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TCONS_00000258 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000258
Unique NameTCONS_00000258
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3858

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000258 ID=TCONS_00000258|Name=TCONS_00000258|organism=Clytia hemisphaerica|type=transcript|length=3858bp
ctaatttgagctctgatactcacggtaatctattcaagctgctcactaca
ctttcttattcccttgctatttgtcctatttttttctgattttgatcgac
aggtaggtccattcagcatgttgcttgtttttattatttcagaAATTGTA
TAAAAAACCTGTCAAGTAAAATATGACAGAAAGGTTATCTTCTCCAAAAG
CAAGAGAGATTCAAAATATAAACATACATACAAAGACTTTATCatcaaat
cttttcaaattaCGTGAAAATGACTCATTGTGTGACGTGACCCTCATTTC
TGATGGAATTGAAATCAGAGCGCACCGTGTGGTGCTGGCAGCATGTAGTG
AATACTTTCATGCTATGTTTACAAGTGGAATGAGCGAAACTGGCAAAGAC
GAGGTCCCATTGAAAGGAGTGGATACAAAATCACTAACAGTGCTGGTCAA
TTATGCATACACCGGAGTAATCTTCATCGACGAAGTCAACGTACAAACTA
TTTTGGAAACTGCCGATCTTCTACAATTTCAAACAGCAAAATCATTATGT
TGTGACTTCATTAAGGAACAATTGAGTACTGAAAACTGTCTGGATATCTT
CCAGTTTGCAGATGTATTCCATTGTGATGACGTTTTGTCTTTATCTCAAG
GTCTTTTTAACAAGAACTGGAAGAAGATTGTGGAATCTGAGAGTTTCTCT
TCCATCAATTATCACACTTTTGTTAAACTGATATCTGATGATTGTTTGAA
TATTCACCAAGAAGGAGAGGTCATTACTATGATTTCAAAATGGATTGAAG
CTGACGAGATAAACCGCAAAGagaaattattttcacttttccaATACGTC
AGATGGCCATACGTTGATCCAATCAAACTGCAAGAAATCAAGAACCAACG
CTTAATTGTTAACAATCGACTCTCACTACCAGAGATTGATAATGTGTTCT
CTGCAACTGAAGATTACAGCGATGTTGACAAGGTGGTTACTCTACATTCA
GAAGATTGCAGCATCACACCTTCCCTTAGTATGAGACATTCCTATGCATC
ATGGCTGTATGTGCTGGGTGGTGAACAATCATTCTTAATGGGAATGAAAT
CTACAGAAATTTTCGAAATGAATACATCGACGTGGAGTTACGGTTTCTCA
TTGAACAGACCAAGGACTTCTTTTGCTGCTGTAGCACATGGTGATAAATT
GTATGTTATCGGTGGCATGTGTCTGGGTGAGAAATTAAGAAGCGTCGAAA
GATATTTAGAAAAAGAAGGCCGTTGGAAGCGTTTGGCCTCGTTGAAAAAT
TGTAAAGGTGACGTGAAAGCGGCAGTAATAGATGACGTTGTTTATGTAGC
TGGTGGATCTAGTGGCGGCGAACCCGCCTGCAAATACGTCGAACGATATG
ATGAGAGTAATAACCAATGGACGCCAGTAGCCTGTATGAAGTCTAGACGA
CGAAGGTTTGGCCTCTGCCAGTTCAAAGGCAAACTATACGCTTTCGGTGG
ATTCCAAGATAGCCTGGGTGACTTGAAAGCGTGTGAAGTTTATGATCCAG
AGGCTAATATATGGGAGAGTATTGCGTCTATGAAAACGAATCGTTGTGAT
CTTGGAGTAGCTGTTTTGTCAGGTTACATCTACGTGGCGGGTGGTGTCAA
CTCTTACACCGGTTCCATCAACACAGTGGAAAGATACGACCCGTCTTCAG
ATCAATGGACGTTGTGCCATCCTTTGTCGCAAGCCAGGGGTGGTCACTCC
ATGGTCAGTTATTTCGGACGGCTAATAGTCATTGGTGGAATGAACAGTTA
CATGCAAACGTGCCGCGATGCTGAGTGGTATAATGAGGTAACTGACCAAT
GGACGTCACTAGCATACACTAACGTGCCTCGATTCGGAAGCGTGGCTGTT
GTTCTTCCATTCTGTAAACAAGGTTCTGGACCCTCGCCTCCACCGGCCTC
AAAAAGCCAGGACAATGAAGAGGAATGAGAGTATGTATGGAATTTTGACA
AAGAAAGGGAGTGATGCTTTTTCtccctttttgatttttcactttAACTT
TGAAGAAAAACTGCCCACATACTTTACGGCACTGGGGCATTTTTAAATGA
CACAGACCAAGACTTGCCAAGacgactacacgtttttttataaggatatg
ccttaaaatgttcttaacttgttcttagtaaTTTGGACAtctaagcctta
tgttctcatatagcttgttcttagaaaaaaacgtgtataactTTTTAGAT
TTAGTCGGAACAATAAGCCACAGCCATCTTCCTGTAACACAATAATGAAG
AATGCATAACATGTTCTCTTGACGCGTCTTATCTATTGACTATACAGTCA
