XLOC_000140 (gene) - C. hemisphaerica

Overview
NameXLOC_000140
Unique NameXLOC_000140
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000001:2456748..2467092-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000140 ID=XLOC_000140|Name=XLOC_000140|organism=Clytia hemisphaerica|type=gene|length=10345bp|location=Sequence derived from alignment at sc0000001:2456748..2467092- (Clytia hemisphaerica)
CTAATTTGAGCTCTGATACTCACGGTAATCTATTCAAGCTGCTCACTACA
CTTTCTTATTCCCTTGCTATTTGTCCTATTTTTTTCTGATTTTGATCGAC
AGGTAGGTCCATTCAGCATGTTGCTTGTTTTTATTATTTCAGAAATTGTA
TAAAAAACCTGTCAAGTAAAATATGACAGAAAGGTTATCTTCTCCAAAAG
CAAGAGAGATTCAAAATATAAACATACATACAAAGACTTTATCATCAAAT
CTTTTCAAATTACGTGAAAATGACTCATTGTGTGACGTGACCCTCATTTC
TGATGGAATTGAAATCAGAGCGCACCGTGTGGTGCTGGCAGCATGTAGTG
AATACTTTCATGCTATGTTTACAAGTGGAATGAGCGAAACTGGCAAAGAC
GAGGTAAAACCCTTTATTTGTTGCATCTCAATAATGTGAACCCAAGGCTG
ATTTTTGCTTTGAAAATCTCAGTATTAAAAATTCTTGAGTCAATTTTTCA
TTCCATGGAAATTTTATTCATCCTGATCATTACCTAGCTCTAAACCTTTT
TCATTAATGATCATTTCGATTGATTCTAATTTTAGCAAGCTGAATAGGAT
ATTCTATAAGTCAGCCGATTAGAAAGATTGCATCACATTAGTATTATTCT
ATAATAATGTCAAGTTTTGTGCCATTACAAAAAAAAACATTTTCGAGCAC
TTTTGAAAAGTATTTGGACTGAAAATTGCTCTCAATTTTGACAAAAAATA
AATGGAGCCAAAATTTATAATTTTAAAATTGAACATGTTTTTTCAAGGTC
CCATTGAAAGGAGTGGATACAAAATCACTAACAGTGCTGGTCAATTATGC
ATACACCGGAGTAATCTTCATCGACGAAGTCAACGTACAAACTATTTTGG
AAACTGCCGATCTTCTACAATTTCAAACAGCAAAATCATTATGTTGTGAC
TTCATTAAGGAACAATTGAGTACTGAAAACTGTCTGGATATCTTCCAGTT
TGCAGATGTATTCCATTGTGATGACGTTTTGTCTTTATCTCAAGGTCTTT
TTAACAAAAACTGGAAGAAGATTGTGNATGATGTTTTGTCTTTATCTCAA
GGTCTTTTTAACAAGAACTGGAAGAAGATTGTGGAATCTGAGAGTTTCTC
TTCCATCAATTATCACACTTTTGTTAAACTGATATCTGATGATTGTTTGA
ATATTCACCAAGAAGGAGAGGTATGAAATAATTTTCTTTATTTCTCAACA
TTAAAAAGACCTCCTTTGAGACCTCGTAGGCCATGCCCAAAATAGGTAAT
CATTAGAACACGAACCACGAACGTTTTATTTTTGTTTTTGAGAACTTTTA
TACAAAAAACTCTTTTGTTTGCCACAAAACATATATTTTAGACTTTCGAC
ATTCTGCTGAAAATTATATTTTGAATTTATTGGAAAAATATGCAACGTTT
ATACATACTACTCTATCACTAACCCTGATATCCTGGCTTTAAACTTCTTT
TTTGATGTTTCTGGTTTACCGCCTGGTCTTCTCAAAGCTTTTTAGATTCA
AATATCAGAAGGTAGCATATATGTAAACTTTACCAATTCAAATATTGCGC
TGAGCTAAAAAAAAATTTAACCCTGGGTTATTAAGCATCTAGGTAGACCA
AGCTGTAAATAGCAGAAACATCAAAATAAGAAAATAATTTACAGCTTTGA
TATCCAGGCTGTTCTATCTCCATACTTTTGTTTTGTTGAATGATATCTTG
