XLOC_000080 (gene) - C. hemisphaerica

Overview
NameXLOC_000080
Unique NameXLOC_000080
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000001:129901..132533-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000080 ID=XLOC_000080|Name=XLOC_000080|organism=Clytia hemisphaerica|type=gene|length=2633bp|location=Sequence derived from alignment at sc0000001:129901..132533- (Clytia hemisphaerica)
CTTTCACTTTCGTTTTCTTTCAATTTTTCAGATTCCTAGCAGCCAGTTTG
AACATCTTCAGCTGTCAGCCATCAGCAACGTCTTCAGCACAAAAGCAGTT
ATTTGCATTTCTCTTCAGGTTTNTCAGCAACGTCTTCATCACAAAAGCAG
TTATTTGCATTTCTCTTCAGGTTTTTGCTGCTGTAACTATCAATAAGAAC
GATGAGTCCATTAATTTACACTTGTCTTGCTTTTATTTTCATTGTCATTG
CATTTTGTTTTTACATTGGAATGTTTCGTTCAATCAGCATCAAAGTTTCC
AAACCACCTTTTCCAGTTGGAGGACATTATTTATACAAATTTTACCAAAC
ACCGTATGCTGAAGCCAGAATGGCTTATAGAGCTATCAATAAATTCCCCA
TAAAGAAGACATTTAAATTGGTTGGAATTTATTATGATGACCCTGATAAA
GTATTTTATTTTAAGTTTTTCTTTTAAAATTTCTTTCTTCAGTCTTTTTT
TGCTTATGGTACCATGCATGAAGTCGAGTAATTTGCATCAGTGAAGGCTA
ACATGCATTTCCCTCAAACGAATAACCTTGCTGGTCATTAAAATACAAAT
TTAAATGAAAACAAAAATGGTATAGAGCTGCTAGCGGAGCTGCGTAGTTG
ATTTGTTTTGAAATAGACCTTTTTTCAAAGAGGCCACCCTGTTGAATAAT
TATGTAGTCCAGCAGAAAAACAATGATAAAACCATGCATAATTATTACAA
TATGCATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNACAATATGCATGATATAGTAATTATGCATGGC
TCTATCATTGTTTTTATGGCTGGACTACATAATTATTCAACAGGACGTCC
TCTTTGAAAAAAGGTCTATTTTGCTGCCTTGATTGGTCAGTCCTTTGATG
GGTATGCAAGTTTCCCTCCACTGATGCAAGTTACCCGACTTCACAGTATA
ATAGAGCTATTCCTAGTAAACCCAATGCCATGCATGTTCAATAATTAGAA
ACTCAAACAATAAAACAATAAACAGATGGCTGCATGGGTGCATAATTAGC
ATATAAGTGTGTAATGATATTTTTCTTGTCATTGTTTTGATGTTGGAATC
TGCCTGAGATTAGAGGAGGTTTAATCTATACTTATGTACTACCTTCAATT
TGGGTCAAAACTACATTTGCAAATTTGCAGCTAGAATGCAACAGCAAATA
ATTTAATGTTGTGTTTAATTTTGAATTTTACACATTTTAATTTATTTGAG
GGCCAAAAAATAATTGCAAAATTCAATTAAATTGAAAGTAAGCCCAACTC
TATCATTCAGGTAAAAGAAGATTCAACACGTTATGCAGTTGGCATACTTG
TCAATAATGATGATTTTGACAAGAACAAGGAGCTTGCATCAACAATGGGA
AGTGTTGGCTACCAACATATTCAATTACCGCAAATTGATTCTGTTGTTAC
AACTTGTTTTCCTCTTAGAAGTGTTTTGTCCATCTTGGTGGCAATTCAAA
GGGTTTACCCAAAACTTAACAACTTCATCAAGGTGATAAAAGTCAAGCAG
AGTATCTTTCGAGCACCATTTATTCGGTGACATTATCCGGTTGAAGTTAA
ATGATGTAAAGTAGAGAAATGCCGGTACAAAAACTTGAAGGAAAATCAAC
TCTATTTATTGCACTGATGCTTGTGAAAAATAATGCTATTGTATTTAGAA
TTTCTGGGGTCTTAAGATGCATATAAAACCTAATTAGGACATTAAGAGAG
CCGAAATATTCTTCCTCACCCAACCATGGTGGGCAATATTCAATATCACT
GTATTATATCGATGAAACTCAATTTCCCAGACCAAAATGGTGATAAGGAA
AAGTGCTTGGAAAGAACCCTTTCAACAAGCTTATAAAACTTAATTTCTAG
GTAATTATTTTTCATTGTAATTCCTTTTGTTTTTCAGAAAGAGAAACTCC
AGGCACACCCATGTACAGAGTATTACCCTCATGGTATGGAAGAAATGCAT
TTTATTAACCCTCTGGAAAAGAATGATTCATTTTATGTACCTGAGTATCA
CGTGACATATGTGGAATACATTGATTCTAAAGAAGATTGAACTGTAATAG
AAACTTAAAGAAATTATCTTCTTGGTAAATAAAAGTTTGCTAGAGAGACA
GTGAAATATGAGTTACAGAATTTCAATTTCAATTATAGGAATTATCTAGC
GAGAGACAAGAGGGGTGCAAAACTTTTGTAGGAGAGCAGATTTTTATGAC
ACAATGATTATCTTTTTATATTATCTATATATTAATAGTGGTAGTCTGTA
TGTGTGTTTGTCTGTGTTTTCTACTTTCGTTTTCGCTTTGTTTGTGTTTT
AAAATTATGACTTTTAGTCTCTTGCTCCACAAATTTGTTTTATTGGATTC
GCACCATTTGCAAAAGATCGGATAGAGCTTGGTTTAGACTTTAAAGTAGG
GGCCACTATGTCGTGAAAAAGCTTCCCGTGTGCAGCAGCTTGTGCAAAGG
GATTTTATGATTGAGTATTGTTCCTTGAATGTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000141TCONS_00000141Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000141-proteinTCONS_00000141-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:129901..132533 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.89	21.39	13.36	11.66	21.02	14.06	12.75	12.5	11.1	10.82	9.84	10.13	8.13	7.68	9.51	9.39	15.33	13.31	6.51	7.44	10.81	10.74	21.76	20.46	4.72	6.64	16.33	13.19	15.96	12.24