XLOC_000029 (gene) - C. hemisphaerica

Overview
NameXLOC_000029
Unique NameXLOC_000029
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000001:1140426..1144762+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000029 ID=XLOC_000029|Name=XLOC_000029|organism=Clytia hemisphaerica|type=gene|length=4337bp|location=Sequence derived from alignment at sc0000001:1140426..1144762+ (Clytia hemisphaerica)
GGACCACCATCTTTGAAATGAAatagtttttataagaaccaactAAATTT
AGCTTCGGCTTCTCTTGTATTCTCGAAATCTTTAACTTAAGTctcgaatg
ttcttaaaatgttcttaaaatactCTGTTTCTTTACTAATTGCTTTGGTG
TTTTCTGGAATACGAGACTAGGattattctaaattttgttCTCAGgttca
aaacaaattatataactattgttcttatttaaaatcttttttatcaaaaa
gcaacTCCTTTTTGGTTGAGACTTCCTTCCGTGTTCACACTTTTCACAAT
CAAAAATAACATACAGTTTCCTCCGTTCCcatccattcagacgtacataT
TACATATAAGCAACATTACATAAAAATTCACCAAACTAAGAAGTGATAAG
CAGAATCACTGTACGTATGTGGAAGCCATGAAAATTGAGTAAATCAGGAG
AACCTAGTTGGCAGACAAGCATTTAACCCGTCTTTTGACTTGTTCATTTC
AACAACATTATACAAACATCTAATCAAGTTTCCTTCGTTGGTAATTGACC
GACCAATTAATGACGATGTGCAGTTATCAACATAccaatttatttttcat
atctatttttcttcaaatctcTTCTATTTACACCGTTCCGCAAATATTCA
CCAAGGTTGTTGGTGGTGAAAACGTCAGGATTGAAGGTATTGATGCAATT
TATGAAAGATCAGTATCCAGTCCAACTGAATGTTCCCTAATATGTCAACG
CCATAAATGTGTTTTCGCCCAAACCGTACCTCAAGAGAAACAGCCAGGTC
TTAAATGTTCGTTATTCAGCAATATTGAAGATGTCTCGGCTGTATTGGTG
CATCATAAAAGCGCCAAGATTGTAAAGTTGAATGAACAGCTTTCTTGCAG
CAACGAAGATCAAGATCCGATTCTTCCACTAGCACCATCACCGCCACTAA
GCAGTTTACCGGAATGTCTTGATTGGTATGAGAATGGATCTGAAGACGAT
GGTGTGTATAACATAACCATCGGTGGAAAATCAACTCCAGTCTATTGTAT
AATGTAAGATCAACAAAGTTTCGGAGCAGGTAGGTTCCTCTTGAATTTTT
ACCATATATCTACTAATTGGAATCTCAAATATGGATTTGTTTAACTGGTT
CACAGTCCCGATAGAAAGATGACGTCGAAAATCAAGGTTGTTTGGATCAC
AAAAGTCCTACAAACAAACTTCCAATCCTTTCCCTGTCTACAATAACAAC
GATATTAACAAAGAAGGAAACGGAAAAAGCTTTCTCTTTGCTCACAGCTT
GTAGGTACTGTAGAGAGCAGAATTAAACTTCAAAGTCTTATGAATCGCAT
CATTAGAAAAGACTTAACGGGGAAATAAAATTTCCGTGGTTTAAGAAGAT
GGGCGTTTTTTAAGAACAGATATTCGCAGGTTGACACCtactttttaatg
aatttcttttcttcaatatcttaggaaattcatgattttttaattttcaa
tatttctgcGAAGCTAACTTTTACGGTAGAAACCCAAACTGCACCGCGAA
AATTGGTTCCATTAAGTTATCTTTAATGATACCGATTTTTCAGTGTAATT
TGCTCTATTGTTTTGTTTAGGATGGACAGTTTTCCAGCGCCGTAAAGACG
GGTTTGTCGATTTCTACAGATCATGGTTGGACTACAAGGTTGGATTTGGT
AATATCCATGGTAACCACTGGCTTGGTTTGGAGAAGATTCATCAATTCAC
CAAATCCAAACCAACTGTCGAAGTTCTCATCTTTGCTAAACGATTTATTG
GCGATACAAGATTTGAACATTTTGAaggtacagttgacgctctctaattc
gatcttcaaggggattttgaattttcatcgaataagggagcttatcgaat
aagagagcgtcgtttatgagagtttcttgttgacggggactttaaatatc
atcgaataagggagcctatcgaatagtagaacgtcgaattagagagcgtc
gactGTAATGTAAATTGTTTGCTAAATGCGTTTGAATTTTCCACTGGTGG
TAACAAATTTCTTTGCGTTCCTTTGCGGGGTTTTCCATCATGTATtcctt
ctttttgatttttaactcATTTTATTAACAGAAACCCGACAAACTCAACT
AAAGGCCCGTCACTTGCCactaatttttaatttcaaactaACTTTGCTTC
