XLOC_000063 (gene) - C. hemisphaerica

Overview
NameXLOC_000063
Unique NameXLOC_000063
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000001:2202192..2206120+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000063 ID=XLOC_000063|Name=XLOC_000063|organism=Clytia hemisphaerica|type=gene|length=3929bp|location=Sequence derived from alignment at sc0000001:2202192..2206120+ (Clytia hemisphaerica)
GGCATTTTGTAGTTcattgaaaaggtaaaatattttGTCCTAATATTCCt
tatcaattttgaaaattgaaactttccaGGTGAAGATGTGGGATGCATTC
TTTGCCCATAGTATAGACAAAGCGGTGACAAAATACCGGAAAGCGGTGAA
TACTTCATGAAATACCGGCGTACTGGACAGAAAATTCTCAGATTCTGTTC
AAAAGTCTTTTTAACAAGTTCTGGAATACCATTTTCCCGTCAAATACCGA
AATGAGGATTATACCGAAATCTTGGAAGTCCCCCTGTGTAGATCAAAGAT
AAAAAGGGATATTATCTTCGTATGTATTTCATTTGCAGTTTAACAATGAA
GACATTGACTGTTGTACTCCTTTTGGGCATCGTTGCTGCAATTCAATGTC
ACGCTGTTTCATCACCAGGTGCAGATGATAATGACCATGACAAATTCAAC
GAAAAACACAACTGTAAGATTTGCGTTATTGGACTTTTCCTAATTTCCTA
CCCATTCATTCTTTTGGTCGGTTGAATGACCGAGAGGTGTCATTTGGGCT
CAGTACAAAATTGTAGTTATATCCCTTGACTGCTAAAAATACCTTTACAA
AGGCCTACGGGGTATCCAAAAACTACTTTTCGGGGTAACCATTGAAGCCC
GGGGTACTCTAGGTGATGCGAGGCCCTCTAGGGTATGTTTTTCAGCCTTC
TCAAAGTGAAATCTAAAGGGccaaaagtacccaaaaagcgCAATGTTAGG
GTGTAAAGTGAGATAAACGATGTTTTTTGGGTTAACTTTAATCAATCAAA
CGAGGTGAATAATATAATAGAGGGATCCAATTTTGAGACCCTAATTCTGT
CCGTTCAGATCGAATGCCCTTGGGAATAAATAGCTCTTGTATAAGAATAA
GAATGAAGACATTGAATGAAGTGAATACAATCGGgctcatgttgtcttct
gaccagccaccagaaccgttggaaaaccaacggatccggcgaaactcgaa
ctcacaaccatgctATTCGCAGACATTTGCTCTATCATTGAGCTACGGAT
CCCATATACCAATATATCAACATTCTTATCTTTTTAATCAGCTGTTGATC
ATCACCAACACATCATTGAAGAAGTACACACAGAACGTGGAACAGCAGGT
GCGACATCAGAATACTCTGCTACTTACATGGCTGAAAAAGGATTCCAAAA
GAACTACGCTTACGGATGGAAAACAAAGAACAATTATGGTCATATGCCAG
AAATGATTTGGTATAAATTCCGTGAACCATTTGTTCCAGCTGAAGTGACA
TTCAGATCCAACGGTAAGCTTTTTTTTCAACCTCGTTTATAAGCGCTAAA
ATANTCATTTGTTCCAGCTGAAGTGACCTTCAGATCCAACGGTGAGcttt
ttacaataaaatttgCCTTTATTGTATTCATATAACAAACAGTCTAGGAA
ACATAAAAACCCATCCACAATAAAttataaaaacgaaagtggtctcttct
accaTGAAAAATTCTAGAATGTGTAAGAACGAAGCTATAGCTATAGCAGC
TATAGCCTAAAACTGAGTTTGTTTTCATCTTCAGAGATAAGTGCTCAATG
TTCTTATCTAAGACACAAAGTCTTATTATGATAAGACTTATATGATAAGG
GGTGGACACTCAAGGTGAAAGGCCTACCGTACGTGCAACCCTTAAGGATC
CTCTTTCTAAGCTTTCTAAAGCGAACTGTAAGGGTCAAAATGAGCAAAGC
TGCgaaaaagtgcactctaagggtgtaaaatttggaaaatgtgACATGTC
ATACTTTGCCTTAAAATGCTCAAAATTTTTAGAGAAATTGAATcaataag
ggtcgattttttgtTCAAGTTTACTCAAATATTACTACAATGAAGTGAAT
AGagtcgctctcatgttgtcttctgaccagccaccagaacgcgttggaaa
accaacggatccggcgaaactcaaactcacaaccatgccattcgcgggTA