ACtttttctaattcgaacttctataattcgaatctttctgtaattcgaac
taaaacattggtcccctcagctggaaattagttttaaatgctctctttaa
tttctctaattcgaataaaagtCTAAatagtcccttgaagatcgaattag
agagaggcaACTGTAGATTTAGTCCTTTAGGGATCATACAAATGTTGTTT
AGCGTTAACTGATTAAGGGTTTTCATggtaataaaagaaataaacttAAT
AAGGGTGTatgattttattcatttttgtcggctgaaaaaaattaatgatt
tgaTATGTATTTGATtgataatttatgaaaattattATTGACAAGGAATC
ATAACAATGTCATTaataatttaacaaaaaatatcattcttTGGATTGAT
ATGTTTTCACACATTTCAAACTCTGTTGCAACCCGAACACTCAGGGGGTG
GAAGTTACActacaaaaaataacaatacagtggagtctccataactcaaa
cactcacggggaacacaaatttgttcaagttaaggaaatttcgagttata
gagtaaggtttataaggcattgttaactgaagggacctgAAAACTTGCTC
GAGTTAaggaaaatttcgagttatagaggttcgagttaaagagactcacT
GTATAAACCCTTTTTAAAGAGATTTTGAGGGGAATCTGTCTTTCAAACTC
TTCAAATTGTACATACATTTTATTAtaagtttttatttatataGTTTATT
ATTTGTTACTGTTGTGCACAGGAAATTATGAACATTGTGTTTTCGGCAAT
TTAgacaaaaatagttttttatattaagcaatattatggaaaaattgaat
ttttatgaCTCGGAGAAAGCAGCGCATGTTTTTTAATAATTCTACCTCTA
TATCAGGcttgcattatgcttagcattctattgttcttaaacaaaagatc
caatgtttaggtaccaaaagcTGAGCCTATGTATCTacttatagaaaaaa
acatgCAGCCCTCTGCTGTACTAAGTTGTACTGTATTTATGATTAAGGTT
TTTGATTTTAAGTATCGGAACTAGTAGGACCCGAATTTCCAGAGGCAAAT
TACATTCCTAACTGAAAtataaccactgacctttacgAACCCTCTGAAAG
TCATACcagttttaaaagtttgttcCAAAGATATTGTCAGTCTGTAATTT
TTTGCATATTACTATCGAAGGGGAAAAGACTTTCGGACTACTTAGGACTA
TTGTTTCGGCTCTAAATACAGAAAGAGTTTCATGGTTCGAAAAAGAAAGC
TTGTAACCTTAGTTTATTGACACTTTTTACCGtttatttatgaatttttt
ttcagttttttgaatttttagttgCTGCTTATATATAAATATTATAGTAT
TGgacattttataaaaagtgaaatttgatttttattgatTGTATTTTTAC
TTAAAGTCGCGAATTTAATGAAATAGCCTGTTAATATTATCGATCAGTGT
AAAAAATG
Run BLAST on NCBI

transcript from alignment at sc0000001:2456748..2467092-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000258 ID=TCONS_00000258|Name=TCONS_00000258|organism=Clytia hemisphaerica|type=transcript|length=10345bp|location=Sequence derived from alignment at sc0000001:2456748..2467092- (Clytia hemisphaerica)
CTAATTTGAGCTCTGATACTCACGGTAATCTATTCAAGCTGCTCACTACA CTTTCTTATTCCCTTGCTATTTGTCCTATTTTTTTCTGATTTTGATCGAC AGGTAGGTCCATTCAGCATGTTGCTTGTTTTTATTATTTCAGAAATTGTA TAAAAAACCTGTCAAGTAAAATATGACAGAAAGGTTATCTTCTCCAAAAG CAAGAGAGATTCAAAATATAAACATACATACAAAGACTTTATCATCAAAT CTTTTCAAATTACGTGAAAATGACTCATTGTGTGACGTGACCCTCATTTC TGATGGAATTGAAATCAGAGCGCACCGTGTGGTGCTGGCAGCATGTAGTG AATACTTTCATGCTATGTTTACAAGTGGAATGAGCGAAACTGGCAAAGAC GAGGTAAAACCCTTTATTTGTTGCATCTCAATAATGTGAACCCAAGGCTG ATTTTTGCTTTGAAAATCTCAGTATTAAAAATTCTTGAGTCAATTTTTCA TTCCATGGAAATTTTATTCATCCTGATCATTACCTAGCTCTAAACCTTTT TCATTAATGATCATTTCGATTGATTCTAATTTTAGCAAGCTGAATAGGAT ATTCTATAAGTCAGCCGATTAGAAAGATTGCATCACATTAGTATTATTCT ATAATAATGTCAAGTTTTGTGCCATTACAAAAAAAAACATTTTCGAGCAC TTTTGAAAAGTATTTGGACTGAAAATTGCTCTCAATTTTGACAAAAAATA AATGGAGCCAAAATTTATAATTTTAAAATTGAACATGTTTTTTCAAGGTC CCATTGAAAGGAGTGGATACAAAATCACTAACAGTGCTGGTCAATTATGC ATACACCGGAGTAATCTTCATCGACGAAGTCAACGTACAAACTATTTTGG