XLOC_000105 (gene) - C. hemisphaerica

Overview
NameXLOC_000105
Unique NameXLOC_000105
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000001:816700..827225-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000105 ID=XLOC_000105|Name=XLOC_000105|organism=Clytia hemisphaerica|type=gene|length=10526bp|location=Sequence derived from alignment at sc0000001:816700..827225- (Clytia hemisphaerica)
CGGGTAGCTCAGTCGGTAGAGCATTCGCTTGAATGCTCGGTTGTGGGTTC GATTCCCGGTCACCGCCAACTCAGCGGATGAGTAGCTTAGATTGGGCAAT CTGATCTAAGCGGTAAGTTACTGGGAGCTGAAAGTAGGTATGACGCTCCA CCTCAGCATTCGATCTCTCAGGTCTAGCGCAAATAGAAAAGGGGATAGAC TCCCTCACTCCCGGCTCCGCCGACAGCCACCAGATAAATATACTTACTTA CAAGATATTAAAAACATTTTAACGCTAAATTGTTTAGCAAAATGGACAAA ATACTCAAAAAATGTTTTATAATGATTTATTCTGATATCTGTTTCAGGGT TAGAAAAAAATCAAAACAATGAAAAGACCATGGTACACAATGTCTAACCC TTTAGAGCAGTAACGTGACGTAATGGTGAGACTGTGACGTCACACCAATA TAATCAGTCAGGCATGAATAAGGATGACTGGAGGTATGGGGAAGAATCAT AATTTCATCAAGCTCTGAAATAAACAATTTCATAGAAACAGTTCGCTCTC TCTAATTCGAGCTTCTTTTATTCGAATAATTCTGTAATTCGATCTAGATG GTCGGTTCTACCTAGAGAATGGTATAAAATACTCTCTGTAATTCGAATCT TTCTCTAATTCGAAGAAGATTCTTCGCCACTTGGAAATCGAATAAGAGAC TGTAGACTGTATTTTAAATAATATTTGGTGAAAAAATTTGGCTTGGTAAA ATTTGACAACGATGTCAACGTCACCTAGTTCTGGTCGCATTAGGCTCTTC CAAAAAAAAATTTGAATATGGGAGGTGGAGGATATAACATTTTTTGGTAA TCTATTCCCCGGATATTGTGAATTTTGACCCCCGGACAACGGATCTCACC CCCGGACAAACATCAGTTGACATTCAGAATCTAATGGAGCAAGTTTGCCC CAAAAACGAGGCAAATTTTGCAAATTTTTCACTACTTAAAACCCACAATA AAAAGTGGTACCCTCTATCTCATTGTTTAGTTGGAGTGTAAGGCTGAAAC TTTTTGTGTTGAAAGTACGTTGTCTATGATTGTCNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACAAAAAAGT TCTTTTGACCTCAAATTTTGAACAGTGATTCACTGTAAAGTTACTAATGT TATGAATATACCATTAGTACCTAAATGATCTCAAAAATATGTGTTCAAAT CAAAATACCCCTTAAAACCTACAAAAATAAGGCTAAAAACCACAAAGTCC GACCCTTGCTAACGGGATACTTAAGCTGATGGATACAAATTTGGTGTTGC TTCGTGATTCAATGGTTCAAAGACTCGCTAGAAATTCATTCCCACAACAA TATTTTCAGGATTTCATGCCCATAATGCAATTGTGTGTGGTTTTTTCGTC AAAAACGGCTACGAAAGGCCAAAACCTTCATTCGCTTCATTTTTGTCCTA TGGTTCTAATGTTTTTCTAAATCTCCATCAAATTTGTGACATTTTGGTAT GCAACATGACCAGGTTTTGAGAAAGTCGAATTTCAGATTTTATTGATCAT CACCATAAAAGTGCTTTAAAGTAGAATTTTAAGGGCCTGTCATTTTCGTT GGGGTCTATTCACGAAGATGAAAATGATTTTTTCATACCTACCATAAGTA TAGGTATCTAAAAAGTATAGGTTTTATGACCTTAAATTCAATTGTGTAAT TTCTAGGTCCAAAAAACTTGATTTTTTGAAGGGATTTTTGATAGAATTTT