XLOC_000018 (gene) - C. hemisphaerica

Overview
NameXLOC_000018
Unique NameXLOC_000018
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000001:766554..770771+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000018 ID=XLOC_000018|Name=XLOC_000018|organism=Clytia hemisphaerica|type=gene|length=4218bp|location=Sequence derived from alignment at sc0000001:766554..770771+ (Clytia hemisphaerica)
ATAAAACTGGCTGGGTAATGTCGACAATTATCGGTCTGtaaattaaaagt
tgttttctaaatattagaaaacgaaagtccATTCTTGACCATTATGAAAT
CTATCAAGAGaagaaaaagtcagaaaaacgcAGTCGCATTAAAGATTTTC
AACTTTAAAAGATTTCATCTGGCATATTTGTTCATATTTTCTATACCTAT
CAACGATGGTGAACGTTCAGAAAGGTGTTTTGATACAATGGTAAGACACC
TCTTCTCGAAATAGATCTTTTGCTTTTATCAGAATGTCGTGGGTGTTCAG
TCAGGGAAATTTTTCTATCTTATattccagacccccgcgctcgataggat
cgatcatcggagcggctcgatgacggatcgatatgtgatcgatggattac
ttatcgatccggataggaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNgatctcctatccggatcgataagtaatccatcgatcacatat
cgatccgtcatcgagccgttccgatgatcgatcctatcgagcgcgggggt
ctggtatATTAAAATTTTGCGTCGCACCACGATTAACTGCAATTACATAC
TTATTGTTGACATGAtatttcaatagacctttttgcctttccatctGCCA
TACCGTAACtaggtctaatgtcaacatccctcctctaatttcgacaccct
ttttatcagagctgaaattgatataaaggttgaaactgtttttctttgct
tgatGGTCAGAGAGGGATTATTCTTTTTCAATAAGTGACTCAAGCTTTCA
TATATTATTCCTctctctaaaaaagggtgtcggaattagacgagggatgt
cgatattagaccaacttacggtattgaattgtatgcaaaaatgaTGGGGG
CTGAATTGCCGTGGCGAGATTGCATTAAAAATATGGCAAAACCTATCAGT
CTAGCAAACCGAGCAAAAAGTTAattcttctttcagaaaaaatactATAA
TTTGTTAATACCtctattcttgcagcttcccaacatccaagctctcaaac
attaGAAGGCAAATGAAATTACTTCGATTTCCCATAGAAATTATGCaatg
aaaaatccgggggtcaataaaccaaccagacggtactaatcgataaactt
gattatcaaagaaattgataaacttgattatcgaagtaatcgataataat
cgaagtaatcgaacaaccatttatcgattaacaatcaaatttgagtacca
aaatttgaaaaaaattgtgagtcttcgatcactttcttaacaacccttcg
aGGAATCGATTACTGTTTgtgagtactttgattgttattgattgttttcg
ataactttgacaacttcgataaccaattgattGCTTCGAAACCAATTACT
Atgatatatctttaagaaaaaccaaaaaaactgacctaaaaccaaagcaa
agaagaCCCGCCATAAAGATTGACCTCCTTAATTCCCAACCATATTGCGC
CCACCATTTTGTGCGCCTTCGCCCTGGCAGTCTAGCAGAATGTTAattct
tctttcagaaaaaagactataatttgtttacctttattcttgcagctttc
catcatccaagctctcaaacatcacaagcggaatgaaattactttcaatt
tcccgtagaaattatgcgatgaaaaatccgggggtcaaagaataaaaact
ttcttttcagcACTAGTTATCTTTGCTTATAacgaattattacttttcaa
tatattttttaaatataatttctGCTTACAAAAATACTTAACATTGtact
gaaagtttgaaaaagttgattctACTTAGTTCTTGTtgaatttaagcgag
tttctattttgcaatttttctacagagacaaataaagattttttctattg
ttcttgcttGATTGCCTCTACTGTAAGGGTAAGTTCCGTAGGAATGAGGC
