XLOC_000065 (gene) - C. hemisphaerica

Overview
NameXLOC_000065
Unique NameXLOC_000065
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000001:2303887..2314933+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000065 ID=XLOC_000065|Name=XLOC_000065|organism=Clytia hemisphaerica|type=gene|length=11047bp|location=Sequence derived from alignment at sc0000001:2303887..2314933+ (Clytia hemisphaerica)
TTTTAGTGTACTGACAGAATAATaacaaataaaagcaaaatttccaattt tggaaaatttagatTTGTTATGAAGAAAAGGAAGTCCACTTTGTAAACAT TGGTGAGAGTCTGGgtgaataaaaaaagaatatatttggGATATTGTTAT TCAAAATGACTGATTTCAAATACCTTGGATTTATATTGTTAACAATCTTT ATACTATGGTTGCCTTTTGGTCAAGCAAGCAATGAAGTATATAATTACCG TCAGCTACGGGAATCTGACTTCCAAGGAATAGCTGATAAAATTCATACAA AAATCCGTGATTATGCTAAAAAGACTTTACAAGCTGAGAAAATTGAAGAA CAATTGAAGAAATTGAATTACATTGTTAAAACTGTAGATGGTCAAACATT AGAAACGGATTTCTCAGCTGGTCTTGAATCGGTTTTTAAcggaaaacaaa aaatcttggaaaatATTAAACATAAGGCTGAAAAAGCTGAAATGGATTAT AATTATGATCAAACATTTGACGAAGAGCATGCTTATTTTAATATGCGTGA TATCAAAACACAATACAATGAAAATCAATCTCTGGTAATTGTACCCAAAT TTTCAGATAATGTTCGTGTTAATTTCACGCATAGCTTTGTACAAGTACCG ACGAACGTGTACGCGTACAAAAAGTCCGTTTTAGATCAGGTAACATGGGG AGCTGAATTGGATGAAACATTTGAAGGCAATTTTAAGAACTCGAGTGGAT CGCTGTTGTATCAATACTTTGGAGATGCTTCTACAGGTATGGgagatttc actttttgatcaatttttatATATCGTGACTTTTTGGCATGTTTATACTC ACAAGATTTGAGTCGTTTAAGGGGATTCAGAACATTtagtcaaatttcga aaaacgtaCTTTTAGTGTCAAAACATTTTACCGACCTATAGGAGTATGCT CTGAagatttaaagtaaaaatatcaacttgaAGGCTAGATGCGAGCTTTT AANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNAAAGGCTGACAAGGTGCGGGAAAACCCCCTAAAACGTG TTTTGAGAAAACGGCGCAGAAAGTTAAAAATAgaggtttttctcaatttt tctgcgatacatagaccgatttacaaaatttttgctgtggttgaccaaaa tggattgacacatttacttttaatgttgaaaaggtactggaaatactaaa atagtccaagttttttgaaaaaaatggccttCCACGTGCTCCGGGAATCT CCAAGTATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNTCTCAAATCTGTTTATATCATTTACAGTTGAATTTCAGTGTTGAT CTTAGGGAAACGTGTCTTCAGGTTGAACGTCAATCATGCATAGTTTTACT CAATTTCCCAGGATCGCCTCCTGGCGCCATGAAGTGCCACGATTCATCaa agactagatttccactggaTTTAAGACTCATAatggatacatcattgaat gtGTTTAGTTCCTTGTTTCAAACTTTATTCATACCATGGTTCANNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNAAATACCAGTTCTTcggttaccatctttaattacgt CATATTTAGAAATCCCGGGgaaaaaaggcggtattgactTAGACGCCCAA