TCONS_00000119-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000119-protein
Unique NameTCONS_00000119-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1114

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000119-protein ID=TCONS_00000119-protein|Name=TCONS_00000119-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1114bp
MTDFKYLGFILLTIFILWLPFGQASNEVYNYRQLRESDFQGIADKIHTKI
RDYAKKTLQAEKIEEQLKKLNYIVKTVDGQTLETDFSAGLESVFNGKQKI
LENIKHKAEKAEMDYNYDQTFDEEHAYFNMRDIKTQYNENQSLVIVPKFS
DNVRVNFTHSFVQVPTNVYAYKKSVLDQVTWGAELDETFEGNFKNSSGSL
LYQYFGDASTGIFRIFPGNIMGVKEDEHKTDLYDCRRRVWYIQAAASAKD
IVIVLDLSGSMIGNNIGIAKIAISSLIDTLQENDYFNVITINTEVKYIVP
CIKYLIQATKENKEMMKRVVQNLTEAAEIVDVNKGMDEAFKILNIGPSIN
RTSAGCNKAIMFVTDGIEGTYAGQESFEKNNPNKDVRVFSYLVGRIKNPN
EKALKKMSCENNGFFYKIETLGNIWDTVLDYIRVMSRPLIPNLKDSGRKE
LKPTYTPAYLDSAGFGMVMTISLSVFKKISYIHNEDPNDVRYLYEGFLGV
AGTDISLKNLKDQVDQSKLGVFSRGFVINNNGFVLIHPKFRDQSGYLPVP
PNVLIDELESAQDQEDTSALKKQMLKLTADDLEGGPVEFITRSTYDDGRK
VYSGKTKYWYKLLPDADLVSALALDEIDNTYLAVDESTLELKAIKEKGIE
ALKPPVDDFDYDYWNLTKTNTSFVTIAPWNYCNLPESLHNKPLGMKFYPT
VGEIYTFMSKNPTDYEKHCKDKELVTRLLAMAGVTSETVDKIWSQFQFDE
DPDMIQGAFFATSSGYQKYLSYHNHTDPSPPFNRDILRTKVFETPITNPD
INLFLSSSARDKTVGPVKISIMHPFWKQKNIAAVTGIEINSQLIYNYLME
SAEIKMTEFSTLAICKDTENAFCGVIDEHGYIITSNQGEAYTGQFIGERL
GEIVDALPFFTKIELEDAQAECPLSDEVSAANILLTPAKLIFGFITGLCK
TCYWLVIQFGIVLISLFEHAQRVYAEVPKTIRVSCTKTMPFYQFDMSKIQ
NGKIFQETYKCEDCSDKTKDFKLIRINDTNTMLLMAEADSNCCYKKRVSM
NHVKKDSTIDWCNPPEQPYRRSPAVCLNDTTSKPENAKCGSGFVEKPSIL
VLTIAFMLVCFVFG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000065XLOC_000065Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000119TCONS_00000119Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
IPR013680VDCC_a2/dsu
IPR013608VWA_N
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 306..326
NoneNo IPR availableGENE3D3.30.450.20coord: 459..629
e-value: 1.2E-10
score: 40.9
coord: 808..933
e-value: 0.028
score: 13.8
IPR002035von Willebrand factor, type ASMARTSM00327VWA_4coord: 248..432
e-value: 1.7E-14
score: 64.2
IPR002035von Willebrand factor, type APFAMPF00092VWAcoord: 250..423
e-value: 7.9E-15
score: 55.5
IPR002035von Willebrand factor, type AGENE3D3.40.50.410coord: 244..436
e-value: 4.9E-21
score: 75.0
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 250..432
score: 14.972
IPR002035von Willebrand factor, type ASUPERFAMILY53300vWA-likecoord: 249..432
IPR013680Voltage-dependent calcium channel, alpha-2/delta subunit, conserved regionPFAMPF08473VGCC_alpha2coord: 672..1090
e-value: 3.8E-19
score: 68.7
IPR013608VWA N-terminalPFAMPF08399VWA_Ncoord: 108..218
e-value: 8.6E-18
score: 64.9

Blast
BLAST of TCONS_00000119-protein vs. Swiss-Prot (Human)
Match: CA2D3 (Voltage-dependent calcium channel subunit alpha-2/delta-3 OS=Homo sapiens GN=CACNA2D3 PE=1 SV=1)