AAATAACTTCGAATTTTAAGATACTTTAGCATGTTTAAATTTTTAAAATT TGGTATTTTATGAAAGAACATTTATAAGAGGTTGTAAAAAAGTGAAACAT ACCACATAAAATTAAATCTGGTAGTTATGAAAGCCAAAAATGCAACATTG TGGGTTTTAAGAGGTATGTGGTTTTAAGGGGTATCCACTGGTAACTTTTA AACAATAAATTTTAACATCAAATTTTTGTGTTAACAGCGTTTTGGTTTTG ATAATTTTCAGGAAAAAATAAACGATCCTTGGTTGTCTCAGCTACCGAAA TTTCTTTTGTGTGGGTCTAATTTTTAATAAAAATTTACATTGCTAAAAAC GCTGGATCTAATTTAACATTTTTTTGTTTGTTTTTAGGTATTCAGTACCA CGAAACAAAATATTCAGCAATCAGTAATAAAATTGAAGGTAAGCTCAAAT TTTCACCTGTCCTTAATATGTTTTTCTTTGTTGGGGGCGGTTTGGCGGGC GGTTCTCTTTTATCATATTTTCGTTTCACTCGACTGTTCTTCATCTTTTA GCACTTTTAGTCTCAGATTGTTCTTATCCCACTCTTGCACAAAAATAGAG AAAAAGTACTGTAGTGCAAAAAAGAACATTTTTGGATGTTCTTGTAAAAA CGTATAATTTGGGGTTCAGATTAACTCAAGATTTTTTCACATTTTTAAAG GAAAGTTAATTGGAAGATAATTAAGTAAATATTGAATAATTGAGATAATT TTAGCAATTAAATGCCGTGTTAAATAAAAAGTAGTTATCAATTATCAAAG AAGGAAACCGCAAAATAGAACAAGTGTCAGAGACAATTATCTCACAATCC AGCTGCCTGGAATTTCAATGAAAGAAAACACCATAGTTTGCGTTGAAAAT GTTGTAATTTTTGTACGAACAAGCGAGGCTCAGCCTTGATTGCCCAAACA AAAAAAAAAAAGTTTTATACTGAAACTTTCTGGGCATTCGAGGCATCTGT TTACAAAACACCAAAGTGTGTAAAATAGACTCATTTGTAAACTTTCCCCC CTGATTTTCATACAGAAAACTATATTTCCAGGGGGTTTGGCTACTGCTAA TGGCATGTTTATATGAGGCAATGCGTAATAAGGGTTTTTCGGAATTGATT TTTTCATATTTTTGTGAACCATTCATTTTTCTTTATGTGGAACTTTTAGA GTTTGTGCATGTGAGAGTTGTAGAAATTTGTTTGGCGAAAATTTTAAATT TTTCTTAAAAATGGTCTATAGTTTGCGATCGAGAACTGATGAAACAACTT TCGAGCAACAAAATATTACGACAAATAACGATGCTTATAATATTTATAAC GACTGTAGTTACGAGAATGAAAATTACGACAACGAGAGTGAAATTTACGA TGACAATAACAATAATCGGTGTGAATCTCCAACTTACGAGAATGGATACA TGTTCCGTAAACAACCATTAACGACAACTTACGACAATTTTACGACCAAT CTACCAACTGGTATTATTAAACCGATCCCTGTCACTCGTAAGCCCGAAAT CGAAACGAGTATCGAGAAACCGACGACAAGATTTCGAGCAAGGATTCACA GTGTCGATGATATACTTGATCTATCACCGAAACTTAAAACACCGACAGAT TCGGTAACTTTCGTTTTCAATAACGGTCAGTCTAACACCGTCTTTAAGGA GAAAACTCGCAACCGTAAAAAAGTCGTAACTCGAGTTCCACGTGTGACAC GACGACAAACGACGACAGCTTTTGTTAAGCCACGACAATCGAAACGAATT TCTCCCAACAAAGACGATGAAGGTAAATGACTAAATTCGTTTTTTTATAA GAACAAACTATATAAGAACATTAATTCTCGATGGCTGATATCAAGAATCA AAAAAATCAAAAAATTTTCTTCTAAGCAATGAAGGCCTATACTAATATTA GCCCTGTTTAAGATTTGGTGAAAAGATTAATCTCATTTTTACATACAATA CACTGGTTTAGCTTTAATTGACATCTGATCGATGTTGAGCATGAAACGGT TCTAATCTAATCAACATTTTTGAGATTTTGAGAGGATGTTTCTTATTGTG AAGATTGAAAATAAGTTATACTTTTTTGATTAATTTTGTAATAAACTTTG CTGAGTGATGGGCTAGAGAGCATGAGCTCTAAGCATGAGGCCCTCAGCAG