XLOC_000143 (gene) - C. hemisphaerica

Overview
NameXLOC_000143
Unique NameXLOC_000143
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000001:2535665..2545642-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000143 ID=XLOC_000143|Name=XLOC_000143|organism=Clytia hemisphaerica|type=gene|length=9978bp|location=Sequence derived from alignment at sc0000001:2535665..2545642- (Clytia hemisphaerica)
CCGTGCGCCCCGCCATTTTTGACCGCGCAGCGTGACTAATAAGAAATATT ATATAGGATAAGGTAAGGAGGATTGGGTCGGGGTTGGTAAATTAGAATAT TCGTCGTGCAAAAATGGCTTTCTTTTCTAATCGGTGTGTGAAGCCATGAG GTTCGTATCTCGATTGCTTATGTTTTATAATTTTACAATGTGATTTGAAA ACCAAGTACCTTTACTCGACCATTCGGTATTAAACTATTCAAAGTTTGAA TCATTTTTTGTGTTATTTTGGTGGTACTACGATGATGTTATTATTAATAA TTTGGCTATGCTTCTTTTCGTTACAGTACCCTCAGGCTCCAGAAACGCTT GGCCGCCAGCGTATTGAAGTGTGGCAAAAAGAAGATCTGGCTCGACCCTA ATGAATCCTCAGAAATTGCAAATGCTAATTCACGACAAAACATTCGCAAA CTTGTTAAAGATGGTTTGATTATCAAAAAACCACAAGTCGTACACAGTAG AGCTCGCACACGAGCAAACTTAGAAGCTAAACGTAAAGGTAGACATAAGG GATACGGTAAACGTCATGGTACTGCAAATGCACGTATGCCAGAAAAAGTT ATTTGGATGAACAGAATGCGCGTCCTCCGAAGATTATTACGCAAATATCG GGAGCAAAAGAAGATTGATCAACATTTGTAAGTTATTTTTTAAGCTGCTG CTTTTAGTTTAAGGTTACTTAGAAAAGTAGCATTAATGTCTTCTACACAA CCATGTTTATAACTAGTTAAAATAGCCACCTAACAGACATTTTTGTCACG GTGTAATATAATTGGCCAAAGTGGCTAAAGTTCTTAAGGGTATTGTGTAC CTACGACCCTGCCTATGCCCCGGACAGTCCAGGGCAAATGTCTGGGGTCT GGGGCTCCAATTTTTGCGCCATAAATTTACCCCGGACGTANGGCTCCAAT TTTTGCGCCATTAAATTTACCCCGGAAGAATATTTCAATGAATTAGAAAA AAGCCCGCGCGGTCAGCGATTCTATAAAAAGCGACCGCACGGGCTGTCTG GGGCGTCCGGGGTAGTCTCTCAAAAACAAATAATACGGACCCCGGGCACG CATAAAAAAAACCCCGGACTGCCCGGGGCATAGGCAGGGTCTTGTGTACC TGTACCAGCTTGTAGCTTCTGCTTGAACAGCTCATCCAACTTGCTGAATC CGATGCTTTGACATTTCTTTGATGCTGTTTGAGTCAGCTTGTCTAAGAGT GAAATAGTGGACAAGCACTGGTTCGTCCAGATTAGAAATAAGAGTTTTGA CCAATAAGGGTGGTCTCGGGCAACCTCTCCTTAATGAGAAAAAAAACATA GTCAGAATCACTCAGTTTATCTCAAAAACTGTTAACAAAAAAAACATACT TTGTTTCAATTATTGGTTCCATTAAAGAAGGTATTTAGAGTCAATATTCA AAACTTAGCTTAGGGTCTTGAAACATTGCTACCATTTAGGGGTCATTCAC ATATCGATTCTTCCCACGACTAACATCAAATTAGGCGAAGGGGTGGGGGT TGACTGTGACGTTAAGAAATTTCAACATAAATATTGATTTTTGAGATGTC