Error message

Warning: shell_exec(): Cannot execute a blank command in include() (line 59 of /var/www/marimba/sites/default/modules/tripal_cvterm/theme/templates/tripal_feature_cvterm.tpl.php).

XLOC_000088 (gene) - C. hemisphaerica

Overview
NameXLOC_000088
Unique NameXLOC_000088
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000001:346302..354514-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000088 ID=XLOC_000088|Name=XLOC_000088|organism=Clytia hemisphaerica|type=gene|length=8213bp|location=Sequence derived from alignment at sc0000001:346302..354514- (Clytia hemisphaerica)
GTATTTTGATTACCTCTTTTCCTCCCTGTAAAATATTGAAATTAATGAAT TGATTGAATATCTCTGTAATTTTGTGTAAATAAGCTTTTCAGGGATTTTC AAAATATTTTTGCACACGGATCATGAGAAAATTACACCAATGAGCTTTTG TTTTGAACACGAGTGCAAAATCTTGACTATTCTCTTGTTCCTTCCTCATT TACTGCAAGTCTAGGTCTTGTAAACAACATACATCGACACACCTCCAAGA AGCAAAATGTCTGACACAACTGGAAAGGTAAAGTCTTTTTCATTTAATCT TCTTATTATGAATCTTTTTGTTCATTATACCTCCATCCTGTGTTATTCCT TCCACTACACTGTGAAGTTTTTGGACAAGTAATTTCATTTATAAAACAAG GTTACAAGTCTGAGAACTATTGATCCAAGCATTTAATTAGTATCGACTGG TAAAGATTAGGCTTCCATAGTATTCCAAAATGCAAAAAAATAGCACTATT CTAAAGGAATCAGAGTTAAGTTTGGAATACTTGACAAATTGGGATAAAAG TAGACAGTTTTTTTCATTAAACAAGTCGTAACAAGTCTGCCTAGATAATA TATTGTGTTTAAAAAAAATTACCTTTTTTACACTGTACTTTATGTCTGTT ACCGGGAAGGGGTAGGTATCAAAATTTAGCAATCCAAGTCTACAAAAGTC CACTGCGTTATGCCACCTCAGACTTTTCTGTAGACCAATTCAACAATACA ATACTGAAATTGAATGATGCAAAATTTGAATTGCTACGTTATGGCTCAAA TACAGAAATCAAAAATGAATCTCACTATACCTCACCATCAGGAGATAAAA TTTAAGGAAAGGAATATGTTAAAGACCTGGCACTCATTTTCTACACTACT TCAAACTTCTTTGCTGCAGATTAAATTGAAACAGGCTTTACTATTGATAC TAGCTTATACTAGATGTCACCCGCGTTTTTTCTACGCAATTAAGGAATTA ACGTCTATTCCACTTTGTGACATTTTCGAATGTTTGCCCAGGTTTTTCAG GTTTTGGATTTTTTGAGGTCCCATCTAATTTTTGAAGCTCCTGCAGAAGT GAAAAAATTGAATTAACGTCAAAGCAAGCTTCTATTTTTCCAAAATCTTC AAAGTGGAACTCACTAAGAAACATAATGAAATATCCTGTTTTTTGGTGAG GTGCTCGCTATGTTGATACAGTTTCTATTTCTATTTGGTTGAGTCACAGG AGGCTTGGTCAATGACCAATACCACAGCGCCTCAGTTACGGTCAGTTGTC AAGAAAGTTCTCTGAAACAATCAAATAAAAATATTTATGCTGCGAATGAA AATATCCTTATTATTTGAGAGACGAACCAACCTGGCTGCCTAAAAAAATC GTAAAGTTATCTCGCGAACATAGCACCAGTTTGTGAGAAATTCATTTGAC TACATGTATCAGCATGTATTTTGATTTATTTTTGATTCAATACACTACCG TAGAATCGTCTAATATCGACACGCGTCTTCTAAAGTCGACACCGGATCTG TAAAATAATCAAAACAAACCTTGAATGAAATTCTTGGTATCATTCTTATC AAACAAGTTCATCCATCAAACTAGAAGAAGTCCAATAAACATTGCAATCC TTTCAATTAAAAAAACAGCCAAATTATAAGCAGTTTTACACAGCACACGA AGCGCATGCAAACTTCCTCGTAACTTTCTCGTGTCCATCATTAAAATTTT