TTGGCATGATGGCGTTCTGTGATTTCAAAAAGCATGACACGTGATTGAGT ATAAGAATTATTTTGTTTTGGATGATGGAGAAAAATTTCGGTGTGATCGT CTGGTTGTCGTGATGACGTGATCATAGCTTGTGTCTGACTTTTTTAGGCC TAAAATAAGCACTCTCATAAATCAGTCAAACTCTCCCTCTTCAAACAAAT AATTTACGTTCTTTGTGTTCCAGTTACTTGAAGAGGTTTTTCAGGGTTTT TCCAACGTTTGAAATTAAAGAGGCGATACCTTCGAAAGTTTACTTCCATT ATGGCGTAAGTTACGTAACTTAGTCAACTAGAAAGACATCTTTACTTCAT CTTTATTTTGAGTATATTAAACAAATTCTGAGTACGGAGAAGCCTGGGTC CTAGTCAGAAAATCTGCCGTATACTATCTTCGCTTTCTGGTGTGAATGAT GGCACTACTTCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCTTTCCCCCCCCC CCATCAGAATTTTTAAAGGCAAAAAGTAGTTGAACTCTAGCTTCTGGACT ACCTCGGTTCTGGTTTTCTTAGTGAAAAAAACCTGCACACAAATTTAAAA GAAATCGTATGAATGACTTACCTTGCTGATTTAATCTATGAATTTGTGTT GTCGGTTCGACATTCTGTGTTCCTCGTTGTCGATTCCCTGTAAAGAAAAA CAAAATAATTAGAGTCGAATCTTTATACCTTATCGGCCCTATTTACGCCG GCCCTTATTGGCGTTATTTTTTGGCACGTGGCGTAATAAGAGCTGGCGTA AAAAGGGCCAAGATTTTTCAATTTTTAGCTAAAAGTGGCGTTAATCTTCG ATCATCATTTTTCAACTTAAAGGATTTTAGGTATGATTCGAAGACAAAAA TTATCCATTGTTTTACTCCATATCTAAACCAGTGATTTTGAATGGAATTT TCAATAATTTACTACCGAAACATGATATTTCAATATAAATTTTAAACATT ATTCAGCATTATTTACTAATTTGAAGCATTAGTAGCCATTTTTACAAATT TTGGCGTTATTAACGGTCCTGATTGGCGTAAGGCCAAAATTGGCCTCTGG CGGAATAAGGGCCGACGTAAAAGGGGCCGGCGTTAAGTTAGGGCCGACGT AAAAATGGCCGATAAGGTAACTCCAACACGTACGGAAAACTCTTAATTTG TTTAAGTTATAGAAATTTCGAGTTAGGGAGTAAGTTTTATAAGGTATTGT TAATTGAAGGGACAAGAAAAATTGAGATGAGTAAATCAAATGGGATGTCT GATTTGTTATTGAGCTTCTTTTAATTTTCCACATTGTACTACGCGTTTGA CCTTTAGATTAAACAAAAATGTACGTCTAGTAGAGAGTGAGTTTCTTAGC CACATGCTTACTGGGCCAGCGAATTTCAAAATACCTTTTTCGTAGTAAAA GTATTCCAGAAGAAATTGACTCCTTAAAAAACTGCATTTTAAAAAGGTCG TCCCGTTAATCACTATTGAAGTATCTCAATGATTNACTGCATTTTAAAAA GGTCAACTCCGTTAATCACTATTGAAGTATTTCAAATGATGTTTTGTTTA TCTTTTTAGACCCTGGAGGTGTCAACCAGCTCGGCGGCGTATTTGTCAAT GGCCGCCCATTACCCGATTATATGCGCCATCGCATTATCGAACTCGCACA ATGTGGTGTCCGCCCTTCCGAGATTTCACGCCAACTACTTGTTTCCCACG GATGTGTCAGTAAAATATTGGGGCGATATTATGAAACCGGATCTGTCCGC CCGGGTGCGATTGGCGGCAGTAAACCGAAAGTCGCAACGCCTAAAGTTGT TCATCGAATTGTTAAACTTAAAGAAGAGAACCCGTGCATGTTTGCGTGGG AAATAAGGAACTCATTATTAGCGGAAGGTATATGTGACAACGGGAACGTG CCTTCCGTGAGTTCTATAAATAGAATATTACGTAATCACGCAGCCGAAAA AGAGACTAAGGAAGCAAAAATGAAACAAGAAGAGCTTCAAAAACAAAACG GTTTCGGAATGCTTAATAATTTCAATTTCGGTAATTTCGCTACCGCACCT TTTAATGGACTTAATACGATAACGGGGACTCAAGACGCCGCTACAAATGC GGCCGCGGCTAACGCCGCTTATAGCCAGTTTCCGTTTTTTAATACGTCAT