XLOC_000069 (gene) - C. hemisphaerica

Overview
NameXLOC_000069
Unique NameXLOC_000069
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000001:2597044..2606175+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000069 ID=XLOC_000069|Name=XLOC_000069|organism=Clytia hemisphaerica|type=gene|length=9132bp|location=Sequence derived from alignment at sc0000001:2597044..2606175+ (Clytia hemisphaerica)
ATATTATCACACCCTATCTTTCTAATGTAACTTAAGATATCTTTagaaga tattttaaatatttatttttaataaatagaATTGTTTGCAAAAAGAATGG TAAAATACACATCTTTGGAAATCAATTCAAATGAAGCCACAACTGTTTAT TTTGACGAATGTGAAAGGAAAGGTATGAAACTTTGTTATAAACAACTTTC AGttgcagtgctgcaaataacggcaaGTGACCGGTAGCGGTAATCACCGG TTATTTTGTAGTTTCTACAGACCATTCTTAAACTTACTTTTTCGTTTTGC CCGGTTAAAGTTTGAAGGCTATAAGGCTTCTTTCGTAAATATTAATCAAG TTaccttaaggtatgtgtacaccttttttccaattttttgtcaaaaaaat ttttttcactcaaagtggaagaaaagttactggatttcattttggtaaaa tcgcgatcttaaaatctttttatgatccagagttataaccatttaaattt caaaacaaagttcgtcttatgatggattatttactcaaataaattgtctc tttcggaaacaacaaagacaaaagagagaattcagctgatgttcattctc acctctattgaagagtaatatttttgacacatttctctgattactcaaat aaacagcaatcatctcgttaaaaatttcaaattgatgtagaaaaaaacga aattttaccacaccatactacttttaacgaagttaaagNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNcggaaaaacggtatttcttgaatttcttgagc tgtactttatattttttcatgaaattttgcacactgatgcaaaatgtcaa tacctaaattgtgagggagccagattttcgaaaaaaattcatttctggct gaaaatgccggaaataggccggaaatcgccgtttttctagattttcatcg gactttttccttataattggttgttttttcattcaaaaNcttacagataa ctgaaaaagtcacatttaaatttactttttggacctaccccggtggggta gaggtcctataaattaaccgatgtccgtccgtctgtccgtccgtccgtcc gttcgtccgtctgttaccaNgattaatagcaatgcccaccatcaagcatg tttcaattttcaataaaactgatttttgaagccggaactattttaaaagt cgccggaacgacctattttcgccggaaagacagtatctcttgaatttctt gagctgtactttatatttttttatgaaattttacacactgacgcaatatg acaatatctaaaatgtgacggagcccgattttcgaaaaacatttttttcc ggccgaaaataccggaaatatgccggaaaaaccggttttttttcgaattt ttatttttagtttctgattttttgcagaaagatgcgcattcgcaatgctc aaaaaatggccgagttcgatttttgagaaaaaaatttttccggtcgaaat tccggaaatcgccgtttttgcagattttcattgggttttttccttatatt tctatgtttttcacgcaaaaacattattgataacaacatcaagcatgatt caattgtcaataaaactgatttttgcgaccagaactttctatttattttt tccctacaacccttccctNNNNNNNNNNNNattgggaacatagtatcgaa attattttttcaaaattcaaaagctatgggtgactttaacttctttgaag taggtaaggttaaaattcttaagattttaattatatcttgcccagttttt taaaaccagctgaaacttttaccattagaaagagaatattattggctttc agaaaatatatacttttgatatataaaaatttgttgttctaaagatatga tcaattaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNtaccttaaaggaagaaattttggcgggaatttaa tttggcggatggccgaaaaagttttttcagagggaatttaatttggcgga tagctggataaattaattttgacgggaatttaatttggcagttgcaggat atttttggccaaaagcattattaaataagcaaaaaaacctgtttttggGC TTGAAAAAGCACGAATTTGGGGAACGcgcaaaataaattaaatttggcgg gaatttaatttgacggatgaaggaaaaaattaattttggtgggaacttaa tttggcggattatGGCTAAAACTGCCAAATCctgcaaattttctttccgc caaaatttcttcctttaaggtaattaCATTTCTTTAGTTCCTCATACTTa ccaaattataaaaatctAAGACTCCAAAATTTTCTAAGGGGGCCCCAAGA CCCCctgatcaaattattttcaCTACAAATTaaattaccggccaactgaa atttccttatATGCAGCACTGATTTGTGTCTTTTATCATAATCAGCTTAC CtatgaaaacttgaaaatagCTTAGTCACAGTAAGAAGTTCTACCATTTA CACTTGCCACTGAAACCCACAATAACTTTTTGACCCTCTTTTTGAATTAT TACTTCTTTTAGTGAAGCTCTATatctcttatttttcttttcaaaaaatg tcaaaacggTATTGCTCATTGTTTTAGATGCTGCTGGAAAACCTTCATAT GGACCTTGTGATATTCTCACGTTAATTTTAATATACACCATTTGGTTTAT CACACTACCTTTTACGTTCTGTTGTAGTTTCAAGGTAAGAAACAACttat taccttattggaactaatttttgcgggaactaattttcgcggtcgtaaaa aaaatatccaaaaaattgcatttcgtgggttttaattttcgcggttttcc ctttttttggacaaatttctttcattttcctagggatttttcaaattttt cgataaaattggaaaaaattgtattttgcaggaattaattttcgcggttt tccctttttttggacaaatttctttcattttcctagggatttttcaaatt tttcgataaaattggaaaaaattgtattttgcaggaattaattttcgcgg tttttgactctcaaaatttttcacgggatcaaattttcgtgattttgatg aaaaaccgcgaaaaacgctaaaattaaaacccgcgaaaattagttccaat aaggtacactgTTTTTTTCCGAAATTGTATAACTAAAATACGCTTCAGAT TAAAATGTCACAAAATTTTATGTTGAGTATCTTTACGACTTCTAAAGATG AATTTAACGATAAGCCAGAAAGTGGAAAATTCGAATTCTTATTATTTTAA CAGATAATTCCACAATGTCAGAGAGTGATTGTTTACAGACTTGGCAGAAT ATTACCTTTGAAAGGACCAggtattgtttatttttttaataatatgGTAA AGTATTACTATTATTTTCTACCCACATAGTTTGATTATTAGTCCATAGTC TCATTTAGGACATAAGACTATATCCAGGATAAACTGATGTTTTTACGAAT TTGATAGCTCTGAGTTAGcatgataaaaaatgaagtctTTTTAATGTGTC TGTACTTTGAAGTGAATTGTACTTTGTAATTCCAAGTATTTTGGTTTTTC CCATTTCGTTTAAAAAGCTAATTAACATTGATTATAGTCACAATCGATAc aaccttttttataagaacaatcttaaaagaacaatgctcaaaaattccaa aaataagAGCGGTTTTAAGAACAATGCCAAACCTGGAATGGCTAACCTTT TAGCAGGTTTAGGTTCAAATcagttatttttagaaatgccACATCTTTGT CCCTAGAAATAGGAGAAGGACAATTTTAGGCTCAAGGTACCAAAAAAAAG GATGGTGAGCCtcattcaaaatttattggctcttaaaaaaaagagtgtaa atAGATTATACCAGATTTTCTCTTCTAGGTTTGATCACAGTGGTTCCATG CATTGATAAATTGAAAAGAGTGGACATGAGAATGAGAGCATTCAAAGTTC CCCCACAAGAGGTATGTCGATTCacagtttttataagaacaagttttTCT TCACAGTTTTCATAAGTTTTTTATAGACACTATTTAATGTTCAAAGATAT GAGCGAAAGATTTTGTAAATGAATGGTGTTTTCCTTGtctgaaaacaagt tttaagttttttaatgatcttatagactttttttaatatttcaataTGAT