ACTTAAAAGTATTTATTCCTTCATGTTTAGGTCATTACTATGATTTCAAA
ATGGATTGAAGCTGACGAGATAAACCGCAAAGAGAAATTATTTTCACTTT
TCCAATACGTCAGATGGCCATACGTTGATCCAATCAAACTGCAAGAAATC
AAGAACCAACGCTTAATTGTTAACAATCGACTCTCACTACCAGAGATTGA
TAATGTGTTCTCTGCAACTGAAGATTACAGCGATGTTGACAAGGTGGATT
AAAGTGGATTAAATTTCGCGTGGCTTTTTTTTTTCCGAGAATCGAGAGTC
CAAAATTTTAGCCTCTGCCTCTTTTTCATCCAATTTCTTTTATTTTCTCT
AAGAGTTATTGGCCAAAATTAGGTTTTTTAATTTTTGGCGAGGACTAATT
TTCGCAAAAATGGCCAAAATTTGTGAAGATTGCAAAAATTAATCCACGCA
AAATGTAAGTTACTTGAATCTTTATTTGATTTAGGTTTTCACAGCATTTT
CTTCGCTTGATTTTATCCGAAGGCATAGTGGGAACAAGGAGGGGAGGTTT
TAGATATGATAGAGGACCCCGTCAACAAATTTCAAATGAATTCCAGGTGC
TAAAACTTCGGATCCCTCTATATTTTAAGAAATCAAGAAACTGTGTTGGT
TATGCAATTTACCTAATATTCTAATTCGAAAAAAGTACTATATTATCACA
AAAAAATGGCCAAAATTCGCAAAAGTCCACGCAAAATTTAATATAGCTGA
GTTCGTTGAATCTTTATTGGATTCAGGGTTTTCGCCGCTTTTTCTCTCGA
AGATCGAATTAGAGAGAGTTAATATGGATGTACTAATTTAAAACTTTGAC
TCATTAACTTTATTCTAGGTGGTTACTCTACATTCAGAAGATTGCAGCAT
CACACCTTCCCTTAGTATGAGACATTCCTATGCATCATGGCTGTATGTGC
TGGGTGGTGAACAATCATTCTTAATGGGAATGAAATCTACAGAAATTTTC
GAAATGAATACATCGACGTGGAGTTACGGTTTCTCATTGAACAGACCAAG
GACTTCTTTTGCTGCTGTAGCACATGGTGATAAATTGTGAGTTTCTTTCC
GTCTACTCTAGATCTAGTGGTAACCTCGTCCCTGTGTACTCCAGGCTTTA
TTTGCGTTACTGATGGACGCCAGAGAATAATATTATCTAGCGCCATCATT
AAGCATAAAAAAGCTGATTGATAATACGCAGGGAACGAGGTTGCTAGACT
AGTAATTTTAAATATTCCTAGACTGGAGTCGTATATAATCCATGCAAATC
AGTAATATGGATATGATAATAGGATAATTGTTACAGGATAATATCAGTTT
GTATAGACAATATGCCTCTTTCATTATTTTTTGCCTATTTTGTTATCTAA
AATCTTTAGTTGGACTGGTTGAAAAAGGGCAAGTAAAACAAACTTTTGTT
CCCACTTTGAAGCAAATGGATTTTAACATTGTCTGATTTCAAAAAGTGAG
ACTTCTGAGTGAGATATTATCCTTCCATTATGTTCTTCATTTTTTTTCGA
AACTGTAGGTATGTTATCGGTGGCATGTGTCTGGGTGAGAAATTAAGAAG
CGTCGAAAGATATTTAGAAAAAGAAGGCCGTTGGAAGCGTTTGGCCTCGT
TGAAAAATTGTAAAGGTAAAGATAATTTATTCACCCAGTGCTCAAATCTT
TGTTGGATGAATGTCTCTCCTAAAAGGAAATTTCAATATACGCCCATCGA
CAAAAATTCTTAAACGCCAGGGGCGCTTATTCGAAGAAGTAAGGTGTGAT
TTTGATAAGCATTATTAGTAAAAATATGTATTATGCATGCTATTTTTATT
GTTTTTGAAGGTTTAAATGTTGGGAAATTTTGTAAACTGAGGCTCGAGTT
TTTTCTAATATTTGAGCATGGATATAGTGATAAGAATTGTGTTCATCCAA
TCAAGTTTTTGATTAAAAAAAATAGGAATTTCATTTTTTTAATCCGTCTA
CTGAGTCATCTAGACTGGGAGCACTTAAAAAAATTATTTGATTTTAAGTA
GCCTGGAATTATTAGGATTATTACTAGAATTAATTATGATTTTAGAGACT
TAAAGTAGGATTTCAGTGATTTTCTTTCAAATTGGTAATCTAGTCAAATA
