XLOC_000087 (gene) - C. hemisphaerica

Overview
NameXLOC_000087
Unique NameXLOC_000087
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000001:333911..344253-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000087 ID=XLOC_000087|Name=XLOC_000087|organism=Clytia hemisphaerica|type=gene|length=10343bp|location=Sequence derived from alignment at sc0000001:333911..344253- (Clytia hemisphaerica)
CCCCGACATTTTCTTCCCCGATAAGATATTAAAAGCGTTGCATTATAGGC
TTCATTAATTGATTATTCATTAATCGGAAAAGAAGAAGAAAATGAAAACG
TTTACCTTTATACCAAATCATCCATTTTACAGGTCTTTAAAAACGTTCAT
AATGAAATTCGAATATCTAGAAAGCCTAATCACGGTATCAAAACAAGAGG
GCGTTATCTCTTGGGCGGAAATTACAATCACCCTTGTGTGTGGTTTTCTT
TTATACTATCTCACACAAGTTGTCCACAAACCAAAATTATTTTGTAAACC
TGGTCTATGGTGTGAGACTTTAAAAGAACATTTGAAAGAGCTTGAGAATG
ACCAATGGCCATTGTTATGGTGTTTTTGGCCGTTATGGCAAGCAGCTTTC
CACACACTACTGATGAAGCCACAACATTTTGACTTTGAAAGGTAAGTCGT
TATAAGGTATATTTTCAGGGAAGGGGGAATGTGATATTTACGCTTGGCAC
TATACGTTAGATCAACCAAAAAGGTTGTGATTTTCAAACCACCAGAGTAT
TTTGTCTTCCTTTCCAATATCCAGGGTATTTGTTTTTGTTGAGAGCGACA
TTCTAGAAATTTAAGTTCGCGTCAGAACTCTAAAAAATGTACATAATGTA
ATCTAATATAGCCGATCCAAAAACTGCATAAATAACTTATACTTTGTATT
TTACAACTTTAACCATTTTACTTGTCTTTAGGAAGGAGATTGAAACAGAA
GACGGGGGTTCGTTCACTTTGGATTTTTATGGATTCGAAGAAGACAATGA
AGACAATGAAACCAAGCCAATTCTTTTAATTCTCCCAGGAGCTACAGGTT
TGTGAAACCAATTATAAATCAATCACTTACATTTGGAAAAAACGTGAAAT
TTGAGTATATATTAGTTTGCTACAGGTGTATGAAACCCTTATTCAATCAT
TATAAAACCCCCCTCCCAAGCCATTTGTGTGATGTGATGATAGGGACTTT
TTTCCAGTGTGATTACGTGATTTGGAAATTATTTCTTTGTGATTGCGTGA
TCAGAGTTCAAAAAGTGATTGTGATTTGTTGTTTTACGTGATCGCGATTG
AAGACAAAAAATTGCGTTATATCGTGAGTTACCACTGGGGAGCCTCTTAT
AACGTCAGGACGAAGCATTAATTTGGGAATTTCAGCTTTCGCAATCGCAT
TCAAAATTTTACTGATGTTTCGAGGTGGTAAATAGACGTGTGAAGCATAA
AGCATTTTCCTTTCAAAAGTAATCGACTACTTGCAAAAATATCAAAGGGG
GGGGTTTCACTTTTACGGTATGACGGTATTGGGCCTTTTTACCCCCGGTA
AATCGGTATTACGAGAAAAAAACGACGGGATTACGGTATTTCATTTTCTA
CCGGTATCGGTAAATTGCCTGGTTTTTTGTCGGTATTTCGATATTTTTAT
CAATAAAAAACGGTATTTCGGTATAAAACTATTTACCTTTTAGTTTCTTC
ATGAGTTTCATGGAGAAAAATTTTCAAAAAAGATAAGTCTATTCCGCTAT
TTTAACCAGTAAAATTTTCTTGCTCGCTTCACTCGCACAATCTTGGATGT
TCTATTGACTTATTGTCATGGTAAGGTTTTTCAAAATAAGCAGAACTTTA