ACTTTCCTTGAGAACGGTCTGAGGTCGAAACTTGTTGGGGAAATCAAATT ACGATAgacgcattctttttcaccgctCAACACAATATGATACTTAATTT TATGATTCACACTAAAAAGGGCTTTTCAAATCAGCATTcccttgaaaatt tttcttctgGGCCAgattattctcaaaaaaaaagtaaagatgAATATACA TGATACATGATACAAGAAGTATCGAAACGTCaagaatgaacaaaattttg tttttcgtctttattttttttcttcagcatTCCCTTAGCAAATTCAGCAA ATCTGTCCTAtggttttggtcaaattttttataaaaacttgatcttctaa aggtttttttaattCCTTAAAACACGTAAATAATTTGTTGTGATATTAAG GCTTTTAGGAGGCTACTCAAAGAATAGTTCTGATTTTTAGTGGAATCATT TTTTGTGTGTATTTGCACATTTGCTTGTTatagtaaaaagaaaattaaaa cccgtATTTCTATTAATttataaaacagaaaaatgaagcgactgcttcag tagaaattttcgtcatctttcgtgaTATTTCATCATCATAACTTGTTATA ACTTATtatgctgatgaagtcacgaaagatgacgAAGATTTCTACTTAGA GCAGTCGCtacatttttctgttttataTATGCTGCTTCTGCATTATAATC CGTATTTCTGTTAATTTAGATCATGACAGTGGATAATGGAGTATTGAAAA TAGGGGCTGACGTTCAATACCGATATGTCGATCCTATACTAACACAAACA ATACAGGACCTCGATCACTCTTTGAGAGTCAGTGGTCAGGCTTCTTTAAC TTCAATCATCTCATGTAATGATATTGCATTCGTAAAACATGAAAAGCAGC TTTTACAACAAAGACTACAGGTAAATAAACCTATCCACTCCCAACCAAGG GCATAAATTAAACttctaccatttgcttacaataaatatttttccattct cGGCGTTTCGCGAGCTTACATTTTGAGAAATCCTAtatcaaatatcattt tttaatgagcgTGACAACCACCTACGAACTACTAAAATCGGATTTGAGAT TTAGTTTTTACCatcttcgcgaaaataaatctcGCATGATTGTTTGAGAT CACTGACTCGTAAAAATTAAATCACGCAAAAATTATTCCGATTAAAATAC GTATTTTTGAAATAGAACATCCACTAGCACGTACGGTTTCAAAGATGGAT TTGAGGGAGTTTATGATTTTACTGATTGTAGCAACAATATTGaggaatac tttaatgggataaactttcgcggggattaaattttacggttgggcctatc cgcgaaattcaaaaatttcgcggggacttaatttcgcgggttgCACTATT GAgtgtcaatattttcacgattttgtgacttttactgtcaaatcatgcat tttggttgttaaaatacacatttttggcgcttctttgatgtcagtaaaca ttcaaatagtatttgtttgacatattttgagttttgtttagaaatatttc gcgcaGATGAGGCCCTTcgaaatttccattgggacttaatttcgcagatt ttcgcggatgacacccaaatccgcgaaatccgcgaaatttaatccccgcg aaagtttatcccattaaagtaatgcGTGCAATTTTGATCTGtcgttttta ttttctaaagttatataatttcaaataatttcttGGATTGTTCCACGAGA AATTGTTCAGAAAATTTGCGAAATCTCACTGACCTCTTATCAGGGCTTAA CCTATGAAAAGTGAATCGCTGTCAATTTTTCTTGAACATCTATTTTTATG CTttaaaaattcatgattttttatttttttcgtagAGTCATTTGAATAAA GTTGTGTCAGCTTGGGGTATTGAAATAGCAAGATTTGAAATGTAAGTAAA ACTATTTAAGCTGTCTCTGAAAGTTTATGTGCGTGTTTACATTGTATATA TGtcactaaaatagaaaaatgaaaatgatataaaCTGCTGGTGTAACTTA TGGCATGTCCAAAAAGGAAATAGGTTTGGCGCAAAAAAACCGCCGGGGCC TTATTCAGCATGGTCATTTATacgtcaaaagaagcgtattaggTTGTAGA CAGGTAGATTTCAGAACTGGCTGTTAATAGAccatttcataaattacgtc acgaacatcacttgccttgtatccaaacaattaccatggtgattatgtcc cttgaggcatcaaatgattttttttatgaatagaaagtagttttgataaa atccgctaggagttaatcaccatggcaataatttcaaaacgaggcaagtg