AAACTGCCGATCTTCTACAATTTCAAACAGCAAAATCATTATGTTGTGAC TTCATTAAGGAACAATTGAGTACTGAAAACTGTCTGGATATCTTCCAGTT TGCAGATGTATTCCATTGTGATGACGTTTTGTCTTTATCTCAAGGTCTTT TTAACAAAAACTGGAAGAAGATTGTGNATGATGTTTTGTCTTTATCTCAA GGTCTTTTTAACAAGAACTGGAAGAAGATTGTGGAATCTGAGAGTTTCTC TTCCATCAATTATCACACTTTTGTTAAACTGATATCTGATGATTGTTTGA ATATTCACCAAGAAGGAGAGGTATGAAATAATTTTCTTTATTTCTCAACA TTAAAAAGACCTCCTTTGAGACCTCGTAGGCCATGCCCAAAATAGGTAAT CATTAGAACACGAACCACGAACGTTTTATTTTTGTTTTTGAGAACTTTTA TACAAAAAACTCTTTTGTTTGCCACAAAACATATATTTTAGACTTTCGAC ATTCTGCTGAAAATTATATTTTGAATTTATTGGAAAAATATGCAACGTTT ATACATACTACTCTATCACTAACCCTGATATCCTGGCTTTAAACTTCTTT TTTGATGTTTCTGGTTTACCGCCTGGTCTTCTCAAAGCTTTTTAGATTCA AATATCAGAAGGTAGCATATATGTAAACTTTACCAATTCAAATATTGCGC TGAGCTAAAAAAAAATTTAACCCTGGGTTATTAAGCATCTAGGTAGACCA AGCTGTAAATAGCAGAAACATCAAAATAAGAAAATAATTTACAGCTTTGA TATCCAGGCTGTTCTATCTCCATACTTTTGTTTTGTTGAATGATATCTTG ACTTAAAAGTATTTATTCCTTCATGTTTAGGTCATTACTATGATTTCAAA ATGGATTGAAGCTGACGAGATAAACCGCAAAGAGAAATTATTTTCACTTT TCCAATACGTCAGATGGCCATACGTTGATCCAATCAAACTGCAAGAAATC AAGAACCAACGCTTAATTGTTAACAATCGACTCTCACTACCAGAGATTGA TAATGTGTTCTCTGCAACTGAAGATTACAGCGATGTTGACAAGGTGGATT AAAGTGGATTAAATTTCGCGTGGCTTTTTTTTTTCCGAGAATCGAGAGTC CAAAATTTTAGCCTCTGCCTCTTTTTCATCCAATTTCTTTTATTTTCTCT AAGAGTTATTGGCCAAAATTAGGTTTTTTAATTTTTGGCGAGGACTAATT TTCGCAAAAATGGCCAAAATTTGTGAAGATTGCAAAAATTAATCCACGCA AAATGTAAGTTACTTGAATCTTTATTTGATTTAGGTTTTCACAGCATTTT CTTCGCTTGATTTTATCCGAAGGCATAGTGGGAACAAGGAGGGGAGGTTT TAGATATGATAGAGGACCCCGTCAACAAATTTCAAATGAATTCCAGGTGC TAAAACTTCGGATCCCTCTATATTTTAAGAAATCAAGAAACTGTGTTGGT TATGCAATTTACCTAATATTCTAATTCGAAAAAAGTACTATATTATCACA AAAAAATGGCCAAAATTCGCAAAAGTCCACGCAAAATTTAATATAGCTGA GTTCGTTGAATCTTTATTGGATTCAGGGTTTTCGCCGCTTTTTCTCTCGA AGATCGAATTAGAGAGAGTTAATATGGATGTACTAATTTAAAACTTTGAC TCATTAACTTTATTCTAGGTGGTTACTCTACATTCAGAAGATTGCAGCAT CACACCTTCCCTTAGTATGAGACATTCCTATGCATCATGGCTGTATGTGC TGGGTGGTGAACAATCATTCTTAATGGGAATGAAATCTACAGAAATTTTC GAAATGAATACATCGACGTGGAGTTACGGTTTCTCATTGAACAGACCAAG GACTTCTTTTGCTGCTGTAGCACATGGTGATAAATTGTGAGTTTCTTTCC GTCTACTCTAGATCTAGTGGTAACCTCGTCCCTGTGTACTCCAGGCTTTA TTTGCGTTACTGATGGACGCCAGAGAATAATATTATCTAGCGCCATCATT AAGCATAAAAAAGCTGATTGATAATACGCAGGGAACGAGGTTGCTAGACT AGTAATTTTAAATATTCCTAGACTGGAGTCGTATATAATCCATGCAAATC AGTAATATGGATATGATAATAGGATAATTGTTACAGGATAATATCAGTTT GTATAGACAATATGCCTCTTTCATTATTTTTTGCCTATTTTGTTATCTAA AATCTTTAGTTGGACTGGTTGAAAAAGGGCAAGTAAAACAAACTTTTGTT CCCACTTTGAAGCAAATGGATTTTAACATTGTCTGATTTCAAAAAGTGAG ACTTCTGAGTGAGATATTATCCTTCCATTATGTTCTTCATTTTTTTTCGA AACTGTAGGTATGTTATCGGTGGCATGTGTCTGGGTGAGAAATTAAGAAG CGTCGAAAGATATTTAGAAAAAGAAGGCCGTTGGAAGCGTTTGGCCTCGT TGAAAAATTGTAAAGGTAAAGATAATTTATTCACCCAGTGCTCAAATCTT TGTTGGATGAATGTCTCTCCTAAAAGGAAATTTCAATATACGCCCATCGA CAAAAATTCTTAAACGCCAGGGGCGCTTATTCGAAGAAGTAAGGTGTGAT TTTGATAAGCATTATTAGTAAAAATATGTATTATGCATGCTATTTTTATT GTTTTTGAAGGTTTAAATGTTGGGAAATTTTGTAAACTGAGGCTCGAGTT