CGATATCTAAACAAATGTTTTCGTTATTTTTCTGCGGGCGAATTTTTTAA
TGACAACTTTTGTGATGCAAATACTGCATCCAACGAAAGAGTCTAGATAA
AATTTTCTCCATCAGCACTAAATGATATGGTCGTCTCTCCCAAAGAGAAT
ATAAAAACCAAGCTTTAGCTTTTAAAGTATCTTTGTCTTCACTTATATTG
CTACTACAATACAATACACTGATACTGCAGTAACTTAGAGACAGTAAAGG
CGGTATTTACTCCTTCAATGATTAGTAAAAGTAGGTAGTTCTAAAAACAT
CTTGTGCAGCATCGAACGATTAAAAAATAATTCACATCATGATGCACATG
ATGCGTTTTCAGGCAATCTAGGCATTCTAAATTTTAAATTTTTTCTTGGG
CGAAACTCTTAGGACGCGGCACCGGGTACGGCAGGTACGTCGCTCACCGT
ACCATATTTTTAGCAAGTAAGTAACTTTGGCACGGCAGACCGAAAATATT
GCTTTATAAAAGCTCAAATAGCTGTAAAAGAGACCTTAAAAAGTCGACAA
AACGCGAGAATAAGGTCACTAAAACTAGCAAAAAACTTTATATATTGGCA
AAAATGTTTGGTATAAGAATAGGTCAATCTGTTTAAAAGAGACCATAAAA
AGGTTTAATTTAGCCCAATAAGGTCACAATCTCCAACCAAAGATGTAAAA
GCTAAATTGGTGTGTGAACGTGAAAATATTTTTTTTCGCGCGTTAATAAG
TGAATTGGCAAATTTGTGCGTGAATACCTGAGTTGAGGGTTGACTGGGGG
CCTCATAAAGTACAAGACTTGTTTGTACAGTTTCTAATTTGTTACTACAC
AATACATTTGATAACTGAAAATTGATTATTTTCGAAAAAAAAACATAAAT
TTAATATCGGTATCGGTATTAGGCTTCCTTCACCAACGGTATTACGGTAT
TTAACCCAAAATTTTGTCGGTATGACGGTATTTAAGACCCCTGAAACCCC
CCCCCCCCATCAAAGGCCTTCAAACTGGGAAAATGGAATTTTAGGTTATT
TTTCATTGAGAGTCGAATAAAGAGCTGTCAGGGGATACAAGGGTGTCAAA
TATTTACCGATTCTCCTTTTTTTTTACATTTTTAGGACACAGTGGCAAAG
TTTATGTTCGAGAATTTATTTCAATAGCTTTGAATCGAAAGTACAGGTTG
GAGTCTTTTGAACTTCTAAAACGTTAAACCAAAAAGTTATTTAACAACTC
ATAATCTTCTTAAAATTCAGCTACTCCAAGCTCTATATTATTGTTTTTAG
TTGTCCTTAATTTTTACATCTACAATCATGGTCGATAGCTCATTTCCTCG
TTTTTCGAAATTTGGAGTTCCGGCGAGAAAGTCGATTTTGGGCCATCTCT
CAAATTTAATCGGATATTTCAATTTGGCTCGGGTTTATAGACCTCCAGGC
TATATTATGAGCCTTATTGGACCATTTTTGAACTTTTTGATCCTCGGATC
CTAAGCTCCTCCTAAGTTTTAAGTCTCATGTTAAAACTCAGAGTTAAAAC
TCTACCCTTCCAACCTACTTCAGAGCACTTACAAATCGATTGTGGTTCAA
AACTTCCCGGTTGATTTCCTTTTTTTCTCAAATATTACGACCATGATTGT
AGTCACAGTAAAGTATAGCATCAAAGTAATTAATTTTTTTTTTCACTCAG
AGCTATTGGTCTTAACTTCAGAGGCTGGGGACGAGGTGTTAGACTTAAGG
TAAGATATTTTTCTGGTGATTTTTATTTTTCAAAATGTGGTTCAAAATGA
TTGATTGTTTCATCAGCCTATATGAATGAAGTTTTAAAAATAGGTTTTAA
GGTAAATTTTACAACAGTTATTTTAAGCTTTCTTCTAAAAGTAAGAAACT
ACCTTATTACACGAATATTACTAGGCAAGTATTCAAACGGCCTTGAAATT
AACACTCCAAAAATTTAAACAAATTTTATTTGCTTTTTCAAGGTTGGTTG
TAATTAAGGGGATTTTTATCAACACGAAATTTTTCAATAGCATACCGTGG
CGAATTTTTGTAAAACGTCTTATCCTCTAGCTTTGAGAGAAATTTTAAAT
