TCONS_00009321 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009321
Unique NameTCONS_00009321
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length229

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009321 ID=TCONS_00009321|Name=TCONS_00009321|organism=Clytia hemisphaerica|type=transcript|length=229bp
CTCCATAATCTAAGTGTGGTCTAACATAGGTTTTGTATATAGTGACAAGA
GAATCCCTGGGTAGAAACTTGCGAAGTCTGCGAATAAGACCAATACCTAG
ATtagccttttttattttttcatcaaggtgacggtcaaaggccagctttt
gatcgagtatgagaccaagatgtttCTGATGATCCTGAACTGCAATGGCT
GCATTATTGAATGTAATTTCTGGGGGGTC
Run BLAST on NCBI

transcript from alignment at sc0000091:446288..446516

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009321 ID=TCONS_00009321|Name=TCONS_00009321|organism=Clytia hemisphaerica|type=transcript|length=229bp|location=Sequence derived from alignment at sc0000091:446288..446516 (Clytia hemisphaerica)
GACCCCCCAGAAATTACATTCAATAATGCAGCCATTGCAGTTCAGGATCA
TCAGaaacatcttggtctcatactcgatcaaaagctggcctttgaccgtc
accttgatgaaaaaataaaaaaggctaATCTAGGTATTGGTCTTATTCGC
AGACTTCGCAAGTTTCTACCCAGGGATTCTCTTGTCACTATATACAAAAC
CTATGTTAGACCACACTTAGATTATGGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005213XLOC_005213Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009321-exon-sc0000091-1491911889:446288..446516TCONS_00009321-exon-sc0000091-1491911889:446288..446516Clytia hemisphaericaexon
TCONS_00009321-exon-sc0000091-1510915933:446288..446516TCONS_00009321-exon-sc0000091-1510915933:446288..446516Clytia hemisphaericaexon
TCONS_00009321-exon-sc0000091-1575043694:446288..446516TCONS_00009321-exon-sc0000091-1575043694:446288..446516Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000091supercontigsc0000091:446288..446516 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.07327	1.04661	0	3.56669	1.44737	4.57492	5.51945	7.75086	0.904427	4.48111	2.17474	2.14438	0.7138	1.48258	1.82832	1.96207	0.805702	2.47746	1.14091	0	4.15081	0	0	0	0	2.05685	3.49889	0	0	1.21369
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009321 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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