TTTTCTAATATTTGAGCATGGATATAGTGATAAGAATTGTGTTCATCCAA TCAAGTTTTTGATTAAAAAAAATAGGAATTTCATTTTTTTAATCCGTCTA CTGAGTCATCTAGACTGGGAGCACTTAAAAAAATTATTTGATTTTAAGTA GCCTGGAATTATTAGGATTATTACTAGAATTAATTATGATTTTAGAGACT TAAAGTAGGATTTCAGTGATTTTCTTTCAAATTGGTAATCTAGTCAAATA CTCCTAGTCTCTGAACTTAACGTCGTCAAACATTATCCAAAAACGAGAAG ATTATATTCTATTCTATAGGTTTGCCCACTAAAAAATCTTCCAACCATTC TAGGTGACGTGAAAGCGGCAGTAATAGATGACGTTGTTTATGTAGCTGGT GGATCTAGTGGCGGCGAACCCGCCTGCAAGTAAGAATTTCTCTTATTCTG TTTTGCTCACTTTTCATACTTTGTAAATGGGTCTTTTCATAAATTACTTT GAGTGCAACATCTGTCTCGTTTTGAAAGCATCACTAAGGTTATTTTAAAT CCCTTGAAGATTCAGGTGTAAACTTTTTAAATAGAGTAAACTTCTTTTAA TTCACCTGGGAGATAATTCATCTGGGAATCGATTACCATAGCAACATTTG AATGTGGGGTGAGCGTAAGGTCTCAGCCAACTTTCTCCGATTCGAACCTC TATGCTCTGAATCTCTCTGTAATTCGAACTAAAGCATTGGTCCGCTCAGC TGGAAAGTCGTATAAAAACACTCTCTGTAATTCGAATCTTTTTCCAATTC GTAGAAAATTCTTGGCCCTTGAAGGTCGAAANAATTCGAATTTTTCTCCA ATTTGCAGAAAATTGTTGGTCCTATGAAGATTGATTTTAGAGAGAGTCAA CTGTATAAGTGAAGACCAGGCCCGGCGGAACAACCGTAAGAGTGGGGAGG ATGAAGGCTCAAAATGAGATAAAATTTGCTAGGAATTGAGAAAAAATCTC CTTTGCTTAAAAGTGGGGAAGCTGAAGTCTCCCCAGCCTGAAGACGAATG GGTGCACTTTCTTTTCTTCCTATAGATACGTCGAACGATATGATGAGAGT AATAACCAATGGACGCCAGTAGCCTGTATGAAGTCTAGACGACGAAGGTT TGGCCTCTGCCAGTTCAAAGGCAAACTATACGCTTTCGGTGGATTCCAAG ATAGCCTGGGTGACTTGAAAGCGTGTGAAGTTTATGATCCAGAGGCTAAT ATATGGGAGAGTATTGCGTCTATGAAAACGAATCGTTGTGATCTTGGAGT AGCTGTTTTGTCAGGTAAGCTCAATTTTCTGGCGAGTAAGCTCAAGCTTA ATTGCAAAATTTGTTAAACTTATTCTTTCAAAATACCCAGGGGGGGGGCA CGCAGTTACTACAAGACATGATGTGTAGTAAGTGCTTTTTCAACACTATT TTTCAGGACCACCACCCTTTGCAGTTACTACACCTTGGTAGTAACTGTTT TCAGAAAAGATTTCCAGGTACCACCCCTGTTTTTGAGTGATATCATCAAA AACATGCTCGAAATTACCCTAAATTGCGACTATTTTTCTACCTAAAGCCA TTTTTGCACTAGATTTTCTCTTAATTTACTTGGTTAACAGCTGTTGAGAA CATTTTAATGATAATTAGGGAAAGCATAATTTCAAAGTTGGGTCTGAGAA AAATTTCAAATTTTTTTTCGTCCATNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNCTACACTGTGTAGTAACTGTTTTCATAA CTTCTGAATACAGTACCACCACGGTAGTAAGTGTCATACTGTCTTGTAGT AACTGCGTGCCCCCCCCCCTGAAATACCCTGGATTTAACGGTCAAGATAA AAGGAACTCTTTACTTTCATTTCTGTATGGACCTCTAGATTATTGATATC AAACTAATCCATGTATTGTGTTTACTCCGATAGCTCATTTACTGCTCATA TGAAATCCGCGTATAGTCATTGTGATTTATGATCATGACCATAGAAGTCT TTCATATTTGTTGAAGTTACGTAACTTCCGCTATTATTACTTTCGATTTT CGTCAGGGATCACCTTTTACAGATCCGAACGTTTGCTTCCATAATGGTAA AAAATTACGTAACTTAACCGAACATGAAAAACCTCTAGATACAGATCTTA GAGAGTCAGAAATTTGGATTGTCCCAATTTGAATCACGGGAGGGAATTCA TAATGGTAGATTCTCGATAAAAGACCCTCTAAAAACCACCACGTCAAGTC ATAATGACTGTACACGGATTTGCATACGATCAGTAACTGAGTCCATACTG AGGGAGTAGTNCAGCCAACTTTCTCTAATTCGAACCTCTATGCTCTGAAT CTCTCTGTAATTCGAACTAAAACATTGGTCCGCTCAGCTGGAAAGTCGTA TAAAAACACTCTCCGTAATTCGAATTTTTCTCCAATTTGCAGAAAATTGT TGGTCCTATGAAGATTGATTTTAGAGAGAGTCAACTGTATAAGTGAAGAC CAGGCCCGGCGGAACAACCGTAAGAGTGGGGAGGATGAAGGCTCAAAATG AGATAAAATTTGCTAGGAATTGAGAAAAAAATCTCCTTTGCTTAAAAGTG GGAAAGCTGAAGTCTCCCCAGCCTGAAGACGAATGGGTGCACTTTCTTTT CTTCCTATAGATACGTCGAACGATATGATGAGAGTAATAACCAATGGACA