AAAGGGCGTAAAGAGAGCTTTCGTTTGGTATGTCATGATGCTATGTTTAG AGCAGCCATACGGAAATGAGGCCCTAGCAACGGATGCGATTTACCGTTGC TAAGGAGAAAATTGTATACCAGGGCTCATAAGAAACCCTATATATCGGCA GATATTTATGCTACGGCCTTGAAATTTTCAGGGTATGTTCAGGAAggata aaggatactaaaaagccttaaatcccgaaattgataaatttttcaccaat tttcaaaatctcatatgactacccccttaaaGTTTATGGGGTAAATTTTT AGTCTTTTAGCAACCGTCCTACAAATACTGTTGGGGAAGTCTAATGAGTG CATCACATGTTGAATTTTTTGAGAATAAAACTTGTGATTAAACTGCTTCA AACATGTTAGAAGCTCTTGTATTACCCATGACATCAAAATTActttatta acaagaaaactgGTACCATTGGAAAACCCTGCGTGACAGAGATGCACTTT GTttacatgacatgacatgaggCCCCCATGCGGTTTTCATGATGACGTGA TAGGAACTTTTTTGCAACGTGATTAAGTGATTGGAAATTATCTTTTcgtt attgggcttttccagaaaaaaaccgtacacccTCTGTTGAGGAGCTCCAA TCTTTTGTGAACCACCCCCTTTGAATTCCAgacaattttaggatcatacc cctctagaattctgaatttttacagattttcaatcattacccctatggaa aaccacttatttttggcggatttttgtctactgctatggaattccactgc atttcaaaccatacccccttggaatggaaatggacctcctcaacaggggg tgcacggttcttttctggaaaagcccattgcacAATGAGAGGTCAAAAca tgatcgtgatttgaaaggttCTTAAGCCGTGATACGTAATTTGAACTTTG TCAAAAGGAtacgtgatcagagttaccgctaGGGGGCCTCCTATAGTGAA TATTATGTTACCTTAGCTGTCTTTTAAGGGTATTATTACCTGAATAATAT GTTACTTTCGATATATTCCAGGTATCTTCCGCATCTTTCCTGGAAACATT ATGGGAGTGAAAGAAGATGAACATAAAACGGATTTGTACGATTGTCGGCG ACGTGTGTGGTATATCCAAGCAGCTGCTAGTGCAAAAGATATCGTCATTG TCCTCGATCTTTCTGGTTCTATGATCGGAAATAATATTGGTAAGTATAAC agacatttgaaaattgaagagGATGATATACTTTCtcttataccttatcg gggaaaacttcgtcagggaaaattttcgtcggggaaaaatattcgtcact tggccgaaatttcgtcacttttccccgacgaagttttccccgataccCTT Atcgcgtaatgggtaatcaggaccactgtgcgctaatgacgacttactat tggtccaaagttttgaaaaattttgaagatttttgcgtctagccaacggg aGGCCATTAAAGAGGTGCAATCAGTCCttattacccatgatccatttcga ctgtgaaatggcctataatACGGAGTGTTTCAAGTAAGTGAATTGCAATA AATATGAGTGGTTCGTAAAACTAATTAAAAGGGGTTTTAGCCAATTTCGT AGCCAGACCCACTcgcaccactttttgattttcctgtTGGACGTGATACA ATCATTTTACAAACCTTTTGTGAACGCTATCATAATCATCAAAAAAGCGA GCTAAGGGACTGCGACGAGTTTGGTTTTAAGCAAGTCTgcaaattttatt tatattctaATTCTCAAATTCTTCTTCCAAGTTATgaaggaacaaaacaa aatctgtttttctgtttttctgctTTTGGTTCGAGGAAAATGAGATTCTT TTTCACTTTTATAAAGAATGATGAAGGCGTTCTTTATATGAACGGGTAGA GGATCCGGTAAAATGTATAGTATAAATGCAGGCCCACGGGCTTTGATAAA GCTTAAAGCTTTAGGTTATCCTTCTTTATAGCCTGTAACAAACTCTTCTT TgctgactgaaaagataacgccaagtttttttaaatataaaaaacgcCCG TGGGCAGGGTGGTACAGGCAATCTTCTTCATTGATTTCACCTTTTGTGTT