AACTattgttaaaggttttatttttacataagtgtccccgtttcatatca
gacacaatcaggacagtgtcttcctattgttatattatgctgatataagc
aaaaaatgttgttcttttcctctttctgaccaatcttgctccacatccgt
gtcaattcaacgtgaaaaagcttgtaaattaaaattgataactaagcaaa
cgatatcactcttatttaaaaacaaaacccttaactttgtttttaccttt
tttatcaTCAAGGTTTTTCAGTGGATGGCGAAATCACAAAGTACAGAATA
ACAAGTGGTAGAAAAACAGGTGTAAATTACGGGAGAGATTGGACAGCTTT
GAATGGGATGAGATTCAGCACATTCGATTCAGATAATGATAATTTTGGAG
ATAGTAATTGTGCCCAAAATTACCCTTCAGGTAAATTGAAAGACCACTAA
TTCATTTACTGTTATCTACTCTTAGgctccaaataaacgggccccacCGC
TTGTTAACTTTTCGCCCCTTATTTCGCtctaaaaagcctgattttaacct
atatttaccttattttttggTTTTCAGAAGTACGATTTCCAACctcccgg
caattaggtcccctcccgtttatttggaacctaagagtacttcgGTAATA
CTCTCAGCTCAGATGCCTGATAAACGGGGAGAGGGGTTTGAATAATCAGG
GGGGGAGCTAATTTTCGAGGAGGTTGGTAATTGTACACATAAATGCCCCC
AAAATAAGGTAGTTATTAGCAATTTACAGCGCTtgttttaaaaacctttt
ttggttGTGTAAGAGAACGATGGACAGATCAGGCCTTATAAGAAGAACAA
GCACTCGCTATCCTAGGGTCGAGAAACTACTGCGCTTACCCGACTCTGTC
AACTCTTGACGCATAGAGCTTCCGGTGCATAATAACtataaacgcttttt
ttataagaatggtgtaaatccatttcatcatggatattctcaactttttt
gggaaaatcatcctgaaatattcttacagcattcttaggttaggatccta
attcagactagatttaacatttagtacatacgtctcaagcataaaatagc
atttttgtgaaaggagtgagccttacatGCTGGTAaatggcaatttataa
ttgaaaattctctaaaaatgacagacattcttagcttgagtagaaAAATT
CCATTAaaggtgatattcttagcatattcttaatatataatttttggcca
ttttcatcatggagattcttataaaaaagtgtatccttataaaaaaacac
gtgtaCTCTAAGTTAGCTTGATGGGATTTGAAGAGGGTTACAAACATAAG
ACCAACTTTGGAACGTTTATTTTTCATAGGTTGGTGGATGAACAGCTGTT
TTCCAATCAATCTGAATGGTCGTTACCGATCGAACGGAGGTGTACCATCA
TCGTCTCAAGGGATCATTTGGGAAGAATTTGCAGGTCCTGTTGAATCTCT
CAAAGAAACGCTAATCATGATGAGAAGTAAAAAAGAAGAATCGCTTGAAT
CGTTTGAATCAATTTCAATCGATTGATGAATCGATTGAATCGTTTTCAAT
CGATGATTGATCATTATTATTACACTTGAGTgtatcttaaaatattttat
tatgtATTTGTTATTTATGTATTTATGTAAGCAAGTTCCTTGATGTAAGT
GAGCCGTGATTAGATAAGATATCCTATCTAGGTCACATGAAATTCATTAC
CATAGAATTTCAGCGTTTGACCAATCAGAAACGTCGCGGATAACAATAGC
AATAACTTTTTTTACTTGGAAAAagcttaaagcactccatctTACCCTTC
GAGCTTTACAGAAATTTGTGATTTGTACTCTTATCTTCACAAACGCACAA
TGGCAAACTTCTATTGACTAGAGTTGTTGAAGGTTTTGTTTTACTATATT
AGTGTTCCattttcatatcagacacatatttcatattgggacagtgtcta
cctattgttatattgtactgatataaaaaaaaaatttcttttcttctttc
tgaccaatcttgctatCTTGCCAATtcgaaaaagcttgtaaattgaaatt
gacgagtaagcaaacaatttcactcttatttaaaaac
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000050TCONS_00000050Clytia hemisphaericatranscript
TCONS_00000051TCONS_00000051Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000050-proteinTCONS_00000050-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:1140426..1144762 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.68	0.52	1.08	0.87	0.38	0.34	0.82	0.98	6.79	8.14	5.5	8.87	0.35	0.29	0.37	0.26	0.61	0.72	0.24	0.22	0.5	0.4	0.22	0.23	0.51	0.44	0.8	0.23	0.55	0.44