HSP 1 Score: 323.939 bits (829), Expect = 8.429e-94
Identity = 313/1131 (27.67%), Postives = 508/1131 (44.92%), Query Frame = 0
Query:   33 QLRESDFQGIADKIHTKIRDYAKKTLQAEKIEEQLKKLNYIVKTVDGQTLETDFSAGLESVFNGKQKILENIKHKAEKAEMDYNYDQTFDEEHAYFNM-----RDIKTQYNE-NQSLVIVPK-FSDNVRVNFTHSFVQVPTNVYAYKKSVLDQVTWGAELDETFEGNFKNSSGSLLYQYFGDASTGIFRIFPGNIMGVKEDEHKTDLYDCRRRVWYIQAAASAKDIVIVLDLSGSMIGNNIGIAKIAISSLIDTLQENDYFNVITINTEVKYIVPCIK-YLIQATKENKEMMKRVVQNLTEAAEIVDVNKGMDEAFKILNIGPSINRTSAG--CNKAIMFVTDGIEGTYAGQESFEKNN-PNKDVRVFSYLVGRIKNPNEKALKKMSCENNGFFYKIETLGNIWDTVLDYIRVMSRPLIPNLKDSGRKELKPTYTPAYLDSA-----------GFGMVMTISLSVFKKISYIHNEDPNDVRYLYEG-FLGVAGTDISLKNLKDQVDQSKLGVFSRGFVINNNGFVLIHPKFR--DQSGYLPVPPNVLIDELESAQDQEDTSALKKQMLKLTADDLEGGPVEFITRSTYDDGRKVYSGKTKYWYKLLPDADLVSALALDEIDNTYLAVDESTLELKAIKEKGIEALKPPVDDFDYDYWNLTKTNTSFVTIA-PWNYCNL---PESLHNKPL-GMKFYPTVGEIYTFMSKNPTDYEKHCKDKELVTRLLAMAGVTSETVDKIWSQFQFDEDPDMIQG---AFFATSSGYQKYLSYHNHTDPSPPFNRDILRTKVFETPITNPDINLFLSSSARDK----------TVGPV--------KISIMHPFWKQKNIAAVTGIEINSQLIYNYLMESAEIKMTEFSTLAICKDTENAFCGVIDEHGYIITSNQGEAYTGQFIGERLGEIVDAL---PFFTKIELEDAQAECPLSDEVS-AANILLTPAKLIFGFITGLCKTCYWLVIQFGIVLISLFEHAQRVYAEVPKTIRVSCTKTMPFYQFDMS-KIQNGKIFQETYKCEDCSDKTKDFKLIRINDTNTMLLMAEADSNCCYKKRVSMN--HVKKDSTIDWCNPPEQPYRRSPAVCLNDTTSKPENAK-CGSGFVEKPSILVLTI 1104
            +L  S F G    I  K   Y+   L  +K +E  K +   ++ +DG  L    +  +E +F+ K + +  +   AE+A + + +D   D ++ YFN      RD    + E  +  ++ P    +N+ VN + S VQVPTN+Y    ++++ V W   L++ F  NF +   SL++QYFG A  G FR +PG  +  + DE+    +DCR R WYIQAA S KD+VI++D+SGSM G  + IAK  +SS++DTL ++D+FN+I  N E+ Y+ PC+   L+QA + NKE  +  +  L  A  I  ++  ++EAF IL+     N T  G  C++AIM +TDG   TY     F K N P++ VR+F+YL+GR +      LK M+C N GFF +I TL ++ + V++Y+ V+SRP + +      +E    +T AY+DS            G  ++ T+++ VF K         N+ R   +G  LGV GTD+ +K L   + + KLG+    F I NNG++L HP+ R   + G     PN    +L   + ++    L+  M+     + + G      + T D G++V      Y+Y  +        +AL      Y      T+      E+G+  L+ P                  V++A  W+YCN    PE  H   L  +K Y           K P      C DKEL+  +L  A V S  ++  W+    ++  +  +G   AF  T +G  +   +      +   N+D L+    E         L+   +A             + GPV          SI     ++  + A  GI++  +        ++    +     +I  D E   C +ID +G+I+ S +    TG F GE  G +++ L     F +I L D QA C  + E S  A+ LL P       +  +       +++F   L S +       A+  K     C    P +  + + K   G I      CEDCS   K F + +I  +N  +++ ++   C     ++M    ++ + ++       Q  RR P  C        ENA+ CG      PS+   T+
Sbjct:   43 KLWASAFGGEIKSIAAK---YSGSQLLQKKYKEYEKDV--AIEEIDGLQLVKKLAKNMEEMFHKKSEAVRRLVEAAEEAHLKHEFDA--DLQYEYFNAVLINERDKDGNFLELGKEFILAPNDHFNNLPVNISLSDVQVPTNMYNKDPAIVNGVYWSESLNKVFVDNF-DRDPSLIWQYFGSAK-GFFRQYPG--IKWEPDENGVIAFDCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIAKQTVSSILDTLGDDDFFNIIAYNEELHYVEPCLNGTLVQADRTNKEHFREHLDKLF-AKGIGMLDIALNEAFNILS---DFNHTGQGSICSQAIMLITDGAVDTY--DTIFAKYNWPDRKVRIFTYLIGR-EAAFADNLKWMACANKGFFTQISTLADVQENVMEYLHVLSRPKVID------QEHDVVWTEAYIDSTLPQAQKLTDDQGPVLMTTVAMPVFSK--------QNETR--SKGILLGVVGTDVPVKELLKTIPKYKLGIHGYAFAITNNGYILTHPELRLLYEEGKKRRKPNYSSVDLSEVEWEDRDDVLRNAMV-----NRKTGKFSMEVKKTVDKGKRVLVMTNDYYYTDIKGTPFSLGVALSRGHGKYFFRGNVTI------EEGLHDLEHPD-----------------VSLADEWSYCNTDLHPEHRHLSQLEAIKLY--------LKGKEPL---LQC-DKELIQEVLFDA-VVSAPIEAYWTSLALNKSENSDKGVEVAFLGTRTGLSRINLFVGAEQLT---NQDFLKAGDKENIFNADHFPLWYRRAAEQIPGSFVYSIPFSTGPVNKSNVVTASTSIQLLDERKSPVVAAVGIQMKLEFFQRKFWTASRQCASLDGKCSISCDDETVNCYLIDNNGFILVS-EDYTQTGDFFGEIEGAVMNKLLTMGSFKRITLYDYQAMCRANKESSDGAHGLLDPYNAFLSAVKWIMTELVLFLVEFN--LCSWWHSDMTAKAQKLKQTLEPCDTEYPAFVSERTIKETTGNI-----ACEDCS---KSFVIQQIPSSNLFMVVVDSSCLCESVAPITMAPIEIRYNESLKCERLKAQKIRRRPESC--HGFHPEENARECGGA----PSLQAQTV 1078          
The following BLAST results are available for this feature:
BLAST of TCONS_00000119-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CA2D38.429e-9427.67Voltage-dependent calcium channel subunit alpha-2/... [more]
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