TCCAGGTATTGCAAAGATTGCTATCTCATCTTTGATTGACACATTACAAG agaatgattattttaatgtcatCACCATCAACACTGAAGTCAAATACATT GTCCCATGTATCAAATATTTGATCCAAGCCaccaaagaaaataaagaaat gatgAAAAGGTACAAACAATTTCTTTCTAACTTCAACCTTGCTCAACCCC ACTAGGTAAACTAAAACTTCGAAAAAATCCCCACTGGCATATACCTTATA TAATAATCGCATCACCATCTTTGAGGCCTGTATATATCTCCGGGGAGCCA CTCGAGGTAATAACCTACCGTACGTATTTTACTAAATAtcctctgcactg taagggtccgatttcaaaggcatATTTTTGGTtgcacgtacggtcgtttt taaATCAAGTGCCCCCGGGTGTATATCTAACACGATATTGAACACTGTTG TTGATCAAGGTCCATCCAATGTGATGAGGGCGTCATAAATGTCTGTGAGT TGACGTTGCTTTGATATTTCGCCGAAATTTTTACGGATGAATGAGGAGAT TTACACTATGTACTTTATTTGCCACTTCATTCCATTCTTCTCCACTCCAT TACTTTTCTCACATGTCTTGACTTAAAGGCGCTtaaaatcagaaatttga caCCCCCCgtccatttttcttttcttccaaCAGGGTAGTACAAAATCTCA CGGAGGCAGCCGAAATTGTGGATGTCAACAAAGGCATGGACGAAGCATTT AAGATACTAAATATCGGTGAGTTCTGGACTTATACTAGGGATTtcttttg cttatttttttacaGTATTCAAAATCTAATACAAGTTTTGGTAGCATATA ACAAATTATTAGATCTATTTTCCACTATAGGAGAGCcagattttttaaac aattaaaGTTAGCAGAGTAACAAtgaaattgatcatttttttaaacatta tttcCTTGACCTCCAAAaatattggttcttcttacaagaaaagtGTTATA TAATGTATATGCTGTGTgtatgaaatatataaataactaaCAACTCGAAC AGATACGGGAAGAAGGACTTCATCGGAAGGAGTAAGGAAAACTAAATGAC GCTCGGAATCAGAATACTGAGATATGTCGTACATTTTTCACATTGTAGGT CCTTCAATCAATCGTACATCTGCTGGTTGCAACAAAGCCATCATGTTCGT TACTGACGGGATAGAAGGAACTTACGCCGGACAAGAATCATTCGAGAAAA ACAACCCAAATAAAGATGTACGGGTATTCTCATACCTTGTCGGCCGAATC AAAAACCCGAACGAGAAAGCACTGAAAAAGATGTCGTGTGAAAATAATgg ttttttctataaaatcgaAACATTAGGAAATATATGGGATACCGTTCTGG ATTATATTCGGGTTATGAGTCGCCCGTTAATCCCGAATTTAAAAGACAGT GGTCGGAAAGAACTCAAGCCAACATATACACCAGCATACCTGGATAGTGC TGGTTTTGGCATGGTTATGACAATCTCTTTAAgcgttttcaagaaaataa gtTATATTCATAATGAAGACCCAAATGACGTCAGATATTTGTATGAAGGT TTCTTAGGTGTAGCTGGTACAGACATATCTTTGAAGAATTTGAAGGACCA AGTTGATCAATCCAAACTTGGTGTTTTTAGTCGTGGTTTTGTTATCAATA AcaatggttttgttttgattcatcCGAAATTCCGTGACCAGTCTGGCTAT CTTCCTGTTCCCCCAAATGTCCTTATCGATGAGTTAGAATCAGCTCAGGA TCAAGAAGATACGAGTGCACTAAAGAAGCAAATGTTGAAATTAACGGCTG ATGACCTTGAAGGTGGTCCTGTCGAATTCATTACCCGGTCAACTTATGAT GATGGTCGAAAAGTGTATTCAGGCAAAACAAAATATTGGTATAAATTGCT TCCTGATGCTGATTTGGTTTCCGCCCTTGCATTGGATGAGATTGATAATA CTTACTTAGCTGTTGATGAATCGACACTCGAATTAAAGGCGATCAAGGAA AAAGGTATCAAACATTTTAATCCATATCTGAGAGTGTGAGAACTCAATCT