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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009889 ID=TCONS_00009889|Name=TCONS_00009889|organism=Clytia hemisphaerica|type=transcript|length=1078bp
ctagaagtttcaactactttcgttttctaattttttttccgatgacaccg
ccgccgccgcgaaaggctatcgtaatactttcgctatgcgaaattaataa
gaGTAAATTTCACAGTacaataaaaagatattcaaatccAAAGACattga
ataggtttttgagATTAAAGTATTAAGTAAACAAgccatgaaattttgca
taaatcACGAGGATTTTACTTCGTATAAAAATTTGTCTGCTtattttggg
acacactgtttAGTCATTGCTTGTTAATAAGTTGCAACACCTGTGGCGAT
GTATCTCCAGTGAGATGAGAATCTCATTAACAAAGACATCGAAAGTGAAT
GGAACCTCGATTAGACTacggtgttcttataaaactattcttatagaaga
aaaAGAGTGTATCGTAATTACGGCTTTCATCAAAGCTTAATTACCATGTT
TGGTaaggtttttaagatattttttcttcgttttttttcgggAAGGCTTT
CGTTTTTGAATGTTTCACAAACTTTTCGGTAAGATAGTCGAATGTACGGT
AGAATTACAACAATGTTAGAGTTAAACCAGTGACAGTTCCGAATTATTTC
AGTCAGGTGTGCATATGAGATTTTTAGTACTAAGTCATTAACTTTGTTTT
CTCTTGACAAAGAAACTCTATATTGTTTCGACTTCTTGTTTTCTGTtggt
ttgtttattcttttgTACAAAAGGtttctattttgaattttatgaatTAA
TTGTTATTATTCTTAATTATTTTTgcaattgaatatttttgtttgttttt
tcttaagaTTTCTCCTTAGTTGAGATGgtatggagtttttacaagatact
ttaataattggtcatttgaagtaatagagatgacgcgttctttagaaaaa
gtaacaaaattgtttttattacaggttaatgaccaaccaaatcaaataag
agcttgtaaaaactccagcttgtccccctTAGTTTGGTCACAACAAGGAA
CTGTTTGAATATCTGTATTagcaaaactaaaaaagtttcaGCGTCTCAAA
ATTAAGCAAAATTCGATAAGTCTTGGCG Run BLAST on NCBI transcript from alignment at sc0000099:579129..580206 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009889 ID=TCONS_00009889|Name=TCONS_00009889|organism=Clytia hemisphaerica|type=transcript|length=1078bp|location=Sequence derived from alignment at sc0000099:579129..580206 (Clytia hemisphaerica)
CGCCAAGACTTATCGAATTTTGCTTAATTTTGAGACGCtgaaactttttt
agttttgctAATACAGATATTCAAACAGTTCCTTGTTGTGACCAAACTAa
gggggacaagctggagtttttacaagctcttatttgatttggttggtcat
taacctgtaataaaaacaattttgttactttttctaaagaacgcgtcatc
tctattacttcaaatgaccaattattaaagtatcttgtaaaaactccata
cCATCTCAACTAAGGAGAAAtcttaagaaaaaacaaacaaaaatattcaa
ttgcAAAAATAATTAAGAATAATAACAATTAattcataaaattcaaaata
gaaaCCTTTTGTAcaaaagaataaacaaaccaACAGAAAACAAGAAGTCG
AAACAATATAGAGTTTCTTTGTCAAGAGAAAACAAAGTTAATGACTTAGT
ACTAAAAATCTCATATGCACACCTGACTGAAATAATTCGGAACTGTCACT
GGTTTAACTCTAACATTGTTGTAATTCTACCGTACATTCGACTATCTTAC
CGAAAAGTTTGTGAAACATTCAAAAACGAAAGCCTTcccgaaaaaaaacg
aagaaaaaatatcttaaaaaccttACCAAACATGGTAATTAAGCTTTGAT
GAAAGCCGTAATTACGATACACTCTttttcttctataagaatagttttat
aagaacaccgtAGTCTAATCGAGGTTCCATTCACTTTCGATGTCTTTGTT
AATGAGATTCTCATCTCACTGGAGATACATCGCCACAGGTGTTGCAACTT
ATTAACAAGCAATGACTaaacagtgtgtcccaaaataAGCAGACAAATTT
TTATACGAAGTAAAATCCTCGTgatttatgcaaaatttcatggcTTGTTT
ACTTAATACTTTAATctcaaaaacctattcaatGTCTTTggatttgaata
tctttttattgtACTGTGAAATTTACtcttattaatttcgcatagcgaaa
gtattacgatagcctttcgcggcggcggcggtgtcatcggaaaaaaaatt
agaaaacgaaagtagttgaaacttctag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009889-exon-sc0000099-1491911889:579129..580206 | TCONS_00009889-exon-sc0000099-1491911889:579129..580206 | Clytia hemisphaerica | exon |
| TCONS_00009889-exon-sc0000099-1510915933:579129..580206 | TCONS_00009889-exon-sc0000099-1510915933:579129..580206 | Clytia hemisphaerica | exon |
| TCONS_00009889-exon-sc0000099-1575043694:579129..580206 | TCONS_00009889-exon-sc0000099-1575043694:579129..580206 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000099 | supercontig | sc0000099:579129..580206 . |
Blast
The following BLAST results are available for this feature:
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