TATTCTGTGACAAATGTTACTTTCCATATTTATATTCCTTGGTTCGCTTC GCTATTTTATAGAACAATTTTAACCAAAACAAACGGCCCTATCTTTATGT CTCATGTTCCTTTTGTTTAGACAGTCTGAGCAGCCCTTAAATTTTGCCAA CCATCGGTCTTTTTTGTGAAATGCTGCTATTCTGTTAATTATGATTACGG AGATATTAATTCCAGTATTAGCCTCCTTTTCAAAAATTTTCCAACCAGGA CATTTTTATTCCAACCCCCCCCCCCCGCTTATTAAGTTTTGAAAGTTATT CCAATTCCCCTGGCTATTAGGTACCAGAGAGTAGTCACCTAGAATTACAC CTTTTGAGAATTCAATTTCCAATGATTTTTGTCTAAAAGAATTCATTGAT AAAAAGCATTAGGAGGGCGTGGGGGTCCTGACGCAGCTTTCAATGCGACC CTGGGTAAAACGACCCCTAGTGAAAATACAACTGTTTCTTTGCTTGCATA TTATTCTTAAGAGTAGAAAATGTATCATATATTGATTAGAATGTATTGCG AAAGCTAAAAAAATTGTGCCTTTTTAAACTCTCAGTTTGAAATGAAAATA AATATGGAAGTATTTAACACAAATTAAAAATTTTTGTGTTAATAAAAACC CCCCTTAATTAAAACCAGCCGTGGTGTTATTAAAAAGCAAATAAAATTTG TGTTAATTTTTTGCGTGTTAATTTCAAGGCCTTTAAATACTTCATATTTA TTTTCATGTAATAAGGTACCGTATTACTTCGAATAAACGCCCGGGGCGTT TATCAAATTTTTTTCGATTTTAGGAGGGGCGTTTAAAAGAAGGGGGCGTT TATTAAATTANATTAAATTTTTTCGATTTTAGAAGGGGCCTTTAAAAGAA GGGGTGTTTATTAAATTATTTTAGTCTAAAGTCGAATATTTAGAGCAAAT ATACCCTTTGGATTAGTTCTTTGTCAGGATTTTAGTGCAAAATTTCTTTG GCTCAACGACTAAAATTGCATCGAAAACTGCTCTGGTTACAAGAAATGAC TAAAATCTTCCTTATTAAACCCAATCGATACTGGTACTGAAGTATTAAAG TCACAAGTTTCATATAAACGCCCCTCCCCTTGAGGGGGCGTTCATTCGAA GGAGGCGTTTATTTGAGGATGGCCTTTATTAAATAATTTTGCTTTAAGGA GGGGCGTTTATTCTAAGGGGCATTTAAAAGAAGGGGGCGTTTATTCGAAG TAATATGGTATGATCCCTGATTTCTGACTTCCCTAATTTAAATTTACAAA CTATGCAAAATTTTCAATAGTTCAGCCTTTTTAATCAATATTGTGTTTAT GTAATAATGCATTTATAGAACATTGACATTCTTTTGAAATAACACTTTCC CTCTCCAATTTTATAAGCAAAAGCAGGAAGATTTTTATTTTATCCTCGTG ATTTCTGAAATACATTCTTTTTAGATACTTCATTAAGTCAAAATTTGCAA AATTAAATTCCTAAAAATACGAAAAATTTTAAGGAAATATTCACATGCTT AATAGCAGTGTTGCAACTTTTCCGTCTGTAGACGGAAATCCGTCCAGCTG TGATACAAATACACTATTTCCGTCCTTTTAGCAGTAATGATTTTTGTTCA AAGGACTCGCTAAACCAAAGATTTTTTAACAAATTCCGTCCATAGTTACA AAACCTGGTTGCAACACTGTAATAGACAATAGGCTTATTAATCTTTCTTT TTTTTCAGATACCACGAACTCTACTTGAAAGCCAAAGGTAATGTTTTCAA AAATAAACGTGTCTTGATGGAATATATTCACAAGAAGAAGGCTGAAAAGA AGAGAAGCAAAGAACTCAGGTATGGAAATTAACCTTTCGGCTGATTTTTA AGTATAATGAAGCATAATGATACAAGTATTACTTGTATCATTATGCAAAC CTTGGAAACTCCCCCATTTATAAAGGCTTTAAGGTATTGAGTCACTTTAA ACATCATCAATACAGAAACCATTAATGAATTTTCAAAAAAAAATATTGTT