TCONS_00009219 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00009219
Unique Name	TCONS_00009219
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1995

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000091:32902..43902-

transcript sequence

>TCONS_00009219 ID=TCONS_00009219|Name=TCONS_00009219|organism=Clytia hemisphaerica|type=transcript|length=1995bp
atTTGTAACAGGACCGATAACCTTACATTTTGTTGTATTTATTGGTAACA
TCTAACATTGAATTTATATCTCATAGACAACTCTAAATAATACTAACATT
GGCTAAATGGTTAAATGACAAAATGAAGGCAATCTTATGGCAAATTTTCT
TGGTAGTTTCCCTCGTTGGTCAAACTTTGTGCGCAGAGAAACCAAACTTT
GTTATCATCGTAGCTGACGATTTGGGCTGGAATGATGTCAGCTTCCATGG
ATCCGATCAAATCCCAACACCGAATATCGATAAATTGGCAAAAGAAGgaa
ttattttgaataattattaTGTTGCACCTATATGCTCACCATCTCGAAGC
GCTATCATGACTGGAAGATACCCTATTCATACAGGTATGCAGGAAAGCAC
AGTGTTTGCTTCAGATACATGGGGAGTTGGtttaaatgaaacatttttac
caGAGATTCTCAAAGAACAGGGATATTCAACGCATGCTGTCGGCAAGtgG
CATGTTGGTATGTTTGCGAAAGAATACACTCCAACATACAGAGGCTTTGA
TTCGTTTTATGGTTACTACCTTGGGAAAGCTGATTATTGGGACCACTCCA
ATAATGAGAAGTACTGGGGACTCGATCTGCATGATAATTTTGAGcCTGTA
TGGACACAATGGGGTAACTACAGTACGGAGATGTATACAGCAGAAGCAGA
AGGTCGTATACACAATCATGACCAATCGAAACCACTTTTCTTATACCTCG
CATATCAAGCGGTTCACAGTGCTAATAGGGATGCAGATGCACTGCAAGCC
CCCGATTCATGGATACGAAAGTACAATCACATTCAGCACGAAGGACGTAG
AAAATTTGCAGCCATGATGGGTTATATGGATTATGGCATTGGAAGGGTCC
ACGATGCTCTTGTAAAGACAGGCATGATCAACAATACAGTCATCATTTTC
ACCACAGATAACGGAGGTCCTGCTAATGGTTTTGACCAAAACTGGGCAAA
TAATTTCCCTTTAAGAGGTGTCAAGGCTACACTATGGGAAGGAGGTGTGC
GAGCGGCTGGATTTGTGCATAGCAATTTGTTAAAGAAGCCAGGCCGAACA
TCCATGGACTTAATACACATTACCGATTGGGTTCCAACGCTGGTCAATTT
AGcaggtggatcttcaaaagctCCCTTTGATGGTGTGGATCAATGGTCCT
GTTTATCTGAAGGTCTACCTTCTGCAAGAGAAgagattttgttgaatatt
gATAACGATCGATGGATGAATAAAGCTCTGCGAATGGGAGATTGGAAAAT
TATACAAGAAACTGGCACATGGGACGGTTGGTATGCCCCACCAGGGGTTA
TTGGTATGGAAAACACAAATCTGGTTGACGACACTTATATCACATTCCAA
AGTCAACCAGTGGTCAATTGTGGTGAAAAACCTGCCAATGTTTCGAGCAC
GTGTTTTAAGAAACCCAATTTCTGTTTATTCAACATCATCGACGATCCTT
GCGAATATCATGATTTGTCAGGCAAATATCCTGAACTTCTGGAAACAATG
AAGAAAAGATTGCAATTTTATGAGGATAGTGCAGTTCCACCAAGAAGAAA
TGAGACAGGAGATCCCAGAGCAAACCCAAAGCTCCATAATGGTGTATGGG
TACCTTGGATTACTCTACCTTAAATCTCACAGAaagcaaaaagtcaaaat
attaaatgaaaatatcaTTAATTGTAGAGCTGGTAGGATCATAATTAAAA
CCTGACATCTAATGTCATCTAGTTTTAGACGTAGTTCTATATTCGTCGTC
GAAcgatgtattttatattttaacaTTCCTTGTATTCCTTGTAAACATGT
GTTGTTTGTAGCGTTGATGGATAAAGTTTATCAAGAATTCAACCCTTCCA
CTGGCAATCCCAAAGTGTTGGATTTTAAGGAATCAGtcaaaaagaacttt
tttgcaGCTACAGATATAAAGAGCATTCGAAAAATTGTCTTtaat