TATCGAGACATAATGTGACGAATTTGCAGGAAAACTAAATTTAACATTTC
TCTAGGCTGACTATGCGAAAGAAAGTatatattaatataaaacttacatg
catattGCATATAATTGGCAtaattaaagtgtaatcttgtagatgAAAGA
TTAAAAtagcttctcttgaaaactagaGATAATTGAATTCACTCATCTCA
CAGAACAAGGGCtgcttagaacaagcacttgacttcaaaaaaccataaca
ttagacataaactcaagctgaaaaatcaccagcgaaggtaaaaaaaatcC
TTAATCAGCTGACATTGAATTATTGCatatgttttgaatattttccaact
aaatccgcCTACCACGACTTTTTTGTTGCTGtattttgcatacaattcaa
ggcGAAAGGTCTATCTCACTCTTCTTGAAAATCTTCGCTTTTGAAATCTG
CACTTTTTTGTATATTATTCAAGATAAAGGGAGGACTTTATTTAAttaat
aattataataataatcCCCAAATTTATTTCCTCAAAATAAATATATTATA
TAAATATGAAATACTGCACCATGAAAAGGaaagagaaagttttttttcaa
aacattataTTCAAATAGCAGTTGTACAGCAATTAGAATTTTGGAACCAT
GGTTATTATCTTTGAATGGAATCAATGTTAgagtttttggaatttttgaa
agGTTCTTTTAATAGCCATGTCATgtctgttccaaaaaaaatctGCACAT
TTTGATACaatcttaaaagaaaaaagtaacaCCTTATAACGTAATAAAAT
TAcctgaaataaattttgagtggatgattttacctttcagaaaattcgGA
AAATAAGAAGGAAACATTCAGAATTTTTTCTGCTGGGCAAAATTTTTGCT
GTTCTGAACTTCACTGATTTCAGATATGTATTcagaatttttatcatttt
cttggaaatttcAGCCCTCCGAAATAGGCTTTAAGTGCCAAAAGATTGCA
AAATGTAcccaaaaaaactttcataaagttccaaaatattgcaaatcaac
aaaaaagattaaaatcttaactcaattttatttttattcctaTATTTTAT
CAATCCTGGGTTAACTGTTTGTGAGCTGACGGTTATGTCtgagccaaagt
tcgaaaattgaCTTTGCTTTTTGCCCCTTTTCTAAGTATTTTACGATCCT
GTGATGGCCCCAATTTTCAGTAATAATTTTCCAACATTGCTCTTTTTCTT
TTGAGAATTTATCAGTATCACCCTGTGAGGAAGttgctttttgatatttt
gttcttCAGGTCTCGAGAGGATCAACCGTTTCTACCCCCTAGAGATGTTT
CTATTAGTGTAAAAAAGGGATCTTCATGGCTCGCACACAAATAACCCCTA
GATCTTTCGCTCAACTGTTCTTCtcctttttctttcagtgaTCCAACTGT
CAAACAATTTCTTCTCCACATGGACGAAACAAGATCATTGGGTGAAAAAT
TCATTCTCGAAGACATGGATGCAACACATCTTTTTGTATCAGCCAAAGTT
ATCAAGACGCTTGAAGCGAAATTATGGGAATTAATGGACAAGTTATCATT
CCCAGTCGGGGATGGTCAGTAAAAGTTATCatgatttttgaatgttttta
acaAGAAATATTCACTTGTACGTGTTGGTTGGAATCGAAGAAAAACAACT
ATGTCAACTCCTGTTGTGAATAAACTTTTGTCGAAGCGAATATACGAATT
GTCGCTAAACCTTTACCACAAAACTATCGATTCTGACCCAAGCATTCCAG
ATACAAATTTTGGGTTAACATTTGAAGATTTGAATGAAGACATTTTGTGG
TTAAATTCGACATTTAAATTGATATAGCATAGATCTTATATGGGGGTATT
TCAAATATAGCTACGTCATAGTCTCAAGTTAAAAGCTTAAACTACTTCTC
TCTACTTTTCTAGTGAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000029TCONS_00000029Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:766554..770771 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
23.08	20.39	18.24	18.14	18.86	13.48	15.05	15.07	12.37	9.64	7.83	7.86	5.82	4.42	7.84	6.4	13.49	14.9	3.99	7.99	11.58	11.09	17.65	15.51	7.94	11.15	18.56	14.2	14.94	14.3