CTCCTAGTCTCTGAACTTAACGTCGTCAAACATTATCCAAAAACGAGAAG
ATTATATTCTATTCTATAGGTTTGCCCACTAAAAAATCTTCCAACCATTC
TAGGTGACGTGAAAGCGGCAGTAATAGATGACGTTGTTTATGTAGCTGGT
GGATCTAGTGGCGGCGAACCCGCCTGCAAGTAAGAATTTCTCTTATTCTG
TTTTGCTCACTTTTCATACTTTGTAAATGGGTCTTTTCATAAATTACTTT
GAGTGCAACATCTGTCTCGTTTTGAAAGCATCACTAAGGTTATTTTAAAT
CCCTTGAAGATTCAGGTGTAAACTTTTTAAATAGAGTAAACTTCTTTTAA
TTCACCTGGGAGATAATTCATCTGGGAATCGATTACCATAGCAACATTTG
AATGTGGGGTGAGCGTAAGGTCTCAGCCAACTTTCTCCGATTCGAACCTC
TATGCTCTGAATCTCTCTGTAATTCGAACTAAAGCATTGGTCCGCTCAGC
TGGAAAGTCGTATAAAAACACTCTCTGTAATTCGAATCTTTTTCCAATTC
GTAGAAAATTCTTGGCCCTTGAAGGTCGAAANAATTCGAATTTTTCTCCA
ATTTGCAGAAAATTGTTGGTCCTATGAAGATTGATTTTAGAGAGAGTCAA
CTGTATAAGTGAAGACCAGGCCCGGCGGAACAACCGTAAGAGTGGGGAGG
ATGAAGGCTCAAAATGAGATAAAATTTGCTAGGAATTGAGAAAAAATCTC
CTTTGCTTAAAAGTGGGGAAGCTGAAGTCTCCCCAGCCTGAAGACGAATG
GGTGCACTTTCTTTTCTTCCTATAGATACGTCGAACGATATGATGAGAGT
AATAACCAATGGACGCCAGTAGCCTGTATGAAGTCTAGACGACGAAGGTT
TGGCCTCTGCCAGTTCAAAGGCAAACTATACGCTTTCGGTGGATTCCAAG
ATAGCCTGGGTGACTTGAAAGCGTGTGAAGTTTATGATCCAGAGGCTAAT
ATATGGGAGAGTATTGCGTCTATGAAAACGAATCGTTGTGATCTTGGAGT
AGCTGTTTTGTCAGGTAAGCTCAATTTTCTGGCGAGTAAGCTCAAGCTTA
ATTGCAAAATTTGTTAAACTTATTCTTTCAAAATACCCAGGGGGGGGGCA
CGCAGTTACTACAAGACATGATGTGTAGTAAGTGCTTTTTCAACACTATT
TTTCAGGACCACCACCCTTTGCAGTTACTACACCTTGGTAGTAACTGTTT
TCAGAAAAGATTTCCAGGTACCACCCCTGTTTTTGAGTGATATCATCAAA
AACATGCTCGAAATTACCCTAAATTGCGACTATTTTTCTACCTAAAGCCA
TTTTTGCACTAGATTTTCTCTTAATTTACTTGGTTAACAGCTGTTGAGAA
CATTTTAATGATAATTAGGGAAAGCATAATTTCAAAGTTGGGTCTGAGAA
AAATTTCAAATTTTTTTTCGTCCATNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNCTACACTGTGTAGTAACTGTTTTCATAA
CTTCTGAATACAGTACCACCACGGTAGTAAGTGTCATACTGTCTTGTAGT
AACTGCGTGCCCCCCCCCCTGAAATACCCTGGATTTAACGGTCAAGATAA
AAGGAACTCTTTACTTTCATTTCTGTATGGACCTCTAGATTATTGATATC
AAACTAATCCATGTATTGTGTTTACTCCGATAGCTCATTTACTGCTCATA
TGAAATCCGCGTATAGTCATTGTGATTTATGATCATGACCATAGAAGTCT
TTCATATTTGTTGAAGTTACGTAACTTCCGCTATTATTACTTTCGATTTT
CGTCAGGGATCACCTTTTACAGATCCGAACGTTTGCTTCCATAATGGTAA
AAAATTACGTAACTTAACCGAACATGAAAAACCTCTAGATACAGATCTTA
GAGAGTCAGAAATTTGGATTGTCCCAATTTGAATCACGGGAGGGAATTCA
TAATGGTAGATTCTCGATAAAAGACCCTCTAAAAACCACCACGTCAAGTC
ATAATGACTGTACACGGATTTGCATACGATCAGTAACTGAGTCCATACTG
AGGGAGTAGTNCAGCCAACTTTCTCTAATTCGAACCTCTATGCTCTGAAT