TTTGCTCTACCATTAAGCTAcggtaataataataatacaatATTCATGAT
CAAATTTtactaaattttctctgcactgtaagggtttaaTTTCAAAGGCA
TAACTTTAGGCCATACAATCAGTCGTTTTTAAATAGAGTGATAGACTACC
AAAGTCTTTTCTATCACTTTTTAAGGAAATGTCAACGAGATGCCGACCAA
ATACCAATTCGTTGGTTCCAACGATCACCACTGCAATGAATATTCTCCAT
GGACCATCTTGTGCGAAGACTTGTCTGGAGATGTAGTCAAATACAGGTAC
GAGCAATATAATATGATAACAAAAGGCTAAAAGTGATTTTCAGTCTTTCC
AAGGCAGGAGAAAGTGAATTTGTTCATTATTCTATATATTTAATTTAATA
TGATCTCAAAGGGCTAAAAGTGattctttaatttttccaagGCAGAAGAA
AgtgaatttcttcattttctgaaaagcTTCCCTGCTCCTCTTTTTGGATT
TAAGAATCATTTAACAATAAATTGAGAGTGCAATTAAAAAACCGATAGCA
TTGTTTTAGTGCATTGATGCTTTTCCCATCAGTAAGGGATTCCAAcgcag
ctggcacacaacgttgttttaacgttcaaataacgttatttgaacgttat
gaatgtcacatggacgttgttttgacgttgtgtgccgtctggaAGGGGTC
TGTGATAAGCGAGTGTTAATCATTTCCGGATGTACAATTGTTATACAGTG
AGCTCTTGccaattcgaacttctattatttgaatcattctataattcgaa
ataATTCGTAAATCCGCCATCAAAGGGAAACGTAAAAATGCTTTCTTTAA
TTTGAATCCTTcgttaattcgaacaaattacaCTTCCGGTTCGACTTCTA
ATaaactattattatccatataatatcattaagtaagccattaaagataC
CGGTTACtctttcgaagcgggctacacggctttttgcgcaatgcaattgg
ttcttttcgcatgacgacgagcctacattgtccagagttgcccgtcgtta
ggaaaattcattgtgacgtcactttttcaaaggaaaacgaGCAATGcgtg
acatcatttctctcatttttttcaatattgccctcggtcaacgcaacaac
ctcgcaaactcggtcgttacttgacctcgggcaatatttctcagtacata
GCCCTCataaaccggtcattattgtattattgttaaccggttactttttc
gaagcgggctacacgactttttgtgtaatgcaattggttcttttcgcatg
acgacgggcctacactggccagagttgcccgtcgttaggaaaattcattg
tgacgtcactttttcaaaggaaaataaaCAANTACACTggccagagttgc
ccgtcgttaggaaaattcattgtgacgtcactttttcaaaggaaaatgaa
caatgcgtcctcgcaagctcggtcgttacttgacctcgggcaatatttct
cagtacagccctcataaaccggtcattattgtattagagtTATACTGTAA
TATTATTCACTTTACAGATACGAGAGCAAAAGATGTGCTGTCAGTCATTA
CCACCAGGCTACATACTTCTGTTTTGGATTGAGAGTCTTGAACACCAAAG
GCAACACTGCTTATGCTGGTGTCGGGAATGTCAGATTCTTTAAAAGATAC
GATTCTGCTCATATGTAAATTCATCATTAGAATCTTCTCATGTTCTGTAT
TGATTTATTTACATACATTATAAATTTCaagcaagaaaatttttgaaaat
ttctttaaatgtCTTTTTGTTTTAATATACCACACTttgtgaaattttat
ttttacgaTATTGTTGAAAATACAACCAAAATAtcgacaaaaaatatttt
tcattaaatatcTGCATCAAATAAGATTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000116TCONS_00000116Clytia hemisphaericatranscript
TCONS_00000117TCONS_00000117Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000116-proteinTCONS_00000116-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:2202192..2206120 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.36	2.69	2.43	2.44	0.14	0.18	0.46	0.2	0.09	0.11	0.28	0.11	499.37	423.89	0.49	0.48	13.25	10.19	1595.79	1763.76	166.4	160.83	15.77	27.05	48.31	45.64	0.08	0.08	0.31	0.19