 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.170402 0.0997014 0.154351 0.226512 0.0459594 0.0726354 0.131447 0.205099 0.143595 0.0711461 0.103584 0.158882 0.0226658 0 0.077408 0.0415353 2.07231 1.78315 0 0 1.08738 1.01255 0.273532 0.390783 0.658632 0.26125 0 0 0.0378266 0.0385394
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000742EGF-like_dom
IPR013032EGF-like_CS
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000424 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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