CTCTCTGTAATTCGAACTAAAACATTGGTCCGCTCAGCTGGAAAGTCGTA
TAAAAACACTCTCCGTAATTCGAATTTTTCTCCAATTTGCAGAAAATTGT
TGGTCCTATGAAGATTGATTTTAGAGAGAGTCAACTGTATAAGTGAAGAC
CAGGCCCGGCGGAACAACCGTAAGAGTGGGGAGGATGAAGGCTCAAAATG
AGATAAAATTTGCTAGGAATTGAGAAAAAAATCTCCTTTGCTTAAAAGTG
GGAAAGCTGAAGTCTCCCCAGCCTGAAGACGAATGGGTGCACTTTCTTTT
CTTCCTATAGATACGTCGAACGATATGATGAGAGTAATAACCAATGGACA
CCAGTAGCCTGTATGAAGTCTAGACGACGAAGGTTTGGCCTCTGCCAGTT
CAAAGGCAAACTCTACGCTTTCGGTGGATTCCAAGATAGCCTTGGTGACT
TGAAAGCGTGTGAAGTTTATGATCCAGAGGCTAATATATGGGAGAGTATT
GCGTCTATGAAAACGAATCGTTGTGATCTTGGAGTAGCTGTTTTGTCAGG
TAAGCTCAATTTTCTGGCGAGTAAGTTCAAGCTTAATTGCAAAATATCTA
AGATTTGTTAAACTTATTCTTTTAAAATACCCCTGATTTAACGGTCAAGT
TAATGCCCTTAATTTTCGCGCACTACCACTGCGTGGAAATTAAAGGGTGC
GCGCACTAGGTCGCGCGAAAATTAAAAGGTGCGTGAATTAGCAAATAAAT
TAATAAACCCAATTAATCATGATTTTTGATAAAAATATGATATTCATAGT
ACAGTGTTTAGCAGACACCATCGAGCAAACAAGATTAGTGTCCGCTAATT
AAAGTGTTGTATTTACTCCGATAGTTCATTTACTGCTCATATGAAATCCG
CGTATAGTCATTGGGATTTATGATCATAACCATAGAAGTCTTTCATATTT
GTTGAAGTTACGTAACTTCCGCTATTATTACTTTCGATTTTCGTCAGGCA
TCACCTTTTACAGATTCGAACGTTTGCTTCCATAATGGCAAAAAATTACG
TAACTTAACCTAACATGAAAAACCTCTATACAGATCTTTAGATTGTCCCA
ATTTGAATCACGGGAGGGAATTCATAATGGTAGATTCTCAATAAAAGACC
CTCTAAAAAAACACCACGTCAAGTCACAATGACTGTACACGGATTTGCAT
ACGAACAGTAACTACTGAGTCCCTACTGAGACAGTAGTTGTCTGTTTTGT
TACTATTTCTTTGGCTATATCTACCCATATACCAGTACGTTGAGTTAAAC
ATTTAGGTTACATCTACGTGGCGGGTGGTGTCAACTCTTACACCGGTTCC
ATCAACACAGTGGAAAGATACGACCCGTCTTCAGATCAATGGACGTTGTG
CCATCCTTTGTCGCAAGCCAGGGGTGGTCACTCCATGGTCAGTTATTTCG
GACGGCTAATAGTCATTGGTGGAATGAACAGTTACATGCAAACGTGCCGC
GATGCTGAGTGGTATAATGAGGTATTATTAGTTTTTATAAATACTTCCGT
TTTCAAAATCCCCTTCTCTCTAAGTGACCTTGTGAGAGTTTACTAGGGGC
TGTTAATACGGTTAGCCAATTCTTTGGTTCGTATATAAAAATAGCGTTTT
TAAGCAAATAATGAATGCATAAGCAGGAAACTTCGAGTATCGAGAAGAAA
TATATTAAACCGTTTCTTTAATCCTTATGTAGAAATAGTGTTTTATGTAT
GGGCTCGCATTTTCTTCAAATCAGGTAACTGACCAATGGACGTCACTAGC
ATACACTAACGTGCCTCGATTCGGAAGCGTGGCTGTTGTTCTTCCATTCT
GTAAACAAGGTTCTGGACCCTCGCCTCCACCGGCCTCAAAAAGCCAGGAC
AATGAAGAGGAATGAGAGTATGTATGGAATTTTGACAAAGAAAGGGAGTG
ATGCTTTTTCTCCCTTTTTGATTTTTCACTTTAACTTTGAAGAAAAACTG
CCCACATACTTTACGGCACTGGGGCATTTTTAAATGACACAGACCAAGAC
TTGCCAAGACGACTACACGTTTTTTTATAAGGATATGCCTTAAAATGTTC