ACAACTTTATTACGCTTCAAGTCACGTGATAAAAATAATTTGCGCGCTTA GCCTGGTTTCCCCTTCCTTATTTATCAAAAACACACGCTTTAGGCGCTAA GAGGCTGCACGCCGTGATGGCCAGTATGGCGGTCACATTAAATTCAAAAG GAAACCAGGTTCTTTTTATTTTTTTCGGTTAACGGTAAAAAGGTCTACTA AAAAATTCCTTGCGTGCAAAATGTTGTTTTGATTTATTTGGATATCTTCG TTCCGTTGAATGACAATGAAAGCATGCTAATTACAAATTAGTTTTTAGTG ACTATATACATATCGTTAAAGTTCTTTTCGAAAAAAAACCACTTCACGTT TCTTACATTTCAACAATCTGTGACGTGATAGGGAGAGTACAATTTAGTGA TTGATTGATAACTTTGGTATGTATTTGTTTATGTTTGATTTTTTATTTCG AAGACCAGCCTATAGCTATGTCGAAATAACAAGACGCATGTCGATATTAA ACGACTCTACGGTATTGCATATGTTTTTTCTACATTTTTTTTACATTCTA GGTTATTAAATGCAGAGCTACTGTAGCATGGGGTGCAAAAGAACCTCTAA AGATGGAAACCATCGAAGTTGACCCACCAAAAGCTGGTGAAGTACGTATG AAAGTTTTACACACTGGTGTTTGCCATACAGATGCTTATACATTAAGCGG TGCTGATCCAGAAGGGGCTTTCCCAGTTGTACTTGGACATGAAGGAGGTG GTATTGTAGAAAGTATCGGAGAAGGAGTCACATCAGTAAAACCAGGTATG AATGATGTTATAAGATTTATGGGTGATATGCTGGGGTGATTGTGTTGGGA AAGTTTTTAAATCCTGTCTCAAATTTGTGTTCATTTTGAAGCTTTGAAGT TTGGTATTTTGAAGAAGAGTGAAAAATGAACTAAATCGATTCGTTATTAT TAAGAATCACCCTAGGAATATTGAATGAAATACTGTTTGGAAATCACTAG ATATATATTTGAAGATTTAAATAAAATTGCTATTGACTTGAACTCTTTAT ATATTGAAGGTTTGGTGTATTATATTTATTCTTGATAAATAGAATAGTCA AATTTCATCTGATTGTAAAACACTTCAGATTTTTTTATCAAAAGATCTGT GTGCAAAATTGAGTTCAAATTACACTCGACATTGTGCAATGAAACAACTT TGATAAACATTAAAATTGAATCATCATTTCTCATAATATGCCTCTAATTG TTGCTTAAATTAATCCTGTTAAGGTTCTTATCTAGCATTATCATTTGAAA TCAGGCATTTTTCATAGACAATTTAATTGTCTACATTAATTAAATATTAA AAACAAAATAATTTATGTCACTGTTAAAATTGAAAATTCTAATTTCCCCT TGCAACTGATAAGGCTAACATCTAGGTAATAGTCAAATTTATAAAGATTG AGGTTTCTTTAGATATGCAAAATGATAAGGCTCAGATAAAGAGTTTCTTT AAATACCATTATCAGCTAAATTTTTTAAACAAATATGCGCTCTGAAAAGT TTCCACTAATTAAATAATTTTTGTTTACCTTTTTCAGGGGACCATGTCAT TCCATTATACATTCCGCAATGTTACAATTGTAAATTCTGTTTCTCCAACA AGACAAACCTCTGCAGTAAAGTAAGGTGAGTGCCTTTACATGAACAATGT CTTTCTCAGGGGCCTGAGTTCTACTTTAAAAGAGCCTTGTATCGACCAAC ACCAAAATCAGCAGAAGAAATTGCCTTAAATTTTAGAGTACACAAAGCAG GCTCTTCAAGGTACCGGGTGTGCCACAAATAAGTTACCCTCTTTGAATTT ATATTGCAGGCAGTAGAAAAGAGATTTTTCAAATATTGTTTCGGAATCAT TCAGAGGAAAGCCTAACTTAAAATTTGGTTTATTACTTTTTAATTTTTCT TTTTCTTTCGCCTTTTTCTGTCATTTTTTAAAATTGATACTGAGGTTTTT GAACATAACCTTTGAACTAATGAAGCAAAATTAAAAGTAATACACCAAAT TTTAAGTTAGGCTTTCCTCTGAATGATTCCAAAACAATCTTTGAAAAATC TCTTTTCTACTGCCTCCACTATAAATCCAAAGAGGGTAACTTATTTGTGG TACACCGGTATGAAAGAAACTCGAAGCATTTACTTTTTCTTGGAAGCTTT AATAAAATACCAATTTTAAGTCATTAAAATGGCTTTTATATTATTGGGAA GGAAACTGATTTGCTGTTTACCTGAATTTGCTGAGTCGTCACTAAATGGT