CCAGTAGCCTGTATGAAGTCTAGACGACGAAGGTTTGGCCTCTGCCAGTT CAAAGGCAAACTCTACGCTTTCGGTGGATTCCAAGATAGCCTTGGTGACT TGAAAGCGTGTGAAGTTTATGATCCAGAGGCTAATATATGGGAGAGTATT GCGTCTATGAAAACGAATCGTTGTGATCTTGGAGTAGCTGTTTTGTCAGG TAAGCTCAATTTTCTGGCGAGTAAGTTCAAGCTTAATTGCAAAATATCTA AGATTTGTTAAACTTATTCTTTTAAAATACCCCTGATTTAACGGTCAAGT TAATGCCCTTAATTTTCGCGCACTACCACTGCGTGGAAATTAAAGGGTGC GCGCACTAGGTCGCGCGAAAATTAAAAGGTGCGTGAATTAGCAAATAAAT TAATAAACCCAATTAATCATGATTTTTGATAAAAATATGATATTCATAGT ACAGTGTTTAGCAGACACCATCGAGCAAACAAGATTAGTGTCCGCTAATT AAAGTGTTGTATTTACTCCGATAGTTCATTTACTGCTCATATGAAATCCG CGTATAGTCATTGGGATTTATGATCATAACCATAGAAGTCTTTCATATTT GTTGAAGTTACGTAACTTCCGCTATTATTACTTTCGATTTTCGTCAGGCA TCACCTTTTACAGATTCGAACGTTTGCTTCCATAATGGCAAAAAATTACG TAACTTAACCTAACATGAAAAACCTCTATACAGATCTTTAGATTGTCCCA ATTTGAATCACGGGAGGGAATTCATAATGGTAGATTCTCAATAAAAGACC CTCTAAAAAAACACCACGTCAAGTCACAATGACTGTACACGGATTTGCAT ACGAACAGTAACTACTGAGTCCCTACTGAGACAGTAGTTGTCTGTTTTGT TACTATTTCTTTGGCTATATCTACCCATATACCAGTACGTTGAGTTAAAC ATTTAGGTTACATCTACGTGGCGGGTGGTGTCAACTCTTACACCGGTTCC ATCAACACAGTGGAAAGATACGACCCGTCTTCAGATCAATGGACGTTGTG CCATCCTTTGTCGCAAGCCAGGGGTGGTCACTCCATGGTCAGTTATTTCG GACGGCTAATAGTCATTGGTGGAATGAACAGTTACATGCAAACGTGCCGC GATGCTGAGTGGTATAATGAGGTATTATTAGTTTTTATAAATACTTCCGT TTTCAAAATCCCCTTCTCTCTAAGTGACCTTGTGAGAGTTTACTAGGGGC TGTTAATACGGTTAGCCAATTCTTTGGTTCGTATATAAAAATAGCGTTTT TAAGCAAATAATGAATGCATAAGCAGGAAACTTCGAGTATCGAGAAGAAA TATATTAAACCGTTTCTTTAATCCTTATGTAGAAATAGTGTTTTATGTAT GGGCTCGCATTTTCTTCAAATCAGGTAACTGACCAATGGACGTCACTAGC ATACACTAACGTGCCTCGATTCGGAAGCGTGGCTGTTGTTCTTCCATTCT GTAAACAAGGTTCTGGACCCTCGCCTCCACCGGCCTCAAAAAGCCAGGAC AATGAAGAGGAATGAGAGTATGTATGGAATTTTGACAAAGAAAGGGAGTG ATGCTTTTTCTCCCTTTTTGATTTTTCACTTTAACTTTGAAGAAAAACTG CCCACATACTTTACGGCACTGGGGCATTTTTAAATGACACAGACCAAGAC TTGCCAAGACGACTACACGTTTTTTTATAAGGATATGCCTTAAAATGTTC TTAACTTGTTCTTAGTAATTTGGACATCTAAGCCTTATGTTCTCATATAG CTTGTTCTTAGAAAAAAACGTGTATAACTTTTTAGATTTAGTCGGAACAA TAAGCCACAGCCATCTTCCTGTAACACAATAATGAAGAATGCATAACATG TTCTCTTGACGCGTCTTATCTATTGACTATACAGTCAACTTTTTCTAATT CGAACTTCTATAATTCGAATCTTTCTGTAATTCGAACTAAAACATTGGTC CCCTCAGCTGGAAATTAGTTTTAAATGCTCTCTTTAATTTCTCTAATTCG AATAAAAGTCTAAATAGTCCCTTGAAGATCGAATTAGAGAGAGGCAACTG TAGATTTAGTCCTTTAGGGATCATACAAATGTTGTTTAGCGTTAACTGAT TAAGGGTTTTCATGGTAATAAAAGAAATAAACTTAATAAGGGTGTATGAT TTTATTCATTTTTGTCGGCTGAAAAAAATTAATGATTTGATATGTATTTG ATTGATAATTTATGAAAATTATTATTGACAAGGAATCATAACAATGTCAT TAATAATTTAACAAAAAATATCATTCTTTGGATTGATATGTTTTCACACA TTTCAAACTCTGTTGCAACCCGAACACTCAGGGGGTGGAAGTTACACTAC AAAAAATAACAATACAGTGGAGTCTCCATAACTCAAACACTCACGGGGAA CACAAATTTGTTCAAGTTAAGGAAATTTCGAGTTATAGAGTAAGGTTTAT AAGGCATTGTTAACTGAAGGGACCTGAAAACTTGCTCGAGTTAAGGAAAA TTTCGAGTTATAGAGGTTCGAGTTAAAGAGACTCACTGTATAAACCCTTT TTAAAGAGATTTTGAGGGGAATCTGTCTTTCAAACTCTTCAAATTGTACA TACATTTTATTATAAGTTTTTATTTATATAGTTTATTATTTGTTACTGTT