TGAAActataaattttttgaggcCATAATACCATCTGCTAACTTCTGTTA CAATTTGAcattaaaacttttttcacatgcacgtaaaatctTCCTTAAGA CCTTACGGAGAATCGTTCGTAAGACTGTCTTTTGGGAAATTCCCCGATAT TACGTagagtttttattgataaagAGGGTCTTACttgacttttccttccg ttcaaaacaATACGTAAGCTTGGGTAAATTTCCTATTCCTGAAGGTGTTA AGTAAAATAATAAAAGGTGATAAAAGGAAGAGATGCGGTAAATTCTCGCT CATTCCGATTTCTATCATTCtaatatttctataattcgaacttgtttcaa GTCAAGAAGAAGCTCTCTTAAAAAACTTTCTAtagttcgaatctctctgt tattcgaactgACACGATTCCCGCGTTTGAGTTTGACTTAACGAAATTCA ACAGAATACAAATTGCTTTTAATACCAAATTCTTTCTTTTCTACAGGAAT CGAAGCCTTAAAGCCACCAGTCGATGACTTTGACTATGATTATTGGAATT TGACAAAAACCAACACGTCATTTGTTACAATTGCACCATGGAATTATTGC AACTTACCCGAATCATTACATAATAAACCACTTGGTATGAAATTCTACCC AACGGTTGGCGAGATCTACACATTCATGAGTAAAAATCCAACTGATTATG AAAAGCATTGTAAAGATAAAGAGTTGGTAACTCGGCTTTTAGCAATGGCT GGTGTAACGAGTGAAACTGTGGATAAAATTTGGAGTCAATTCCAGTTTGA TGAAGACCCTGATATGATTCAAGGAGCTTTCTTTGCAACCTCCAGTGgat atcaaaaatatttgtctTACCATAATCACACAGATCCTTCACCGCCCTTC AATCGTGATATTTTACGGACCAAAGTATTTGAGACTCCAATCACAAACCC GGATATTAATCTCTTTTTATCATCGTCAGCGCGTGACAAGACTGTAGGAC CAGTAAAGATCTCAATCATGCATCCTTTTTGGAAGCAAAAGAACATTGCA GCAGGTaatattctttttttgattctttttcttcCACCAAAGATCAAAAC GcacagctggcacacaacattgtacCAACGTCAATCCAACGTTCATAAGA CATCCAGACGAGCCTGGATGAGCGTTGACTTAACGTTACGTTGGCATGAT ACCTcctctcacagacccggtggaaagAGTTGCTAAAATTCCGTCCAcag tgaaaaattatactctaatttttgtcccctcttagaataatcaaataaac aaatccccactgcaaaatattttgcgattttttcaTCCCCTTTGAATTTT CTAACCTAAAAACAATGGCTGTAAAAAGTCTACCGGGTCTGTAAGGGGGT GTAAAATGTATCGCCAATAGAAgataaatttagaaatttgttttcaTGGT AGAAAggaaggaagaaaatttggcacAGACCTTCAAACATAGGAAGCGGA GTTTGTAGTCGACTTTGTAGAGACTTTattcctaaaaataaaacatttct atgattttaaaattttttgcaatttttttattttagtaaccGGTATTGAA ATCAACAGTCAACTCATTTACAATTACTTAATGGaatcggcagaaataaa aatgaCTGAATTCAGTACATTAGCTATCTGTAAAGATACTGAGAACGCTT TTTGTGGTGTCATTGACGAACATGGATACATCATCACTAGCAACCAAGGA GAGGCTTACACAGGACAATTTATCGGGGAACGCTTAGGAGAAATAGTCGA TGCTCTACCGTTCTTTACCAAAATTGAGCTTGAAGATGCACAAGCAGAGT GTCCGCTATCAGACGAAGTTTCCGCCGCAAATATTTTGCTGACGCCTGCA AAATTAATTTTCGGTTTTATTACCGGGCTTTGTAAAACATGTTATTGGTT GGTTATTCAATTTggtattgttttgatttcattgtTTGAGCATGCGCAAA GAGTTTATGCGGAAGTACCAAAAACAATACGGGTAAGTTGTACCAAAACA ATGCCGTTTTACCAATTCGATATGAGTAAaatccagaatggaaaaatatt cCAGGAAACGTATAAATGTGAAGATTGTTCGGATAAAACAAAGGACTTTA