XLOC_000115 (gene) - C. hemisphaerica

Overview
NameXLOC_000115
Unique NameXLOC_000115
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000001:1451572..1456783-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000115 ID=XLOC_000115|Name=XLOC_000115|organism=Clytia hemisphaerica|type=gene|length=5212bp|location=Sequence derived from alignment at sc0000001:1451572..1456783- (Clytia hemisphaerica)
AGGCGCTGTGGTATAGTGGTCATTGACCTTGGTTGCTGCACAGGTGACTG AGGTTTGATTCCCACTCGCAGCTGTTCACTTGGCAAGTGAATAAACCTTC GCCCGGGTCAACCCATGCCATGTGAGGAGAATTGAGTAGCCAGTCGAAAA TAGGCCTCAAAGCCTTCTGCAACTCAACCAAATAAAAAATAGAAAAATGA TATTGAGATAGTTTACACTTTCCTATTGAAGAAGAAGAAGCAATGAAAAT GTATGAAGTTCGAAACAAAAGAGCATGGTAGAAGAACTGGTGTTGTGTAT TTTTGACGATTGTAGTTTTAATGCTTGTTGACAAGTGCCAGGAAGAAGAA GGGTGAAAGAATCAGTGGATATTTCGGTAAGGTCATGAAAATTTTTATTG CAAGTAATATTAGATGGGGGGGTTTGTACTTTTACGGTGTGACGGGATTG GCTCTTTTTTAGTACAGGGAAAAAAAGACGGAAAAATGGTATTTTAGAAT CAGAGGTGACGGTATTTGGCCTTATTTTTTGTGATTATGCCGGTATTTGA ACCTGTACAAACCGGTGTGACGGTGTTATTATTTTTTTCAATTTTCGGGA TTCCGGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGACGTGTTCTTTAGAAAA AGTTATAAGATTCTTTTATTACATCTTAACGACCAACCAAATCAAATAAG AGCTTGTAAAAACTCCAGCTTGTCCCGTATTCGGACTATTATTTTTAGCT TTAAATCTTAAAAGGTTAATTAAATTAGTATTTTATATCCATTATACAAT TTACTATATGGCATGACATATTTTTGAAGCCCATCTCCTAGCAGCTAAAG GTCATGCATACCATTCAGGGATGAAATGAATGTACCGCACAAAGGCATTA TAGAAAAATATTTTTTCAAAAATTCTTTTGCGAAATCGATATAGATTGAT AAGGAAAGGTCACAAAGGTACTTTTTCTAGAGTCGTTATTTCAAATCTTG CACGGATCGAAATTTGTATAATTGGTAGAAATTCAAAATTGAAATTACCT TAAGTGAAGACATTTTCGCGGGGAAAAGAATTTGGCCGGTTCGGCGAATT TTACTAAAATTCTCCAAATTGGGTTTCCTTCGAAAGTATTTTTTTTCTGT CATCAACAAAACAAAATTCCCACTAAATTTATTTTATTTTTATGCGTAGC CCGAAATTCATACTATTTCAAGCTTTAGACAGGTTTTTTTTTGCTTAGAA ACCGCCAAAATAGTTTCCCGCCAAATTTATTCTCTTCCAGCTATCCGCTA AATTTAATTTCCACCAAAATTTCTTCCTTTGAGGTAGTTGAACTTAGAAA GTTAGTTAGTTAACAAGAAATGTGTATTTCTCAACAAGAAAAATGCATCT CATAGCCCAAAAAATGAAAATTCAACTTTTGACATCTCTTTGCATTATAG CAAGCATACGAAAAACGTCAAGATATAAATCCACCAAAGTGATCAACATG AAATACTATCAAGTTCTCACAATATGTGCCGTGTTGGTTTGTTTATTGTC GATATCAGAATCGCGAAGCATCGCCAAGCGTACGAACAACTATATCACTT ACGAGACTTGCATCAAACATGCAGATGACAATAACGAAACGTGTTACGCT GATATTCCTTGGTTTTCGAACGAATTTACCAATGATGATAAACTTGCCAT GAATGACGCATGCGTGAAAAAACACCAAGACGAACATCATTTATGTCTGA TGGAACGCCAAGAAGCTCAAAAACATGAACATGCATCATCATCATGAATA TTTTCCAACTTTTATGTATTAGTATAATGTCTTTTACACAGTAGACAAAA AAATATGAACACACATCATGAACTTATTTTAACACTTTTCTATTGGTGAT GTCTTTTTCGCATTAGGGGCCGTCCACATAGTACTTACGCACTAAGGGGG AAGGGGGGTCTTCTCAAAAGCGGGGAGGGGAGGGGTCAAAAGAAAATATA CGTACGCAGAAAAAAAAATTTCATAGCCCTTTTTTGCTTGTTTTCCTGTC