TTGATCGCCGTTTTGGGGGCCACATACGATTATTACTTCTCTCATTTGAC
CGAAATTCAATCCCGTCAACCTTTGCGTTAATCATGCTTGCACGCAAATT
ACACTCAATTACAAAGAAAAAGTAATAACTTTCACGATTTTTGAATTAAA
ACAAAAAAGGATTATGGGATGGAATTTCGGTCAAATGAGAGAAGTAATAA
TCGTGACATTTGCACGACGAAGCGCTATTCGTGTTAATAAAATGGCTACA
GTATGTGGCCCCCAAAACGGCGATCAAATTTAAAATTTCTCTCAAAGCTA
GAGGAAAAGACGTTTTACAAAAATTTTTCTTGCATGCAAAACTTTAACAT
CTCTACTTTATTTCCCGACAGTTCTTTTTCAAAATTTTCAATTTTAACAA
TATTTTTCAATCGCTTAAAGACAGGTAGCTTTTTTCTAATGGCCCCCAAA
ACGGAGGTTTGCAATTTTAGCGATTTCTCGTGATATCTTTAAGATATTAA
TACAAAATTTTGACCATAGTTTTGAAATGTGATTTAGAGGGTTTTGGGCA
TAAATTAGTTTGATAACATTTTTACAAAACCAGGTTGTCAAAATGCAGGT
TTGGGGCCCCCAAAACGGAGGTGTAGTTAAAATCAAATTATTAAGCCCAG
TGGTAATAGGGGGGAAAACTATGAACATATTTGTNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTG
TGTTTTCCCTTAAATTTACGACCCGATGGATGTAAAATTTATGATTTTTA
TGAAATATTTCAAGATTTTCGATATTGCAAAGTCCAAACTGAAAATTTAG
ATATTTTCAAAATGACAATTTTAATTTAACAATGTCTTAATCAAGTTTTT
GAAAACAAATCTCTTTTGAAAATAGTTCCATTCATGTATGGAATAAGCTG
TGAAAATTTTAGAAAAAAAGCTTAACTGAAACTGAAAATATCAAGCTTTA
AAGATATTTTTCTCCTATATTTTGCAGAAAATGACAGAATTTGCCATTTT
TGCTGATTCAGCGAAAATTGTTATATATAATGTTAATTTTTTGTTATAAG
CTATTAACTCAACCTGATAGGAATGGAATTCCAAGATTTTTTGCTGTTTT
TCATATTTAGAATTTTCGGTTTTATCAATGCTGATTCTAGGGTCCCAAAA
TACTGGTTGACCTTTAAGATGCTATATCTTTTACCCATCCTCTAAATTCA
CAGATGTATCTGCATTTTCTGAACGGCATTAGGTGTAGAAAGTTTCCTAT
ACCCCATTTTCATAACTTATTTTCAATATCCAAGGATATAGAGTGAGTTA
TATGCAATTTTTATCTAATTGTGGTGTTAAAATATCTCCTTCATACGCAA
ATATGTCATTTTGAATCTGTCTCAAACCATCAAAAACATGCTCATTTTTT
AGTATAACCATCATTCTTTCTAAATAAACAAAAATCGTTTAATTCTGATA
AATCTACAAGTCAGAATCCTCATTTTATAATGACAACCTCCGTTTTGGGG
GCCGTCTCCGTTTTGGGGGCCATATACTGTAGTAACATTCGTGTAATAAG
GTATTTTGTTTGAAAATCTAGGGATTTTGAACCATGGCCAGTTAATATAG
GGTAGGAAGATTGCCCAGTTCTGGGTGTGGGCGGTCAACATTGCCGTTAC
CCAACGTCTTAGAGTATACATATCTACGCCCCTGATGTCTAACAGCTCTG
GTGAAACTTTTCCCACAGTGGAGATAAAATTTTCTATTGAAAAACCCAAT
GGGGATAAAAATTCTAGTGCTTTTTTTTGGTGTAAAAATTCAGTGAGAAT
GGTTTTGGAGTGCAATTTTTAAGCATTGAATTTTGAGTAGGGATGAAATC
AAAGTCAATTTCCCAGTGGGGATGAAATTGCAGAGTATTCTTCTCACCGG
GGACGAGATTTTGGTTGAATTTTCAGTGGGACTGGGCTCCCAGCGGGTCT
GTGACACAGGGGTGTATAATCATTTCAGACAGAAAAAGTTTCATGTGTCG