TTAACTTGTTCTTAGTAATTTGGACATCTAAGCCTTATGTTCTCATATAG
CTTGTTCTTAGAAAAAAACGTGTATAACTTTTTAGATTTAGTCGGAACAA
TAAGCCACAGCCATCTTCCTGTAACACAATAATGAAGAATGCATAACATG
TTCTCTTGACGCGTCTTATCTATTGACTATACAGTCAACTTTTTCTAATT
CGAACTTCTATAATTCGAATCTTTCTGTAATTCGAACTAAAACATTGGTC
CCCTCAGCTGGAAATTAGTTTTAAATGCTCTCTTTAATTTCTCTAATTCG
AATAAAAGTCTAAATAGTCCCTTGAAGATCGAATTAGAGAGAGGCAACTG
TAGATTTAGTCCTTTAGGGATCATACAAATGTTGTTTAGCGTTAACTGAT
TAAGGGTTTTCATGGTAATAAAAGAAATAAACTTAATAAGGGTGTATGAT
TTTATTCATTTTTGTCGGCTGAAAAAAATTAATGATTTGATATGTATTTG
ATTGATAATTTATGAAAATTATTATTGACAAGGAATCATAACAATGTCAT
TAATAATTTAACAAAAAATATCATTCTTTGGATTGATATGTTTTCACACA
TTTCAAACTCTGTTGCAACCCGAACACTCAGGGGGTGGAAGTTACACTAC
AAAAAATAACAATACAGTGGAGTCTCCATAACTCAAACACTCACGGGGAA
CACAAATTTGTTCAAGTTAAGGAAATTTCGAGTTATAGAGTAAGGTTTAT
AAGGCATTGTTAACTGAAGGGACCTGAAAACTTGCTCGAGTTAAGGAAAA
TTTCGAGTTATAGAGGTTCGAGTTAAAGAGACTCACTGTATAAACCCTTT
TTAAAGAGATTTTGAGGGGAATCTGTCTTTCAAACTCTTCAAATTGTACA
TACATTTTATTATAAGTTTTTATTTATATAGTTTATTATTTGTTACTGTT
GTGCACAGGAAATTATGAACATTGTGTTTTCGGCAATTTAGACAAAAATA
GTTTTTTATATTAAGCAATATTATGGAAAAATTGAATTTTTATGACTCGG
AGAAAGCAGCGCATGTTTTTTAATAATTCTACCTCTATATCAGGCTTGCA
TTATGCTTAGCATTCTATTGTTCTTAAACAAAAGATCCAATGTTTAGGTA
CCAAAAGCTGAGCCTATGTATCTACTTATAGAAAAAAACATGCAGCCCTC
TGCTGTACTAAGTTGTACTGTATTTATGATTAAGGTTTTTGATTTTAAGT
ATCGGAACTAGTAGGACCCGAATTTCCAGAGGCAAATTACATTCCTAACT
GAAATATAACCACTGACCTTTACGAACCCTCTGAAAGTCATACCAGTTTT
AAAAGTTTGTTCCAAAGATATTGTCAGTCTGTAATTTTTTGCATATTACT
ATCGAAGGGGAAAAGACTTTCGGACTACTTAGGACTATTGTTTCGGCTCT
AAATACAGAAAGAGTTTCATGGTTCGAAAAAGAAAGCTTGTAACCTTAGT
TTATTGACACTTTTTACCGTTTATTTATGAATTTTTTTTCAGTTTTTTGA
ATTTTTAGTTGCTGCTTATATATAAATATTATAGTATTGGACATTTTATA
AAAAGTGAAATTTGATTTTTATTGATTGTATTTTTACTTAAAGTCGCGAA
TTTAATGAAATAGCCTGTTAATATTATCGATCAGTGTAAAAAATG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000259TCONS_00000259Clytia hemisphaericatranscript
TCONS_00000258TCONS_00000258Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000259-proteinTCONS_00000259-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:2456748..2467092 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.97	1.99	1	0.94	14.13	10.14	6.96	7.7	5.72	6.27	6.3	4.82	7.44	7.06	4.15	4.18	5.46	6.09	6.01	6.72	6.91	6.52	3.12	4.21	8.62	8.19	7.17	6.18	4.97	4.53