XLOC_000268 (gene) - C. hemisphaerica

Overview
NameXLOC_000268
Unique NameXLOC_000268
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000002:36021..40946+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000268 ID=XLOC_000268|Name=XLOC_000268|organism=Clytia hemisphaerica|type=gene|length=4926bp|location=Sequence derived from alignment at sc0000002:36021..40946+ (Clytia hemisphaerica)
AACAATGTAACGCTACTGGTAAGACACCAGTCTATGAAAGCTGGTTACAA GGAACATTACCAAATCTACTCATCATCATACCATATTAAATGGCATCAAA TGAAGACACAGTCAAAGAGGTTGTGCTAACAAACGGAAAACAACTAACTG CAATCAACGAAGACTATACATCGACCATCGACCCTGGCACTCCTATAATT GTCAACAATGATCAATCTAGCTCGTCGCCAGCAAATCCTGGTTCAAAACC AAATGAAGACATCTTGCTCCCGAGTTCACAGAGACGTAATTCAAAACAAA GCGACAGCCCTGTACCCCCGAATTCACAGAGACGTAATTCAAAACAAAGC GACAACCCTGTACCCCCGAATTCATCGAGACGTAACTCAAAACAAAGCGA CCCTGAAGTGCCAAATTCACCGAGACGTAACTCTAAGCAAAGCGAGAGCC CTACGCTGCCAAATTCACAGAGACGTAATTCAGAACAAAGTGAAGACTCA AATTCACAGAAACGTAACTCTAAACAAAGCGAGAGCCCTGTGCTCCCGAA CTCACAGAGGCGTAATTCAAAACAGAGCGACGATCCTGTAAACCCAAAGT CCCGATCACGCAATTCCAAACAAAGCGAAGATTTAAATTCACAGAGACGT AGCTCAAAACAACAAGAAAGTCCTAAAGACTTTGATCTCGAAGAAAACGC ACTTACAATTTTACCCAGAGTAAACAATGTTTTATCTCCAAGTGATACAT CATTTGAAGAAATCGTTTTGTGTGACCCCCCACTGGCAAATAGAAAACCA TCAAAAAGCGCAATTAAAAGATTCAAAGCTAACAACAAGCAGGATGAAAC AACAAAGTCTTCACTTAAAAAGAGTCCACTTTTGGCCGGTAAGGAATTTC TAGACTACCTTAAGGGACCtgatttttgcgggaactaaattttgcggttt ttgcgTATTTAGACCCAAGCCGTAAAATTAAGTTTCcgccaaatttttcg aaatgcgaaaaacaaaggtcgaataattcacagtacggctctaattttct ttcaagtgagaaatccgcaaagttaagttcccgcaaatattaaatattaa atcttgaaccgcgaaccgcaaaaattagttcctgcaaaaaatagtgttca gacgttacggtttcgtacCTCTCCGGTGTGGTATTTGTTACGGATAGgaa gtgttcatattggtttcgaaAAGTTTCGGGGAAACGAAGCAGAGCAGTTC CGTTCCAATaaaaatagtggagcgaaactGTTTCGAAACAGTTTGTAACG ACTTCTTTTTTAACGTTTCGAATtctgacgttcacacttgtttcggaacc gtttcgtttcggataTCGTTacaaaccgtaacgtctgaacgcGGTCTCAG AAACGTTAAAACAGAAGGCGTCAATTTCCTTTTTATCCATGATTACGACT TAAGGTTGTAGAGAAATAAAAGCAATTAGTTTCTACTTGGGAAATAAGCT ATCTTAACTTCACCTCGAATCAAAGTTCCTAACGAACCAACAACACATCC CCTCGTGGTCATCATTCTAATCAAATGcttacaaaattatttttctgaca ATAGAAAAGGTACTCCACCAAAAACTAAAGAGATGCGAGTCAATGCATAC TATTCATATTTTCATTAACAAAAATTGATTCATTTTCAGGGCTTTCAGGC ATAAAACAGAAATTTAGTTCAGTTCGCTTCAGCTCGATTCTAGACATACA TATCCCGTCCGAAACTCATCCCCAGAGCGATGAGCCAAGCTATGCAGTTA GCATTGAGGGAAATGAACCTCCATATGATTTTGATCAACAATATGGACGA TTACCGAGGCCAACAATGGCGGCACCACAACCTCGAACACGTATCTATAA AACTCGTTGGTACATTCTTGCCGTTTTTACGGCGTACGTTGCAATGCAGT ATTTTATATGGAACTCCTTTGGACCCATCGCATCTTCAGTTAAAACAGCT TATGGATGGGAAAATTCAGATATTACATTGTTAGCCAGTTGGGATACCAT TCTATATGTGATTTTTTCGTTAGAAGTTTGTTGGCTAGTGCAAAAAAGAG GTAAGTACAAAATTCTCTTACAATCAATAGGTCATTATTAGGAATCTTAC CATTTTATGCCAAAACGCTCTGGCTGTTTTAAAAGTTGAAACTCGTAGTA GAGGTAATAATAATTCAAAGGGCCATAACTTCCGATAGCATATTCTGCTT gctttttattgcattttctgGGGTTACTAGCGACTTCGCAGGATTTTGAC ATAAGAACTAACAAGAGCTTTGTATAACAGGGGAAGGTATATTATCCTCA CATTATGGCGAAATTATTTTAACAGTTAATTATGTTTCTAAAATTCAGGT TTAAGGAAATCATTTCTCTGTTCATTGTTTCTGGTGGTCATTGGAGCTTT ATTTCGTTGCTTTGCTGTCCGAGAAACAAAAGTCAAAACGTACATGAACA