TTCCGATTCTAACGGGCCCTCTTCAACAGCAAACTACCGCACAACAGTTA TTGTCTTTACCGTTAAATCAAATGTCGCCGGAACGCAAATTTAAGACGCC GACAAATGACGGAGTGTCGTATCAAACAATAGACGACACAACCGGGAATC CCTTCCACGACCATTTACAAGGTTCCGTTGTTACGTCAGCTGCCATAAGC GATTACGCACAAGTTCTGAGTGAAGAGTCACTACGGTCGACCGGGGAACC GGACCTACATACCGGACACGCCCAACATCAACAACAACATCAAGTGAAGG ATATATCACCGAACTCTTCAGTGTTAGTTGATGACCATCATCATCACAGG AATGACCTATTGTTATCCAAAGGTAATTCACAAATGAGTTTTAAATCTGT TTTAATTCGCACGTGTTATATGCACCAAAAATCATGTAAACAAAGTTTCT ACATTATCGTCAACATGAAAAGTATGGGCAATCTGACTGGGTCAAAACGC GTACCATACATAAATGCTGTTTTTCATATTGTACCGTACAAATACAAGAC TGTGTTCAAAAAAGGGGTCTGGTAAGCGAGAGATTGTATTTTGCACAATT CTATGGTTAGAAATGTTTTCTTTTCACTTGCCGAATTCTAACGGTTCAGA GTTCCGAGTTCGTACATAAATCGCTAAATTAAAGCACTTAAGATTAATTT CCAGTTTTAAGATCTTGAAGAAACATTATAATAGTAAAGTCTGTCTCAAT ATAAATTGCAGCGGAGACAAAAAAGACTATAACTTTTGATAGAATTCGAA TTTTAGATAGCAGTTTTTTCGCTTGTTGAAAAGACAAACAGGAGTGGAAT ATTATCATGAAGAAAAAACTTAAAAAATATCGGAAAATGAAGATTGAAAA TTAAGAAGAAGAAAATCAACTTCTTCAATAATCGTCCTATAATTATCATT TTTACATCAAAGAGATTTGTTCCATCGAAAGATACAGTTCAAAATTTATC ACTGATTGACTTCAAAAACCATCAAAAACAACAAAAAAGAGCCCTTTTCA AGTTAACCAGGGCAAAGTTTTAAGCTTTATTTTTTGACTGAATGAAAGTT TAATGAATTTTTCTTTCGCATTTATGACGTTCTAAGATTAAAGAATTTCT GATATAAAAATTAAGATCATAGCATTGTTTTACGAGAAGCTGAGTTCTTC TTCATTTTTCATCTTCGTTTTTCGATCTTTTAATTTATTTATCATATTCG AATTCTATCAAAAGTTATAGCCTTTTTTGTCTCCGCTGCAGGTTATATTG GGACAGACTAATAATATAGAGACAGACAGAATAATATCGTATCAAATTAT AAGAAATCTTTTAACTTTCGTGAAATATCATTCAATCATCTGCCTCTTTA ATTTCAGAAGACCATACGAAACTTATCCAACACTTAGAGCAGGGAAGTAA TCAACTCGGAGCAGCTAACCACCAAGATGGACCCTCCAATCTCACTCATG TCGACCCTACCGGCCTCTNCTTATCCAACACTTAGAGCAGGCAAGTAACC AACTCGGAGCAGCTAACCACCAAGATGGACCCTCCAATCTCACCCATGTC GACCCTACCGGCCTCGTAGCGCCGCATCAACATCAACAACAAACACACAG AAAGAAAAGATCGTTAGAAATATCACCGACAAAGTCAGACTCCAGTAAAG AGGAGAATAATAATTTGAAGCCAGGAAATTCTTTGATGAGTGAACAAATG AGTCCTGATATGAAAAGACGACGATTTGCAAGTGAAAGTCCTGTTTCATC TGACGTAAGTGTGATATTAAATTTTATTGCTTTTGAAAGTAATTCCTGAT AGACTCTTTTCATAAATTACGTCACGAACATCACTTGCCTTGTTTTGAAA TTATTGCCATGCATAGCAGGCCATATTTTAGAAAGGCAAGGCAGCTTTCG TTGGTGGCCAAAAAGGGCACTTTTTCTTATGTTTTTCCACTAAAAAGGCT GTTTTTATCAAAATTTTAGTAATTTCAAGAGGGACAGCGTCCGATAGCCG GACGCTTAAAGGGCATGAAAGATGGCCTGCATAGTGATTAACTCCCAGCA GATTTTATTACGAGTTTGGTCAGAAAGGGAAACAATTTTTTGTTAGGAAA CAATAGTGAGACACTGTCCTGGTATGAAATAAAGTATGTGTCTGATATGA