AATTAATTCGAATCAATGATACTAATACAATGCTATTGATGGCTGAAGCA GACTCTAATTGTTGTTATAAGAAGCGAGTTAGTATGAATCACGTTAAAAA AGACTCGACCATTGATTGGTGTAATCCGCCCGAGCAACCGTACAGGCGGT CGCCCGCTGTTTGTTTGAACGATACGACTTCAAAACCGGAGAATGCTAAA TGTGGCTCTGGATTTGTtgaaaaaccatcaattttGGTTTTAACGATAGC TTTTATGTTAGTGTGTTTCGTTTTTGGATAAACCAAAGTTAAGCATCCAT GTGCATAGTTATTGAGAAAAATatggaatatttttataaatgtggAATTT CGCTGACTTCTGGCTTAGTCAGTAGTAACTCAATCACTGCAAACGTTTTT GTTGAGAAAATGGCTTTAATTATAAGGAACTTTTGAAATAATGATGAAGT ATCTTAAAATTTGCGGAAAAATTTGCGTTATAAATGATATATTACATTTC CGTAAAAAATGTTTCCGTACGTTTCTAAAAGATGGCAAAATAATCTGAGT AAAATAACAGAGTTGTGGAGTTACACATTTCAAAGCTTGGGCAAAAACAC ATCCATCGCATATCAAGAGGATTTTCTTGGttatttttgagttattttac CTTAAAAGACACTAGTTTCTAGCAATGAGGAATGAAATTTTGGGCAACTA CAATTATAATTTCCTTAAAGcaatatccaaaaattttcaaatttacaatA TAAGAATGTACTCTATAAGAATAATCAAAATGAAATCAGATATATTTCAA ATTTAGGTCCAATTTGGATCCTTATCTAAGTAAGAATACCTGAAGAATAT TTAAGGATAATTTTTCCCaaaagagttaaaaatttcaataatgaAATGGA GAAAGAtcattcttatgaaaaagcgtgtatgtgcAAAATGGAATAACTAT AGCGAAGGTGCCTCATTGCatgaaacaaaggaaaaataTCAACCTATTTG GACGTCCAAATAACGTCGTTTCTACGTTAcattaaatttctaaaaagaag gataatttaaaaacaatgttGATCCCTTGAATGTGCTTTAAACAAATTAC GGCTTATATTAATAGAAATAGTGTGATAAACCTGTAGTATTTAAGTTTTA CCAAAGAAATAAGAACGAGGACAATTTTACTCTCAGAAGTGCGACAAAAG AGCAGCTGagcctcatcaaaaatttactggttcttataaaaaagggtgtA TAATACAAGGGCTTGCAAATGTCTGGTTTTCCTGTATAATTACGCACTGC TGAGAAATCTTCATTCATACAATAGagctttatatatttttgtttacata cttactatataattattttatattattgtatttaatttttttttttttga agctatAAAAATTGATATTTACCCTAAGAGGTAGTTTCGATCCCAAGAAT AGACCATTTTAACTTCTTCTAGGTGTGACAAAAAGCTTACCTAACTAAAA ATTAACAACACCAAATTTTAACCCAGTACAGAGTTTTGAGTGAGGCCCGG GTAAAATGAAATTATATTCTTTATCCGGTCGAAATTCGGAGATTGATTGT TTCTGCCCCGATCAATACAGCAATGGTATTACGCGTTTTTTTGTAAGagc atccaaaacttttgaagcccttagatgttcttaactttttggatttc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000119TCONS_00000119Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000119-proteinTCONS_00000119-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:2303887..2314933 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.74 2.34 0.51 0.43 10.17 6.81 14.42 15.22 6.83 9.19 7.1 5.42 20.06 15.87 0.92 1.11 7.2 5.6 19.29 22.4 9.36 9.43 6.94 8.24 8.89 11.46 2.14 1.93 2.32 2.64