atgttcgtgaagGTCTATCAATTATTACATTTTGGGATATTGGATTTTTA TTTCCGGACATGCTATAGGTTGCACGAGTGGCAACATTAGGAATTTGATT TTGTGAATTGGAGCAAAAACCCTCAACAAGGTGAAAATTTCGCGTCTAGG CAAGTCTTAGCTGCACAGgacaaataagaaaatattcatTCATCATGTCT TGTTCGGCCCTACTTACAACAACAGGCATCAACTATGTCAGCCGAGTTTG ATAGTATTCCTTTAGAAACTTTTAGTTTGAATCAGCCATTCCATAAAGTA ATAAGAAAAGACAACAagttttattctattttcagcaaaatgaatgcgga aaataaaataaaactttttgtatTTCCTTTAGAAACTGTTTactgatttt ttctgatttttttaaggATTTCACCAAACTTGAATTTTCTAAGAATGTTC TTTCGTTCGACAAAAATGTCGTGTACTGATAAAGTGCCCTCAAGTTGGCG AAATTTGTCTTTCTTCTGACTGTAGATTCTAAATCCGACTTACTTTTCAG GGAACACTCGACAGTATTGAAGGAGCGAGGTGGTATCACTCCCTCCTCtc aaaatgatgatgatgaagtcGACGGCGCTGAGATGATCATGAACCTTATC AAAAGTATACCATACAAAATGCTGTTATTTTTGTCTGGGCTATCGAACAC CTTTCGAAAATATGCCATACTAATTATCGTTATGGTATGCAgaggggttc taggtcccccagaaaatttagcccccccccctaaaaattaGGTACCCCCT GACATAAAACCTCTCAGCCCCCAGTAGAATAACCTAAGGTATNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNgggggggggggttcataccaTGGTTTGACATA CAAAATTACTGTTATTTCTTTCACATCATTTTAAGTCCATTCACGGAGAA ATTGTCACGATTTTTTGTCACAAGGGAAAAATGTCCgttaattttgaaag ttttgtatgaaaattttgtactttaaggattttttcacaaaaatattcct aatttATTTCTATATTCCTTTTTTAGGCGTTGTTTCTCCCGAAGGAAACT TGTTTTCCGGTCTCTCCATACCTCACGTTAGTCCAACAGATGTCTTACCT AACTACACATCAACACTTTCCTCAAGTACACAGAAAGTGGCCGCGCCAGC GTTACTTACTGCCGCCGAGCTATTTTCAATTGCTAAAGGAATAGTAGACG AGCCTTTGTGTCAGCAAATTAATGCagtatttcaatttcaaatacAATAT ACAGACCCAAGTACGCGGACCTGGACCGTCGACGTCAAAAATAGCCCCGG ATTCGTAATAGAAGGTCCGGTAGCAGGTTTTCCCGATGTTGTTTTTAAAC TAGAGgaacaaacttttcaaaaaatcttttacggACAATTAACGCCTCGG CAAGCTTACATGAACAGTCAGCTAACGTTCAATGGTAGCTTGGCAACTGC AATGAAATTAGAATTACTAATCAAGAGGCTAAAAGCTATGTAAATTTGAT TAATATAGAATCTTAGTTATAAAGATAATGTACATACTAGAGGATTTTTT AGttactttatttatttgatttgtcGCACTATTTCGATATTGAAGATACA CCATCTTTTACGCAGTAAAGATTTCGTTTTAGATTCTAGCCTTCATAGGA TGAAGGTCCTTCTTTTACTATTCTTGTACTATTATGCGCCCAATCGGGTT TTGTAAATAAGTAAATGCATTCGAAAAGTGGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000127TCONS_00000127Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000127-proteinTCONS_00000127-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:2597044..2606175 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
STOML1stomatin-like protein 1 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
55.33 50.75 22.91 17.22 13.12 9.78 12.87 14.23 8.55 9.01 7.54 5.99 5.1 5.79 6.4 8.95 9.54 9.16 5.48 5.15 6.9 4.95 38.43 31.78 12.46 13.55 9.79 7.62 19.55 22.41