AACGGGAACATTATGTAAAAATAAAACCTTTAAAGTGGTCAACGAACCCA CGACACTTTCTTTTACTCTCAGTCAGTTTAGTTATCGACAATCTACCTAG AAAAGTCTGAGAAATCTTTCTTCAAAAGCACCCATGTTTTTATTTTGAAA TTCGTAAAATCCTTTTAAAACTTTTTTCTTTACTCTAGATGTTGACACAG AAGATTTCACCCACATGGTATAAATATGGCGCAATGTTCCCTGGCAACGG TAACCTAGTCAACGTAAACAACATGAACGCACTTAATCAAATCAACAATT CACTCGGTGCCNTGGCAACGGTAACCTAGTCAACGTAAACAACATGAACG CACTTAATCAAATCAACAATTCACTTGGTGCCTTCAATAATCTTGGACAA TTTTCAAATAATGTTAACGGGATTAACGGATTAACGACTCTAAACGCATA TGCTAACAACGTAGCCGCCCTTAACGCCATGACGTCGATGGCGGTGAACG GGAATACGCTAAATGGGTTGAATTTACAGAACTTGAATAATCAAGGCGTG ACCGGTTTTACGCCCACCTTTGATGGCGAACGGTCGCTTGGTAATAGTTT GAATAATATATCGAATAATGATTTCGGTGGATGGCCGAATAATTTTGTCG GGATTTTATCGGATTCGCCGTCGTCTTATCAACAAAATGGCGGCAATATT GGGTCTGGGAATAATTCAAATCAAATCAATCCCTCGTTTGGATTGAATAT GTCCTTCACGCCCACGTCGAAAAATTTAATACAAGGACTTACGAATTCTA CGTCGCCGACAAGTGCTTTGTCGAATTTGTTACCAGGGCAACAAAACTTT TTTATACAAAACAGTCCGCAAATGAGTGGAACGGGAAATGGTAGCGGAGT AGCGAATGTAAATCAAAATGGTGGTGGCGGTTACCAACAACAACAAACGC AACAACAAGATGTTTTAAGTTTAAAAATGATGTCATCGCCAAGTTTGCTT ATGCGAAATACGAATGTTAATGTCGGCAACTAAAAACCGAGAAACGACGG GTGTTTCTCTTGAATTATAATAAGAGTTGACCCTTTTTAGACTGCGATTT ACGTTTTGTGTATTTTTATACAAGATTGTGTTATGCTTTCGCGTAAAAGA AAGCTTGTGTGAAGTTTTTTTCGTTTGTTTATGTACTTCAATGTAAACAA TTTTGAATCTTCGTTTTTTTTACCGAGTGACCATTGTTGTGTGTTAAAGT CCATTTTTGTTTGTCTAAAGGCTGGTCTCCGCTTGTGCGTCTTCCACGCT ATTGGTCAAAGGAAAAATGAAACAATTCCATTGGCGCGATCTGACGTAAC GTTCCAAAAAAGTTGAAATGTAGTCAACTTTCTTTTCAAGCGCGCACTAC ATTTTTATGACGTAATCTTTTTTACAAGCAAAATTGATTGAAGCCAAAAG GTACAATCGCAGCGCGCGCAAGCAGAGACCGCCTTAAGGGATTCGTAATC GTATAGTGTCGGAAAACTACTAGATGGTTTTTAATGTTGTGATAAATTGT GTTTTGCGGTATCTGTATTGTTGAGCATGACTGACATTAGAAACATAGAA AGAATATAAATTCTATATTTTTGTACATTTTTGAAGACTTTTATCAAAAT ATTAGTAAAAATATATACACCAGTTTTACTTTCATAACATTTATATACAG CATAAGAGAAAATTTCTTGAACTTAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000178TCONS_00000178Clytia hemisphaericatranscript
TCONS_00000177TCONS_00000177Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000178-proteinTCONS_00000178-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:816700..827225 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.1 0.1 0.35 0.54 12.85 12.87 29.58 31.99 6.79 5.25 19.94 14.81 19.43 15.96 15.37 37.67 19.89 20.11 0.23 0.16 9.37 10.89 5.15 6.18 9.18 11.29 1.76 0.58 0.05 0.04