TTATTTTTGTCGAATTGTTTATGATTTCTTTTAACCTTTTGAGGTAGGGC TGCTAGCAGCAAACCCATCCTGTATTTTTATAATCTGACATATACTGGAC AGTAGTCAGTCAGCTGGGGTCACATAAAAAGTGCTTTAGTTTCAAACAAA CTTCTGTTGGTTGTTTTGAATGGTTGTTTTGAATAAATATGACCATTGTG ATCACAAAATCATCAACCGAACAGTATCAAAATTACTAAACAGGGGTGTC CGGGAACATTCCTGTTTTTTATGACATCACAAGCAAAACAAACAAGACGA CTTAAAGTCGAAAATTTCGCATAATATTAGAACATCAACGACGAAAACGT GAAACGTGACTCCGGCAGCATTATGGATTTTGAATGAAGCGTTACACAAA ATATACACATTGTATTGTACACACAGGTCGTACCATTGAGTTTCAAGCCC GAAGGGCTAGAGGTCAATCTCTAACCTTTTCAGGCAAGAAAAATTGAAGC CTTAAAATATGCGCCGTATTTTTGATGGTGGATTGAATCTAGCAATTCCT TTGTTTTCAAGTGATATATTTTTCGAAATTAAGCGGTAAATTTTAGTTTA AAAAAACCAGGCGGGTCGCTCAAGGCCGCGCAACTTTGGTAGGATTTGTT GGCTTCAAATCCTACCAAAGAGATTGACCTTTAGCCCTTCCGGCTTGAAA CTCAATGGGTCGTACCCTGTTTTCTTATGAAAAATCTCAATCCATTAAAA ACAAAATGATTCTTTAAAAAATGCGACTAAAAAATTCCTTTTTATAAGCG TAATAAAGATATTTATATTCAGAATAAATCAGAGAACTGCAATATACAAT TTTATAAATTTTAAAGTTTTTTGAAAATGAAGAAGAAAAAATGACACTTG TGATTTCACTTGCGCAAAGTTTATATCAACTTCTTTCTATAAACAGTAGA ATTTTTCTAAAATTGAGAAAATCTGTTGTATCTTTCTGATATGAATGATG GTGCACCACCATCAAAATCATTGGGCTTTTCCAGAACAAATTTGAATATT GCAGAATATTTTGGAGGGGGAGGGGGGTTTGAGAATATAAAATTTTTTGG AAATTTACCCTGTGACTTTTGACCCACAAACAGCAGGTCTAACCTTCAGA CAAGCATCAGTTGACCCCATGGACAATCAAGAGGCCACTAAAGGCAAAAA TCAGTTTAGTAGTTGAGCTCCAGCTTCTGAACTAGAAAATGGCAGGGAAA AACTAGCCAACTTTAGAGAAATAATACTCTGTCTTTGAGATTTTCCAAAA TCTCAACGCAATAATCCATATTGGGGGGTTTACGATTTATTGCCTCCTTT GAAAATTCTTTTATTGTTTTTACCGTTTTAATAGACCCTTTTAATTAGCC TTTTATTCTATAATCAACTTTTTGTATGATATGTAGCTACATTTTTCAAC CTAGAAATTTCATTTTTAACCTGATGATGAGCAGTTAAGACTCAAAAAGC CTTGTTTGAATAAAATCAAATTTTTGTGTTGTTTATTTATTTTGAATCAT GGTTTAGTGGCTTGGAGAAAGTGAAAATAATCCATACAAAAATATATTAA GAAAAGCTCGTAACTTAAGGATACAGACTTCGGTCAAGATAGAATATGGG GATTTATTTACCACCACCTGTCACTCAAATTTTCAGATACAAATTGACTA AACCTTACTGAAAGTGATGCAATTATTTTCAATCTTCAATTATTTTCTGA TGCTATACTAGAGACCTTTAATATTAATTATTTCTAGGTTGACCGTAAAT CTTTCAAAATCATAAATTTATAAATGTTTACACACCAGTGAAAGTAGTAA GTGCTAAAAATAGTAAAAGAATCAATATTATACGTAATCAATTAATGGCC CTTCTAGCAAATCACAACAATGACTCCTTTATAACTCCTCTAACCGCATC CCATTAAAACAAACCCACCCCAATCTCTTGCCAGAAATATCTCAAAATAG