GGAATTTATCGGAAATCAAAGCAGCGTTCAAACATATAACAAAAGAACAT
CCAAACGCCCCCATTATGGTTATTGCATCTTCTATTGGAGCGTAAGTTGG
TTTTATTATAATTCCATGAAATTTAGGACTTAATACAAGTTTAATCGACA
CGAAGTAGTTTTTTTCTGATTTTTTTCGTTGAAAACTGCAAAACTATATT
GTTACTCTAGAAATGGCTCAATGGAAAAATCTATTTAGCATAGCTGAAAA
GCTCTTGCCATCTGTTTCTTTAAAGCAACTAAGGAAATTTTGATCAAAAT
TTAGTCGTTCTGAGCTAATAACTAGTTGGATGGGGAGGTAAATGATCTTA
TTCAGTCTTTTTGGGAATTTACCGTGTAAGGTTCACAGGATCTTAAGACT
GGACACAGGTCATGCTCGGTCAATGGCTAATTTTTTCACAGCCGCAAAGG
AATATGGAGTGGCTTATGGAGTGGCTTTGACCACCACATTATTCTTTACC
AGTTTTTTGTGTTGGATAGATGGTTTCAGCACGGAAAAGCATTTCAGATT
ACATCATCTCCTATTCAACAAAAAGATCAATTGTCTATTTCTTTGATTTT
TACCTTATAGAGTTACATTCACAAATTACTTGGCAAGAGAAAGCAACAAA
ATCAATCAAAACATAAGAGCTGTTATGCTTCTTGGCGTTCCTTGGGATCC
TATGGAATCCAAAGCGAGGTTATCGGAATTTTGGATCAATTTAGTCGTCA
ATAAGCACATGACTCAGAATATGATTAACCATGTTAAAAGGTCAGTTTTG
ATACCCTGGGTACCAGAGGCCAAGTTTTCATAGTGAAAATATTAACCGAT
AGTTATTCGAGCTCTGATACTCACGGAACAGTTTTGGGCCCTGACGTATT
AGCGATTTTTTATGTATTTGTCTTGCACTTTTGAGGACGGAGGAGTTATA
CCGTGAAAAGCACAGGTCGAAATCATATATCGACGCTGTTCCGACCAATC
CAGATTCTATTCAACCATGGAGGTATAAAGAAAGACAGGAGAAGTATGCT
ATTGTAACCAAGCTCGCCCTACGATTAAAAAAGTTACGATGTATGCATGC
TCATAATCTCATATATCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAAAGGCTAGAATCTTCAATA
CTGATTATTAGAATGTTCAGAGCAAACTTGAGTTCTACTAAAAAGTCTTA
TTTCATCGGGCGAGCTTAGAATTTCTTTTGATTCATTTTATAAAAGAAAT
CAAAAGACTTTAACGACCAATTACCGACACATTCAACTCCTGTTTTCTTT
ATACCTCTATGATTCAACGCACAATCAACGAAGAGAAAAGTAACCATGAC
GACCATCCAAGATCTTGGATGAGGTTCAAAGTTGATATTTTTATTGCCGT
CGTTGAAAACAGAACTAAAAAAAAAGTCATCTTTGCTTTTTAAAAAGAGT
CAGTGATAGAGAATCATAACATAAAGTCTGTCTATTATTTCTATTCAATT
AAAGTGACATTTCCATAATCAAAAGTTTAGTAATTACTGTTATACATTTG
GGGATCATGTAAAAGATTTCTTTCGAAAGGAACTCACTTCAATAACACTT
GGAGGTTTCTGGGGAATTCGTAAATAGTAAACTGCATACTGATACAGTCT
GCTAGACATTAATATGGTAATATTTCCTCTTCATCTTTGATTTTTTCTAC
AGTGATTAGATTGACACATGCGCGATAAAATTTCTATGATACTTAGGGTA
GAGGAGTTATTGAAGGGACTTAAGGGACTTTCTTTTAGGAACAATGCAGT
TGTCGAGGATAGTGTTCAAACGCTCGGGATTGACTTGGAAGAAGTTTATC
AGGTAAGAATAAAAAACGAAATTACTGACCACGATTGACAACTTTAATCA
ATCAGTACCATTCAGACTTTGTAATAAGAGCACGCTATCTTCGTCTGTTT
AAGAGTATGAGAGGCAAAAGTCGATCGGCACATACCACCCTTAAAACCCC
AAAACCTTAGTATTTAGGGCGTCAGATGGGCGTCATGTCGACGATAAGTT