TTTGATATTTTTTAATTTAGAGCAACACAAGGAAAAGGCCTTATGCCAGA TGGTACAGTTAGATTTCATTGTAATGGCAAAGATTTATTCCATTTCATGG GTTGCAGTACATTTACAGAATACACAGTGGTAGCAGAAATTTCTATCGCT AAGGTATATTGTGAATTTTATAGTAGTTCTTGGGTAATATGGGGACATAA AAAACATGTTAGATTCTAAGGATGGCGATAAACCATCGTTGAGCAAAATT GCACTTCTAACATAACTTTTGTTACCACTTTTAAGCTTAATTCTGTACGC TAGTGGTTTTGCTCTTTGAAACAGCCTCTTATAGAGATGAGCAATCTCTT ACTAACATATTCATTACAAACAAAGCTTTTCATCTACTTTTGTAAATAAT TTTTCAGGTCGATGAGAAAGCACCATTAGATAAAGTTTGTTTACTCGGAT GTGGTATCACCACTGGTTATGGCGCCGCTCTTAACACTGCTAAGGTATTA TACTGAGATTTGTTGTGGATTGTAGCACCTATTGAACTTAATTCCATCAA CTTTTTAGGTTCCACGTTAATATTGTGTCTTTATTTACAAGTACTCACTG ACAAACCCGATCCTTTTTCATTTGACTGCGTGAAAAGGGTTAATAATTAA TGTACCGTTTTCGTAGGATATCACTTTAGGTTTTCAATCGCAGTGTGTGA AATTTTGAAGAATAAAGCAAAGTTACTCATTAAGAATATTGATCCTTGCA AAAGCAAAAACCGATATTTAGAAGTTCTATTTTCTGAGTGCACTAACACA GAAAAGTCTGCAAAAATACACATTCTTTCTTCAATAGAAGTACGTTACGA TATTCCAAATCATAATTCGGGGATCTTAATTTTGTGGATAAACTCGTAGA TTTGAAAAACCATTTTAACCAACCAAATTTTATTAAACATGAAATTTCGA GAAATCTGTTAACTGTACGCAGTTGTACGTAGTACATAAAACTTCTGCAA TTAGTAAAAATATATCATACTAAAGTTTGAAAAAATCAATTTTTAACTCA CTTAATCCAACTTACTTTAATACTACCATAGTCATTATAAAAAACCCCAG TCTGGCAATGTATTGTTTTAGCTTTTTGTTCAATTTAGTTGCTATTTGCA TAATTTGTGATCACGTTACCAAAATCTCCTATTGGGATTGGTCTATTTTC TAATCACATGATCAAAAAGTTTGCAAATAAATCGATTTTGTTCACGTAAG CACCATCTTTTAACAATGAAAAGAGACAAAAGCCTTCCAGACCAGTGCTT TTATAATGACTATAATTCTACCATAGGTTGAGAAAGGCTCCAATGTTGCA GTATGGGGTATGGGAGCTGTTGGATTAGCTGTCCTAATGGGTTGTAAAAA AGCTGGAGCTGAACGTATCATTGCTGTTGATATCAACCCAACGAAAGAAA AAATTGCACGAGAATTTGGTGCCACTGAATTTTTCAACCCTAAAGACCAT GACAGGCCAACTCAACAGGTACACTTTCGATATTTACTTTTGAGGATAGG ATTATATTACCTGTGAAATAAGAATTTCTAACTTAATTCTCTCAGAAGAT TTGGGTGGTAGAGTAGCAGTTACATGTCTGGAAAGCTCTGAAAATTTCAC GTCAGATTTATAACAAAAAAAGATCTTTGATAAAAATTCGAAACGAAGGG TCTACATACCTTAAGGAATTTTCGAGTTATAAAGTAAAGTTTATAAGGGT TATATATACAACTAAAAGGACCATAAAACTTGTTCCAATCAACGAGACAT TCTTTCGAGTAATAGAGGTTCGAGTTAAAGAGACGCCATTTTATAAGATC TTACCGCAATAATAACATAAAAATTTACTTCCTCTTCTTCAGTGTCTTCT CCACTGTACAAGTTCTTACCACAACAAAAAGATAAAATTTCCCCGCCCTC CCCTTTCAGGTTTTGGTGGAGATGACAGACGGTGGTTTAGATTACACTTT CGAATGTGTCGGTAACATTCACACCATGAGAGCAGCTTTGGAGGCTTGCC ACAAAGGATGGGGTGAATCCATCATCATCGGTGTGGCTGCATCAGGACAG GAGATTAGCACCAGACCATTCCAATTGGTCACTGGCCGTGTATGGAAAGG ATCTGCTTTCGGAGGTATGCGTCTTTTTTTCGTTTGCCTGGTTGGTGAAA ATAATGTTTTGTCGAGCTTATCTTGTGTTCTTTTAGGTAGAAAATTATTC TGTTACCAAAGAATTTTTCACCAAAGTACCAAAAACTTGCCTTTTTTAAT