GTGCACAGGAAATTATGAACATTGTGTTTTCGGCAATTTAGACAAAAATA GTTTTTTATATTAAGCAATATTATGGAAAAATTGAATTTTTATGACTCGG AGAAAGCAGCGCATGTTTTTTAATAATTCTACCTCTATATCAGGCTTGCA TTATGCTTAGCATTCTATTGTTCTTAAACAAAAGATCCAATGTTTAGGTA CCAAAAGCTGAGCCTATGTATCTACTTATAGAAAAAAACATGCAGCCCTC TGCTGTACTAAGTTGTACTGTATTTATGATTAAGGTTTTTGATTTTAAGT ATCGGAACTAGTAGGACCCGAATTTCCAGAGGCAAATTACATTCCTAACT GAAATATAACCACTGACCTTTACGAACCCTCTGAAAGTCATACCAGTTTT AAAAGTTTGTTCCAAAGATATTGTCAGTCTGTAATTTTTTGCATATTACT ATCGAAGGGGAAAAGACTTTCGGACTACTTAGGACTATTGTTTCGGCTCT AAATACAGAAAGAGTTTCATGGTTCGAAAAAGAAAGCTTGTAACCTTAGT TTATTGACACTTTTTACCGTTTATTTATGAATTTTTTTTCAGTTTTTTGA ATTTTTAGTTGCTGCTTATATATAAATATTATAGTATTGGACATTTTATA AAAAGTGAAATTTGATTTTTATTGATTGTATTTTTACTTAAAGTCGCGAA TTTAATGAAATAGCCTGTTAATATTATCGATCAGTGTAAAAAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000140XLOC_000140Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000258-exon-sc0000001-1575043694:2466690..2467092TCONS_00000258-exon-sc0000001-1575043694:2466690..2467092Clytia hemisphaericaexon
TCONS_00000258-exon-sc0000001-1575043694:2466049..2466295TCONS_00000258-exon-sc0000001-1575043694:2466049..2466295Clytia hemisphaericaexon
TCONS_00000258-exon-sc0000001-1575043694:2465873..2465991TCONS_00000258-exon-sc0000001-1575043694:2465873..2465991Clytia hemisphaericaexon
TCONS_00000258-exon-sc0000001-1575043694:2465100..2465312TCONS_00000258-exon-sc0000001-1575043694:2465100..2465312Clytia hemisphaericaexon
TCONS_00000258-exon-sc0000001-1575043694:2464257..2464474TCONS_00000258-exon-sc0000001-1575043694:2464257..2464474Clytia hemisphaericaexon
TCONS_00000258-exon-sc0000001-1575043694:2463678..2463784TCONS_00000258-exon-sc0000001-1575043694:2463678..2463784Clytia hemisphaericaexon
TCONS_00000258-exon-sc0000001-1575043694:2463014..2463089TCONS_00000258-exon-sc0000001-1575043694:2463014..2463089Clytia hemisphaericaexon
TCONS_00000258-exon-sc0000001-1575043694:2462129..2462367TCONS_00000258-exon-sc0000001-1575043694:2462129..2462367Clytia hemisphaericaexon
TCONS_00000258-exon-sc0000001-1575043694:2459022..2459236TCONS_00000258-exon-sc0000001-1575043694:2459022..2459236Clytia hemisphaericaexon
TCONS_00000258-exon-sc0000001-1575043694:2456748..2458768TCONS_00000258-exon-sc0000001-1575043694:2456748..2458768Clytia hemisphaericaexon
TCONS_00000258-exon-sc0000001-1510915933:2466690..2467092TCONS_00000258-exon-sc0000001-1510915933:2466690..2467092Clytia hemisphaericaexon
TCONS_00000258-exon-sc0000001-1510915933:2466049..2466295TCONS_00000258-exon-sc0000001-1510915933:2466049..2466295Clytia hemisphaericaexon
TCONS_00000258-exon-sc0000001-1510915933:2465873..2465991TCONS_00000258-exon-sc0000001-1510915933:2465873..2465991Clytia hemisphaericaexon
TCONS_00000258-exon-sc0000001-1510915933:2465100..2465312TCONS_00000258-exon-sc0000001-1510915933:2465100..2465312Clytia hemisphaericaexon