GACTTTTAATACGCATCAAGGAAAAGAAATAAATTCTTAATAAACATTGA GTTTCATGTATGAAATAAAGCTCCAAACCAAACGATTTGAATTCGAAATT TTCTTCAACCAAGGAGGGGGGGGGGTTTAAATGAAAAAGTACGTACTTAC CAGGGGGTACTCAATTTTCGACATTTTAGTGCGTACGTACTATGTGGACA GCCTAGATAAAATTTGTATTTTCCTTTCCGGGAAACAGAAATATTGTCAG GTTTAATAGCAAACCTGGAAGGGTTATTGTATGTTTGAGTGATGTTAGGA TGTGGTCGTGTATTCAATAGGCTTCGAATTGAGCAATTATCAGTACACCC CTCTGTCTCAGTGCCCCGGTAGAACTTTTTCCCTCAGTGGGGATGAAAAT TTCTATCAAAATACCAATGGGGATAGAAAATCTATTGTTTCCAGCTCGAA AATTCCAGTGGGGATGGTTTTGGAGTGCAATTTTTTACATTCAGTTTTCA ATGGGGATAAAATCATAGTGCAATTTCGCAGTGGGGTTGAAATTGTAGGA TATTTTTTCCACCGGGGACGATTTTTTGTCCTATTTTTCCACTGGGGTGG GGGGTCCACCGGGTCTGTGACACAGGGGTGTATCAGTTCTCGTTTTGGAC AACTTATTGTTTCCCAACTAAAAGCCCTAGTGTTTCGTAAGTTAGTTAAT GTATGGTTTTTTTGTACCGTAGTGGTGTAGACAATCACTTTGCCTGCCAT TTTAAACCAGTCGATTTTGCGGACTAACATTGCAAATAGTTTCAAATTGT TTCAGCTTTTCTTCTCTCTTCAAAAGCTTTTAACAAACTCGCTATTTTTC TACATGTGCGAAATATTCTATTTTAAAGATTTTTCGGTGAAGATATGTTT TAGCTAGATTAATGCATCAGAAACCCATTACATGTTTTTTTTTATAAGCA TATAAGAATCCAAAAACAGGCTCAGAGATACTTAGGTCGAAAGATTAATA AGGCTGAAAGAATGCTTGAGGGATCTTATATCCGAAGCAAAAATTTAAGG AAATACTGAAAGCCGTAAAATTCCAGCCAAAAAAAGCCAAAATCAGGAAA AAACATTTTTCGTAGGCTCAAGTAATGCTTGCCATATGCTTAATTTTTCC CCATATCTGAGCCTAGATATGCTTATAAGTACAATGCTTATAAAAAAACA TGTAGCAACTTTTTAGACAGAACTAGAACTAAATTACATAAATTCTTCTG GTATAAGGTGATATAATTTACGAAAAAAATTATCTTAGTTAAGTTATTAA AACATAACATTAATATAATACGGATAGCTTACAAATATAAAAATATTACA CTTAAAATCATCTGTTCTGCCTTGGCTATATATTTCTTGCGTGTTCTTCA ATATTTTCATTTTTTCGAATAATTTTGCTCAAACTTTGTCTATCAACGCT GAAGTTTTTTCCCGTAATTTGCCAATCAATCAATTTATTTTAAATCCTCA TGCATTCTCGCATAGGGCACCAAATCAAACAATAAGGCTTTTCTTATCTT TTGTTTTGGATTTTGGAATAATCAGTGCCTATAATTTATTATAATTCCAT GCAACTAATACACATTTAGGGTTGTCCCTTTCGGCGCGAAATCCACCGGA AACTGTTAAGTATCCCTCTTCCAATAAACCAATAAACGATCCTGTTTCAT ATCACGTGGTAACGATCCTTGTCTTCTGATTGGCTATCACCATTAAACTT CCAATAAACCAATCAAACGATCCTCTTTCATATCACGTGGTAATGATCCT TGTCTTCTGATTGGCTATCACCATTAACCAATCCATTATCTTTGTTTGAA ATAGACAATAGATTTTCGTTCGATTTGTATTTCTTGATAATTGCTTTCGC TTTGTCAAAATCTGTATCAAGATTTTTGAGAGCGGCGGACCTTTTCGATT GACGTTCTTTGGCTTCTGCTAAACGACGTTCTAAATATGGACTTGACGTT CGCAATGTCTAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000211TCONS_00000211Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000211-proteinTCONS_00000211-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:1451572..1456783 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.43 0.35 0.58 0.9 0.17 0.25 67.3 73.97 168.93 101.52 162.02 207.88 0.2 0.27 0.13 0.19 0.66 1.29 0.4 0.12 2.53 2.06 0.09 0.19 0.16 0.22 0.23 0.2 0.14 0.15