GAACCTGTCCCTTTTGTAAAAATTTTGGTGGAAATTCAATATTCAATTCC TCACAGGAAAAAATGTAAAGCGAATTACATTAACTTTTGGTGAATTCGCG AAAAGCTGAAGTATTTCAACACATTTCAGCTTTACACTGTAAATGCAGTC TGAAAATTACGATGTTTAAAATGCTTTTAATTTATTATCTTTCTGTGTTT ACTGATATATCTTTTAGGGAAGATCAGATGGTTTGGTCTTCAAACATGTA CATTCCTTCCATATTCCTGAGCAAAATTTCAAATCTTTTTTGTCTTTTCT AAAGTCGAGATAATATGGCAACTTGAAATCTCTGGAATTGGGCTTTGCCT CTCGGCTCTCACGTCAAATCTTATTGCTTTCTTGCTAAAACTCAAAAACT CGAAAGATTTACTCGACTTTGAAATAAGAGTCGAGAAGATTTGGAGGTTT CACTTAGAACCATTAAAATCTTATTTTTTTCATATTCACAGGATACAAGA GTCGTGACAGCGTACCAAAACTCGTCCAAGATTACATGAACGGAGATATG AAGATTGACGAGTTCATCACACATCATTTCCCATTGGAAGAAGTCAACGA TGCTTTCCATGCCATGCACGAAGGAAAAGCGTGAGTNCACACATCATTTC CCATTGAAAGAAGTCAACGATGCTTTCCATGCCATGCACGAAGGAAAAGC GTGAGTTATTTTCTCATTTGCCAGTACTAAACTCTTCGTCGCTGGCGAAA AATATAGGGCTTGGCCTAAGACATTTTCTCATTTTCTCTGAATTTCCTTT TGAGGTGCTGGTTTTAGAGCTATTGGATATTTTTCATTTTCTTGAAATTC TGTTGTGGTCAAATCCAAAGGGTTTGGCGCAATGAAGTGTAAGCCCGAAG GACTAGAAGTCAATCTCCTTGGTAGGATTTGAAGCCAACAAATCCTACCA AAGTTGCGCGGCCTTGAGCGGTTCTTACACAAATGACAGATTGAAACTAA AATTTACCGCTAAATTTCGAAAAAAATATCAATCGTAAACAAAGGAATTG CTAGATTCAATCTGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNGGTTAGAGATTGAACTCTAGCCCTTCGGGCTTTAAA ATCAATGGTTTGGCGGGAAACATGCCATTTTCGACTAGACTTCAATCTTC AGAAAGCTGTGGCCAAAATCTTACTGAAAGTTTTTCCAAATTTTTGTTCT ACGACTAATTTATAGACGATTCGAAACGTAGCCAGAATCTATGACGGTTC GGTAAAAACCCGCTATTATACGCTGAAAATTAATTTGATGGTTTTTATTT TTTAGCATTCGGGCCATTGTTAATTTGTAAAAATATTGGATGGATATCAG AGGTTGGTTGATAACTTGGTGGTTGTAAATGAAATGGTCATATTTGGCGA TCTGACCATGTCAGTGAAAATATTTTTAAATTCGGTTATGATTTTGTAAT GATTTTTTTTAAACCTTACCACATCTCGGTTGCCGTTTGCTTGTTTATGT TTTTTTAAGCTAATGTAGATTATGGGAGTATGGTTATTTGCTCTGGAAAA TATATGATTTTGAAAAAATATTGAAACTCTTTGGTTTTGTATGTGTATTT CAGAGGACCATAGTTCGCTTTCAGTTCACCTCGCTTGATCTCGCGCTCCG AAAACAATTAGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000154TCONS_00000154Clytia hemisphaericatranscript
TCONS_00000153TCONS_00000153Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
Alcool deshydrogenaseTCONS_00000153-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:346302..354514 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ADH5alcohol dehydrogenase class-3 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1227.73 1189.49 1790.6 1918.68 68.89 54.94 222.13 226.51 315.29 288.33 282.42 360.27 562.9 642.44 574.88 446.59 395.17 362.79 528.69 432.94 469.53 473.66 654.91 675.09 275.29 263.36 572.33 823.17 466.34 516.31