TCONS_00000258-exon-sc0000001-1510915933:2464257..2464474TCONS_00000258-exon-sc0000001-1510915933:2464257..2464474Clytia hemisphaericaexon
TCONS_00000258-exon-sc0000001-1510915933:2463678..2463784TCONS_00000258-exon-sc0000001-1510915933:2463678..2463784Clytia hemisphaericaexon
TCONS_00000258-exon-sc0000001-1510915933:2463014..2463089TCONS_00000258-exon-sc0000001-1510915933:2463014..2463089Clytia hemisphaericaexon
TCONS_00000258-exon-sc0000001-1510915933:2462129..2462367TCONS_00000258-exon-sc0000001-1510915933:2462129..2462367Clytia hemisphaericaexon
TCONS_00000258-exon-sc0000001-1510915933:2459022..2459236TCONS_00000258-exon-sc0000001-1510915933:2459022..2459236Clytia hemisphaericaexon
TCONS_00000258-exon-sc0000001-1510915933:2456748..2458768TCONS_00000258-exon-sc0000001-1510915933:2456748..2458768Clytia hemisphaericaexon
TCONS_00000258-exon-sc0000001-1491911889:2466690..2467092TCONS_00000258-exon-sc0000001-1491911889:2466690..2467092Clytia hemisphaericaexon
TCONS_00000258-exon-sc0000001-1491911889:2466049..2466295TCONS_00000258-exon-sc0000001-1491911889:2466049..2466295Clytia hemisphaericaexon
TCONS_00000258-exon-sc0000001-1491911889:2465873..2465991TCONS_00000258-exon-sc0000001-1491911889:2465873..2465991Clytia hemisphaericaexon
TCONS_00000258-exon-sc0000001-1491911889:2465100..2465312TCONS_00000258-exon-sc0000001-1491911889:2465100..2465312Clytia hemisphaericaexon
TCONS_00000258-exon-sc0000001-1491911889:2464257..2464474TCONS_00000258-exon-sc0000001-1491911889:2464257..2464474Clytia hemisphaericaexon
TCONS_00000258-exon-sc0000001-1491911889:2463678..2463784TCONS_00000258-exon-sc0000001-1491911889:2463678..2463784Clytia hemisphaericaexon
TCONS_00000258-exon-sc0000001-1491911889:2463014..2463089TCONS_00000258-exon-sc0000001-1491911889:2463014..2463089Clytia hemisphaericaexon
TCONS_00000258-exon-sc0000001-1491911889:2462129..2462367TCONS_00000258-exon-sc0000001-1491911889:2462129..2462367Clytia hemisphaericaexon
TCONS_00000258-exon-sc0000001-1491911889:2459022..2459236TCONS_00000258-exon-sc0000001-1491911889:2459022..2459236Clytia hemisphaericaexon
TCONS_00000258-exon-sc0000001-1491911889:2456748..2458768TCONS_00000258-exon-sc0000001-1491911889:2456748..2458768Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:2456748..2467092 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.66295 1.73915 0.995087 0.623821 13.4699 9.74617 6.55504 7.12038 5.08046 5.5424 5.55189 4.42377 6.71143 6.74723 3.69817 3.76847 4.95332 5.26528 5.24213 5.3515 5.59499 6.318 2.67622 3.48338 8.62357 8.09079 6.11662 4.58957 3.94749 3.85409
Blast
BLAST of TCONS_00000258 vs. Swiss-Prot (Human)
Match: KLH20 (Kelch-like protein 20 OS=Homo sapiens GN=KLHL20 PE=1 SV=4)

HSP 1 Score: 289.271 bits (739), Expect = 3.080e-84
