Error message

Warning: shell_exec(): Cannot execute a blank command in include() (line 59 of /var/www/marimba/sites/default/modules/tripal_cvterm/theme/templates/tripal_feature_cvterm.tpl.php).

XLOC_000072 (gene) - C. hemisphaerica

Overview
NameXLOC_000072
Unique NameXLOC_000072
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000001:2711891..2719356+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000072 ID=XLOC_000072|Name=XLOC_000072|organism=Clytia hemisphaerica|type=gene|length=7466bp|location=Sequence derived from alignment at sc0000001:2711891..2719356+ (Clytia hemisphaerica)
AAAAACGATATATATTCAGGTAGTGCAGAAAAACAACACGATTCTCAAAA ATCAAGATGGCGCATCTAACCAATGATCCAAGTCATCAACAACGTTGGAT TTGCATCTATCCAGCTTACTTAAACAGCAGAAGAACACAAGTTGAAGGTA GAAAGGTATCTAAGTCTAAAGCTGTTGATAATCCTAAAGTTAATGAAATC AAAGATGTTTTAACCTACCACAAATTCAATTTTGTTGTTGAGGAAACAAA GCAATATCCTCGAGACAGTTTCAAAGATGCGTTTTGCAAGGGGCGAGTTC GAGTTCAATTGAAAAATAGTGATGGTACACCATTTAATAAAGAATTTACA AcaagaaaagaaatactttatATGCTGGGGGATATGATTCCAAAACTGAA AGGAAGGCAAACTAAAGGGGCAACAGCAGGTGATTCAAATCAATCGTCTG GTTCGAGCAGCAACAAGAAAGGAAAGAAGAAACGTTGATTATTTTACTTT GTACTTGCTATAGGAAATATAGTTTATGACAACTTTTAGATATGAAATTT TGATGTTGCAAATATGAAATGAACCTTTTGCTATAATCAATATATTATGT catgtatataatatatatgTTGAATAAATTAAAGAAACACAAGCATCAAA AACAATgatcagaaaaaaattggtgCATACTTATGATAATTACCATAACT TTGTGTAATGCTGACACACCTTGAAGTCATGCATAGCCcacaaatgaatg acctggctggtcattaaaaaatacaaagttaaattaaaacaaaaatggta gagtagagctgcgagtagagctgcgtagttcatttgttttgaaattttgc tgctttgattggtctgtcatttgatggctatgaaagtttccctccactga ttcaagttacccaacttcacggtaccttgtctaattcagtcatagcaact atctggtctgcaaagtaAATGGAGTAATANNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtgcgtagttcatttgtt ttgaaattttgctgctttgattggtctgtcatttgatggctatgaaagtt tccctccactgattcaagttacccaacttcacggtaccttgtctaattca gtcatagcaactatctggtctgcaaagtaAATGGAGTAATTCTTTAAAAA GCTTTCTCAGGTCAGAAGGTTCTGTTTATTTTCACAGTGTAAACAGGGTT ATTTTAAAAACCATGGTATCCCAATTGGTGAATGACTATGGTGGCATTAA ACCAAGATATATACAATATGCTTTACTTTGTCATTGTTTCAAAATACTGG AGTTTATGATTTATTTGACATGTaatcctgattagcaaaaggtctaGAGA ATGTCACCCTTCAAATgtctttaaacatttttaactGTTTAATGATGACC GGGTTGAGGACAGTTGAGGATAAAaagcttggaaaatatttttttttaac tggAAACATTCTCCTGTCTTTATTTAACATCCCCTGGCAGCAGCTATAAA GTTTAAAAGCTTATGATTACATGTGCTGTGGATTGATTGTTAAGTTCAAA TTTTTCATATATTAAATTTTCTTATagtgaaaataataacaatgagCTCT TACGCAAGAAGAATGGCAATGCTCAGCGCAAAAATCTTTGGAAATCTACC AAGGCCTGTATCTGAAAGGTAACAATTTTAAGATCTGAATTTTAGGCTGG ACCTGGAATTTGTCGGTCGCttaggaaaaaaagttattttgacgATTTAT GAAAGTTCTGTTTACAATTTCCCAAATGAAAACGAAAGAGCTAGAGCGAG ATTAACACGATTGAGGTTTTGATtcggaagaaaaaaattgtttatcgAGT TAGGATCGGTCAGATTACGAAGTAatccctgaatactaatgtatcaacta ctaacgaacaaaacttgatttacaagtgtgaatatctaaccaaacgacgt ttgataaacggtcaacttgattttctttatgatgaaccatataaGAGCAC GAGTCTGCTAATGTCAcccattttcggttttgtcaacttttcaactttaa ggatccagtgaaaaatctaggtgCATGCAATAATGATACCagctgatgtt