CCGGACAAATCTTAAACGGTCTTGGTGGGATGTTAGCACAAGCTGCTGGT CCTGTGGTCTCCAGTAATTGGTTCCCACCAGATGAGCGGACCCGAGCCAC CGCTATTTCCACTTTAGCATCACAAGGCGGGCTTGCTCTATCTTATATCA TTGGACCAGCTATAGTCAAGGAAGAAGCACACATTCGGGAAAGTTTCCCA AACATCACAACACGCGCTTTAGAAGCGGAGCTACGAGATGAGATCAGCAC TTTCATGTACAAAGAACTTCTAGTCACATGTTTTATAACAGCATGTGCTA TGCTTTATTTCCCTAACAAGCCCAAACTACCACCATCACTGTCCGCTAGT TTAACAAAACTACAGTTTCGTGATGGATTTAAAAGACTTTTTAAAATGAG AAATTATTGGTATATTCTGTTCATTGCTGCATCTTCAACTGGTATCTACA GTGGTTGGGCAGCTGTGTTGTATTTGAACCTAAGTGATCATGGTCTTGGC ATCACACAAGTTAGTAGACTTATTATCTTTCAGACTTACAgtttgacgct ctctaattcgatttccaAAGGGAAagggattttcatcgaataatggagcg tatagAGCGTAGTTTATAAGACTTAAAGACTTAAAAAAGTATATTATGCA ATAATTTTTCATGCTTTCTTAAGTTACGGTAATTTCCACCGTtttggaag caaacgttcgactTTTTGGAAGCGATCCCTTTCACAAATCGAACGTTTAC TCCCATAATGTCAAGTTACGTAATTTAACAAAATATAAATacctcaacaa caacaaaaggcAATTTCACGGTCAAAACGAGTCATGACggtaattagaaa aaaaaactaataacgACTTCCCGGGGTTGATCATAATAATATcgaatttt taaattgtttggCCAATAGTAATAGGGAGAGGGTATATAGATCCTGAATT GCCAATGATTCTCTTCGACcgtgaaaaagctttttttttattttagagtg AATGTGGTTTAATGGGTTTTGCTTCAACAGTGTTCAGCGCAATCGGCGGA ATAGCGCTTGGTTATTTATCGGACAAGTGGCCCGGACACATGAGACATTT ATTGATCATATTATTTAGTTTGGCTTTTATCATGTTTTGTTGGATCACAG TGATTTGTTTGAAAGTGTTTACTTATAGATTGGGTAAGTGATTTTTTGCT GGCGCAATGCTCTATGGCTAATCTTTTGGTCCTACAGCAGATAGGTCTGA ATCTCAAAGAACCACAATCCGATGATATTCAATATTCCTCAGATTTTTGA AGAATTGAGGGCTTCAAAGTTTTAGGGCTCATTTTGCAAAACAAATAATA ATTAAACGGTTTCTTCCCATCCGCAAGATTTAATACCCCCTGAAAAACCG TTTTCCCCGACTATCCGCCCAATAAAATTCAcgccaaaatttcatttttt caaggtacattgtagaattttttttttcatttccccCTTAGATATGTTGT ACATTCCATGTCTGATTGGTGGCTTTTGTATCAACGGATCAACTCCCTTG ATGTACGAGATGATCATAGAATTAACTTACCCTATACCAGAAACTGTCAG CATCGGATTTCTTGGTGTGGTCAATAATATCTTCACTTTTGCTTTTTTGT TGCTCTTCAACGTCCCTAAAATAGGTAAGAAATTCGTTTTAATGAAAATC AGTCAAGACAAAGAATGTATAATGAATGACTCAATTGTTAACAAGACAAA TGTCAATCTGACAGAATCGACGATCAATTCAATAAACCTtattggagttt ttgatttttctaaaatagcGATGCATTGttggattgtttcgagtgtatta attacaatagaattcactcgaggaattcctaagaaaaatcaaaaactcca ataaggtctattgaaccaaatcgaacggATGTCTTTGGACAATTTACTTT TAACAATTTCTCAAAACTCatgaaaaacaatgaaactaatGAAAGTAACC AAACTTCAACAAAAAGTTATTGGACCTTATAAAAAGCGTTTAAACATAAT TTTATTACATTTCTTATTTTCTTAGGTGTTGTATGGACAAATTGGTGTTT GATAGCTACTTGCTTCATATGTCTATTACTCCTTACAAGATTCAAAGAGA AATATTATCGCATGAAAATTGATGGCATTTCGGTGACATCAATTGAAAGG AGAGTAGAAAGTACTATCGAAAGAAGACTACACGGAATAAATTCGATGGC ACCAACAGCTAAAAGGTTTATCTCTGATATGAGAGGGATTGCTGTTGTTA GTTTTTCAAGCGATGACATCATTACCTCACCCAATTTGGAGCCAACACCT AACCGAAGCTACAGTTATTGATGGAAATAACACGGCTAATGCAAATAAAC CAGCAACAACTTTGAAACTGTAAAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000396TCONS_00000396Clytia hemisphaericatranscript
TCONS_00000397TCONS_00000397Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000396-proteinTCONS_00000396-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002supercontigsc0000002:36021..40946 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.15 0.11 1.96 2.71 0.06 0.14 0.09 0.05 0.05 0.09 0.03 0.08 0.06 0.08 0.04 0.09 0.18 0.14 0.12 0.31 0.06 0.04 0.15 0.09 0.52 0.58 0.04 0 0.02 0.07