Identity = 178/551 (32.30%), Postives = 275/551 (49.91%), Query Frame = 2
Query:  260 LRENDSLCDVTLISDGIEIRAHRVVLAACSEYFHAMFTSGMSETGKDEVPLKGVDTKSLTVLVNYAYTGVIFIDEVNVQTILETADLLQFQTAKSLCCDFIKEQLSTENCLDIFQFADVFHCDDVLSLSQGLFNKNWKKIVESESFSSINYHTFVKLISDDCLNIHQEGEVITMISKWIEADEINRKEKLFSLFQYVRWPYVDPIKLQEIKNQRLIVNNRLSLPEIDNVFSATEDYSD-VDKVVTLHSEDCSITPSLSMRHSYASWLYVLGGEQSFLMGMKSTEIFEMNTSTWSYGFSLNRPRTSFAAVAHGDKLYVIGGMCLGEKLRSVERYLEKEGRWKRLASLKNCKGDVKAAVIDDVVYVAGGSSGGEPACKYVERYDESNNQWTP-VACMKSRRRRFGLCQFKGKLYAFGGFQDSLGDLKACEVYDPEANIWESIASMKTNRCDLGVAVLSGYIYVAGGVNSYTGSINTVERYDPSSDQWTLCHPLSQARGGHSMVSYFGRLIVIGGMNSYMQTCRDAEWYNEVTDQWTSLAYTNVPRFG-SVAVV 1903
            LR++  LCDV L+    +I AHRV+L+ACS YF AMFT  ++E+ + EV ++ +D +++ +L+++AYT  I ++E NVQT+L  A LLQ    +  CC+F+K QL   NCL I  FAD   C ++L ++      N+++++ESE F  +  +  + +IS D LN+  E +V   +  W++     R+ +L  + Q+VR P + P         + +V    S    D +  + E+  D VD+                     A    +L  E+  + G ++                  RPR        G+ L+ +GG C G+ + SVERY  +   W+ +AS+   +  V  +V+DD++Y  GG  G       VERYD   NQW+  VA   + R   G+    G LYA GG QD +  L   E YDP+ N W  +ASM T R  + VAVL G++Y  GG +  T  +NTVERY+P  ++W    P+   R       Y   +  +GG +   +    AE YN  T+QW+ +      R G  +AVV
Sbjct:   61 LRKHRELCDVVLVVGAKKIYAHRVILSACSPYFRAMFTGELAESRQTEVVIRDIDERAMELLIDFAYTSQITVEEGNVQTLLPAACLLQLAEIQEACCEFLKRQLDPSNCLGIRAFADTHSCRELLRIADKFTQHNFQEVMESEEFMLLPANQLIDIISSDELNVRSEEQVFNAVMAWVKYSIQERRPQLPQVLQHVRLPLLSP---------KFLVGTVGS----DPLIKSDEECRDLVDE---------------------AKNYLLLPQERPLMQGPRT------------------RPRKPIRC---GEVLFAVGGWCSGDAISSVERYDPQTNEWRMVASMSKRRCGVGVSVLDDLLYAVGGHDGSS-YLNSVERYDPKTNQWSSDVAPTSTCRTSVGVAVLGGFLYAVGG-QDGVSCLNIVERYDPKENKWTRVASMSTRRLGVAVAVLGGFLYAVGGSDG-TSPLNTVERYNPQENRWHTIAPMGTRRKHLGCAVYQDMIYAVGGRDDTTELS-SAERYNPRTNQWSPVVAMTSRRSGVGLAVV 552          

HSP 2 Score: 107.842 bits (268), Expect = 8.015e-24
Identity = 65/191 (34.03%), Postives = 90/191 (47.12%), Query Frame = 2
Query: 1046 ASWLYVLGGEQSFLMGMKSTEIFEMNTSTWSYGFSLNRPRTSFAAVAHGDKLYVIGGMCLGEKLRSVERYLEKEGRWKRLASLKNCKGDVKAAVIDDVVYVAGGSSGGEPACKYVERYDESNNQWTPVACMKSRRRRFGLCQFKGKLYAFGGFQDSLGDLKACEVYDPEANIWESIASMKTNRCDLGVAVL 1618
              +LY +GG Q  +  +   E ++   + W+   S++  R   A    G  LY +GG      L +VERY  +E RW  +A +   +  +  AV  D++Y  GG           ERY+   NQW+PV  M SRR   GL    G+L A GGF D    LK  EV+DP+AN W     M   R   GV V+
Sbjct:  412 GGFLYAVGG-QDGVSCLNIVERYDPKENKWTRVASMSTRRLGVAVAVLGGFLYAVGGSDGTSPLNTVERYNPQENRWHTIAPMGTRRKHLGCAVYQDMIYAVGGRDDTT-ELSSAERYNPRTNQWSPVVAMTSRRSGVGLAVVNGQLMAVGGF-DGTTYLKTIEVFDPDANTWRLYGGMNYRRLGGGVGVI 599          
The following BLAST results are available for this feature:
BLAST of TCONS_00000258 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KLH203.080e-8432.30Kelch-like protein 20 OS=Homo sapiens GN=KLHL20 PE... [more]
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