ATATAGGGGAAAGATTCCATGGGAATCTCATACAAAACAAGGGTTCCAGG GGGGGGGGGTCTTGCAGTTACTCCTTGACACTATGTGGAGTAACTGCAAT TTTGGACATTTTCTACAGACACCACCACCCTTGCAGTTATTCCATAGTGT ACTAACTGATTTTACCCTCAAAATTGGTGTTNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNCATTTTACTGGGTACGTCTTATTAATGACCGTTCAAGA GTTAAATATCTCAATCATTTTCCAAGTTTGTTAAAATATCTTTCATGCCT TGATTGAAGAAAAAAATTACTGATTTTTTTTTTTTGACTTTTGAAAAAAA TGTTTTGAATTTTTTTGTTTCCGGAATTTTTAAAAACCTAAAATTTTAAG TGAAAAATTGAGAAATGTGCTCACTTAGTACACCATATCCTACCAAAATC TACAATTGTGGGCTTAGGCACCACCCATGTTGCAGTTAGTCCACTGGTGG AGTAACTGTTTTCCCAAATTTTGGTTTATATACCACCACGGTAGTAATTG TCATAGTGTTTATATAATAACTGCATGACCCCCCCCTGACGGTACCACTG GAGTTTTTAATGATTCAAAATGAAAATCCTGATTAGCAAAATGGGTATCA AGATCGGTGAAGTTTGATTGAAGCTCAATTAGTTTGATTTATTACCGTCA ACTGCTCTAACTTGGGACTATCTGACAAAACATGGGACGGCAATTCAGCC ACCATTTCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACC TCCAAAGTCATTTGATTTGAGTTAAGGAACGGCGTATTTAAAAATACACG ATTTCTCTTTCGATTTTACAGTAAGTGAAAATACAGACCAGATATGCAGC ACAGTCCCATGTTTCGATCAATCGTCCCAAGTTAGAGCAGTTGACGGTAC CTTGTTGCCCATTCTTTTTACACTCTGACGGTTTATTAGCAGACACCCAC ATTAAACCTTAAAAGGACATAACAAACTGTATGCAGCGGATACAAAATCA AAACAAATGTCACATGTCAAAATAAAAAATCAAACCAAATATGGCTATAN NNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTTTGGACACGTGATTTTAA TTGTTCTCTTTAATGACACGTGGTTCGCGCAATGTTTACATTTTACTACT TTAATGTCCCTTTAAAGAGCAGGCCAATATCTATCATCCCATCGGCCAGG CGATGTCAATCGAACTGTTCGATTATCTAACCATGTGTTTGATTGAGCTG ACTGATCGAACTTTTTAATCGAACTGCGATATAATCAAACATCAAACTGA AGATTTTTCGGTAAAGTTCAATTACTATTCGATCAGGTTCGATAATCGAA CACCTATTGTTCGATTTCGTTTGATGGTTCGATTACCAAAATTGGTTTGA TAGGGTTCGGTTGACATCATCACCTGGGCTGGCATCGGGGAGGAAAAGCT GAAGAAACTTTTTCTTAATCCAAACTCATCGAACAACAATCAAACTTCAT CAGATAAAAAACTGTCATCAAACTTACATAATCAAACGAAAAAAGGAAAC AAATATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA GCGCTGTTTTTTATCTTTGTGAGTGAGTCCACCTTTAGAATATTGGCCGT AGTACGCCCGCAGCCAAACGCCCACGCCATAATTTGCGCCCAAAAAAATT TCTCGCCACACACACACACACACAGAAAGACTATCGTAATACTTTCGCTA TGCGAAATTAAAAATCTAAGAAAGAAATTATTAACATATTATACACCAAT CAACGCAATTTTCGACATAGATTGAAGAAAGGTCAGAATCAACATTTGAA GATTTACATGAAAAGTTAAAACGGGTTGTAATCTTCTCAGAATCTAGAGT