ttttatcagtCTTGATACTGGTAAGcttaaacagtcatttttttcacttt acaaagtacacaattttttcagggcagcttttttcatcaaaatgtgaacg gaaaatgaggtttttagcAAATTGTCTAAGTTCATTATTTAATAATCTAG GCCAATCATGTCTGATcatacttaatttttctttttattaNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAATTATCc aggaataaaagtgaaattcaaaactttattttttccaaattttttcaccT ATTTGGGTGACATTACCAGACTCATGCTCATAAATGAACTCATAGTCTGC AGCTGggagaaattttcttttttttcccagccggtttccggaaacgctac attttttattttcgccttagaGTGAATTTATTGACATTGATGTTTTATTA TGTTCTTTGCATCAGATCACAAAAGGTAATTGATCATTTCAAAGCAGCTC CACTTGGTCCAGTTCATGCCAACTACTACCCACCACTGAAGCAATATAAT TCTTTGCTTCGAAAGTTACGTTTCCTTGGAATCTATCATGATGAACATAT GGTTAGTACTTACCCAGCTTGtccacaacgttgtttcaacgttcttctaa cgttatatggacgctgtgaacattagataaacgttgaaacaacgttctgt gccagctgggtatctgaaaaattttgtttcttaataatttacaaaaaatc acaaaacagttttttgatGTTAGAAAAGTAACTCTTCACTACTGCTACGC AtatcattttgaatttgttgCGACGTATATGTCTCCTTTTCGAAATAAGT ATTTCGACTCAAATTCtatcaatattttgattatttagGATTTTGTTGAA GAAATGGCACACAAGAGAAAGCTTCGTGGAAAAGGACCTCCACCCAAAGG TAACAATCATTGTACCAGACACTTTTTTAGATAGTTTTATCGTGCTTCTC CTAAGTTTATTCTTTTAAGTGGATTGATTTTCACTAGCACAgaaaatttt cgcgaatcagcctctTTTAGGTATTATTTCTTTCCTGACGGTTTTAGTAA AAGAATTTGCAATAATTTTATTTCGCGAGTTTcgtgaatttttaaaattt ttccgaaCATTAAATTCGTGAATTTTCGGAAAAACCCTCGAAACTGATTA CATTAAGAAAATAGAGTCGATGTTGTAGGAATATTTCGACGATCTttatg tcatcattttcaaccatATGAACATCGActctattttcttgttgtttttt atttaaaaatccaaggaaatgtttatttttgggttatgcttctttttata ctttttgaaattgtctggCACTGTTGGATTTTGATTACATTATGTAATTA TGATtaacttttgtttattttattattattattaggtcAAGGCAAAAGAT CCAAAAAGAAGTAAAGCTGACATATGTATGTATTTGCGAATGGTTTGTGT GTGATTTTTACTCCACTTGAAGATATCTTTATCCACTGATGCACTTAGAT ATGTTGAAAGTTTTGGCATCCGAACAACATCTTACAGTATTCCTTTTCAG AACTATTGTTTTTAATAGACGAAAACCCCAAACTCAATACTTATTACTGG AACATATCCAAATAATGATTTGCGTGTGATCTTTGAGAGAGATGAACATT AGATATATTTTTAACGCGGGCGCACGGAAGTAGAAACAAATTTCGGAACT TTTCCAACTGTTTAATTTTTATCTCCGTAATAGGAAATCACTAAAATCAC TACCGGTTCTTTCATATTCTCTGAAAGtcctttgtttgaaaaaaaaaatg cgaatttaaatttatgcaataagTTCTAAGATTTATTCAAGTTAACTTTG ACTTCCCTTCTTTGAATTTATTGGCCACGATGCTGCTATATTATGTAGTA TGTAAGCATCTGATTTatcaaaaaatgtataattgCGCAAGCTAAACTCA ATTAGACTAGAAGATTTTATTCTGTTGGTTGATAATGAATGAATGAtata tttttagtattttttataCGTGAAGCTGTAGATAGAGAAAATATTATTCC AACTTCGACATTCAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000130TCONS_00000130Clytia hemisphaericatranscript
TCONS_00000131TCONS_00000131Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000130-proteinTCONS_00000130-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:2711891..2719356 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
MRPS3328S ribosomal protein S33, mitochondrial Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
42.88 41.41 26.77 26.03 27.67 19.33 29.56 29.24 28.05 24.76 23.69 21.09 14.82 12.6 21.51 20.02 38.34 35.55 6.97 11.91 31.34 29.75 43.33 41.08 14.11 20.66 25.9 18.97 28.54 26.26