TCAATTTGACTGTCCTTTTCTTTTGTTTTGACTCTATTTTGTTTTTGACT
TTTTTTTGTTTTTGTATTTTTCTTTTCTGCCTTCTATTTTCAAGTCACAA
ACAGTATGGGACTTTGACGATCGTTACCTATGTCCATTATATGGTTATAA
AGATCACATGGAATATTATAAAGATGTTGGTATTGTTTCGTTACCGTTAG
AAAAGATCACTGTTCCTGTTCTTGCTCTGTGTACAGAAGACGACCCTCTT
TGTCGTGGGAAAGGTAAGCGTTTTGGATGTTAAAGAACAAAAGAATAAGT
ATAGAAGTTTTTCATATTTGGTAAAAACACCCCCTTCTCACAGACCCGGT
ATGATTTTTTTCAGCCAGTAGGGGTAAAAAACATAAGGGACTGAAACTCG
ATGGGGATTGATATTTCCATATTTTTTTATGGCTGACGATTTAAATTTTT
TTTGTTTTCAAGTCAAATTCAGTGGGATGGGAAAAAAGCGTTATATTTTG
CAGTGATGATTGGTTTATTTTATTATTTTCAGTGAGAACAAAAATTGGAG
GATAATTTTCCACTGGAACCATATTTTGGCCAATTTTTCCAGTGGGTCTG
TGAGAAAGGGGTGTGTAAAATTACAAAGACCTGAGTTATACGATTTACGG
TTGAAATTATTATTCTGAACTTTCTGGCTGATACTGAAAATATACTTAAA
TCTTGACTTTTTCACTTTTAGCAATACCATTACAGAAAATCATGACCAAT
AGTTTACTAGCAGTAGTTACAACAAAATTCGGTGGGCATTTGACGTGGCT
TGAAGGAATCATGCCAACTTATAAACGATTTCCACATCGAGTCTTTGAAC
AATATGTTGATATCTTCTTTGGCGAAACTAAATCTGTTTAAGGTGGGAAT
ACCTTAGGGAAGAAATTTTGGCCGGAATTTAATTTGGCGGGTAGCTGAAA
AAGTTTTTTCAGAGGGAATTCAATTTAGAGAATGGCTTGAAAAATTAAAT
TTTGTATGGGAATTCAATTTGGTGGATGAAGGATATTTTTGGCCAAAAAT
GATAAAAATACCTGTTTCATAAGACCTGAAAGAGCACACATTCGAGAATG
AATACAATAATTTAAATTTGCCGGGAACTTACTTTGGCCAAATCTGCCAA
ATTTTCTTTCCGCCAAAATTTCTTCCCTTAAGGGTATATAAACTTCTGGA
TTTTGGGCGGTTTTTGATCCTTAATCCCAAAGACGCCACCTCCTTGTTAA
TCCTTCCTGAGCATACCCTGAAAGTCTCAAAACTTTAGCATTAACATTAC
TTATGAACCGTTAGTGTTATATATTTCCCTTGGCAACGGAATGTTGCTAA
GGCCTCATTTCCAGATGGTCTCCCACCTTAGCCTTTTTATTTGTGGCTTC
TAAGGCTCAATTTTAATTTTTAAATAACTAGAAATCAGAAATCAACTGAC
AGGAACATTTCCATGACGTTTTCCTGGAAAAAGGCATCCAGTAAAATTTA
TATTCAAAAGATTTATAAGGTTATTAATAATACTAATATTGAAAGTAATT
ATTATACCTTTCCTGACAATTCGATCCACAAGTTTTTGAACAATATACGA
TGTGTCCGGGAAAAGAAAGCGAAACAGATTCTATACTCGAGTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000152TCONS_00000152Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000152-proteinTCONS_00000152-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:333911..344253 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.15	0.16	0.23	0.19	17.6	13.47	20.25	20.16	8.82	9.83	5.36	6.87	6.55	6.08	3.41	2.39	3	2.89	4.16	4.99	2.39	1.92	1.17	1.3	2.95	2.09	1.76	1.66	0.06	0.11