TACATTTAGAAATCAAATATATCCACCTAAAAGTTTTCTATATTGATTTT TGAGAGCTTTCAAATGGTGGTTTTTGATTTCCATTTTGAAGAGTTTGAAT TTTCAGATTTTTTTCCTCCTAGACCAGGTAAAAGTTACGTTGCAGGCACA AAGAACCTTACGTAAATTTTCAGCTATAGTTATTGACCTTTTTCTTAATC TACGTTTGAAGACACTCACAAAATTTTTTAGTTAGCTTGGACCTATTATG ACATCATCTGGGACTGAAAATGTTACTGGGGATGTCAGTTAAATATCTAA TTTGGATAGGTCCGGTTGACAACTTCCAGATATTTGTACTCTGTATCCAA TTTTTTTGTGACCTCAGCTGCCTGACTACAGGTTTTGGCTGAAATGTACA AATACGAATTTAGCGTTGTTTAGCTGTGTTTTCGACTGTCATTTGGTGCT GGGAAATTAAAATGAAAAGTCATAGCATGGATCTCGAGGCTAGGCCACTA CCAACTTTTTTTATAAAAGAGCAACTTTTAGCTTGTTTCAGTTTTCAAAT GTTTCTATTGTCATTCTTCAACCAATGCTTCAATTCTATCAAATGATATA TCGTTAGAACGATAATTCATCCATACTTTTCTTCTATACTTTTCATCTTT ATTTTCAACAATTTTTTTGTCTCAAAATTTGTAGTACTCTGGATTATCTT TTCAACGGTGTATGACTTTAACAGATTTGCGTTGATTATAATCTGCTAGG AAAAACTGAAATTGATGCACACTTAAAGCGAGTGGACTTGAAAAATACCT GTCATTCCTAAGGCTTTGAGGAGACAAATTTGGATTTGGCTAAAGATTCT TATGTAGAAATTTGCCTAGTATTCGATTCAATTTAGTTCAATAGAACTTA TCGGGGTTTTTGATTTTTCTAAAAAAGCGGTGCATTGTGGGATTGTTTCG AGTGTATTGCAATAGAAATCTCTTAGGTATTCCTCAAGGGAATTCTATTG TAATACACTCGAAACAATCCCACAATGCATCGCTTTTTTAGAAAAATCAA AAACTCCGATAAGGTCTATTCAAAAAGAGTCTTCCTGATCCTTATTAAGC TTTACTGTAAGCTAGAAAAGGATTTTACGACTTGAAATCTAACTGTCATC TTTCCTTCCTTTTTTACAGTGATCAAGCCGAAGCCAGACGTAACAAAGTC AAGGCTGCACGACAAAGGCGAGAAGAACGTCAAGCACAAAAACGTGCTGA AATCCTTCAAGCTTATGCCAAAGAGGACGGAGCCACCACCACACCCTCAT CCTAAATTATTCCTCAATAAATTCACCACCAGAAAATTCAACGGTGTTTT TCCTTTTTGTCCTCATTAGACCTTTTCATAAATACGTCACAAATATCACT TGCCTCGTATTCAAACGATGGTTTTTTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000266TCONS_00000266Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000266-proteinTCONS_00000266-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:2535665..2545642 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RPL1960S ribosomal protein L19 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2266.82 2269.77 2445.26 2587.14 2796.91 2242.19 2774.49 2918.09 3205.6 3058.23 3431.76 4036.74 4301.12 4438.59 4222.96 4529.34 4459.46 4859.95 2260.54 2441.02 3951.61 4001.93 3010.12 2829.31 3292.39 3514.09 3837.24 3647.79 2691.29 2725.03