Run BLAST on NCBI

transcript from alignment at sc0000091:32902..43902-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00009219 ID=TCONS_00009219|Name=TCONS_00009219|organism=Clytia hemisphaerica|type=transcript|length=11001bp|location=Sequence derived from alignment at sc0000091:32902..43902- (Clytia hemisphaerica)
ATTTGTAACAGGACCGATAACCTTACATTTTGTTGTATTTATTGGTAACA
TCTAACATTGAATTTATATCTCATAGACAACTCTAAATAATACTAACATT
GGCTAAATGGTTAAATGACAAAATGAAGGCAATCTTATGGCAAATTTTCT
TGGTAGTTTCCCTCGTTGGTCAAACTTTGTGCGCAGAGAAACCAAACTTT
GTTATCATCGTAGCTGACGATTTGGTAAGTACTCTAACAAACTCATAACA
CTTTCTGAATCCTCGATATAGGATGGCAATCGATCCAGGGAGGTGGGATA
CCCAGGTATTTGCGGATCTTCAAATCTTGAAAAATCCTGTTGTATTTTTT
CTAAAAAATAAGAATATCGAGTCCCTCAAAAGGGTAATCGGTTCTCGCAA
AAATCTCACTGAGATACAACCTACCTGGACATAAATTGAACATTTGAATA
AATTTATTTGATTGAAAAATTCAATTAGATTTATTTATTTTGGCCCTCAT
TCATGTCTGCTTTTCCACCAAAGGGCTGGAATGATGTCAGCTTCCATGGA
TCCGATCAAATCCCAACACCGAATATCGATAAATTGGCAAAAGAAGGAAT
TATTTTGAATAATTATTATGTTGCACCTATATGCTCACCATCTCGAAGCG
CTATCATGACTGGAAGATACCCTATTCATACAGGTTATCATTTTTTTTGT
TCTAACCAAATGACTCTGGTAGTGGAAACAACTGTTACTACAGAGAGTTT
ACTGCTAAGCTTTTGGGTTTTAATGTTTACTATTCTATTTGTCATTTCAG
GTATGCAGGAAAGCACAGTGTTTGCTTCAGATACATGGGGAGTTGGTTTA
AATGAAACATTTTTACCAGAGATTCTCAAAGAACAGGGATATTCAACGCA
TGCTGTCGGCAAGGTATGTTTGTATATAATTTAATGATGTGAGATGCTGT
GCAATCTTATGAAGTGCTTGTGAGTCCCAATAAGAGCGAAATGCATACAC
CTGCTCTGAAAGAAAATAGTTGGACAGTTATATATATTAATTTCATTCAC
TTTGAAACTTGTTTTTACTTTGGTTTTAGTACAAGTAGTGCTCTATGAAT
TGCTTTCTCTGATTCGGTTTGCTCAAGTCAATACTTAGACCAAGGACACT
TGTATAGCGTATACAAGTGTCCTTGCTTAGACTCAAAGTAAGCCGAATTT
GACCTTTCTGAAAAACGAGGACACTTCATCTCAATGAATGAAATAAATGT
AAAATATTTTTTTATAGTGGCATGTTGGTATGTTTGCGAAAGAATACACT
CCAACATACAGAGGCTTTGATTCGTTTTATGGTTACTACCTTGGGAAAGC
TGATTATTGGGACCACTCCAATAATGAGAAGTACTGGGGACTCGATCTGC
ATGATAATTTTGAGGTCAGTGTTCTTTATTATATACTCAACTGCTCCCCT
CTGATATTGATAACGATGTTGTGAAATTCTTGTTGACATATTTTTACTTG
AGCATTATCATTTTTTATAATCTAGGGTGTTACCGGATTTGTGGGTTGTC
TGACTGAAAGTTTTTTGATTTCTTTCATAATTTCCAAAGACAGTCTATGA
GGAACTGATTTCTTCGTTTCCGTGTACTTGTGACTCTTTTAAGGATGAGC
AAAGTAGAAAAGCCAGTGACCTATCTTGTATGCCTTTTTATTTGTCTATG
TGCTCCTGAGCTCAGCCCTGGATAATTCAAATCCCTAAAAGTGATCTCTA
TTTGTTCTTACCAACATCATTATCTTGTATCTTTAATAAATTTAGATGGT
ACAAACATCAGCCTTTCTTTGTTTATACTTCTAATTTTTCGTCATTTTAG
CCGGTATACACACAATGGGGTAACTACAGTACGGAGATGTACACAGCTGA
AGCAGAAGGTCGTATACACAATCATGACCAATCGAAACCACTCTTCTTAT
ACCTCGCATATCAAGCGGTTCACAGTGCTAATAGGGACGCAGATGCACTG
CAAGCCCCCGATTCATGGATACGAAAGTATAATTACATTCAGCACGAAGG
ACGTAGAAAATTTGCAGCTATGATGGGTTANCTAAAAGAGCACTCCTTCC
GCCCGCGCGACTTGCAAAAACCTCTCCTCATTGAGGAGAGGTTTTTTATA
CTTGATACTTGCTGTTAAAAGTCAAGGGATGATAAAGATCCTTTCTGTCA
CCGTTCAAACTAATTTTTTTCCATTTAACAGCAAAATAAACATTTAAAAC
CGAAGAACCACTGCTTAGATTGCTTANCAATGCTTATATTATGCTGAATT
TTACTGCCATCTAAATTTCCTTGCTATTTAGCAACTCAACCATACTTCCG
AACAAAACAATATTTACCATAAATTTACTCATGTACCTGACCAATATATA
GCTTATTACAGAGTGAAACCCACTGACCTTTATATATCCATGGACCAAGC
TATATCCGCCATCTTTGATTGGTTTTTTTTTGGAATTGGTTCCCGAGAAG
AAGCCATTGCAATGTTAAAAATTAACGTCTAACGGCGCTACATCATCAAA
AGTATTCGAGAACTAGCCGTATTGTATAAGGGTNCGCAATTTGATCAACT
TCAGATTCTAAGTCCGTGTTTCGGCTTGCGGTAACTTTATTGCTGTTCAC
TGCTAGGGTACACCATTTTAAAACGGCTTCTTTCGCAGTCCTAGCTACCA
AACCGAGAAAGTTTTCGTGGCTTCAAGCCAAACCATTCAAGGTCATTTTG
ATAAAATCATCGGTTTGAAGATGTGATTTATATAGCAAATTTTATAGCAA
ATTTTCGCTTGGGATAGAAGTTAAAGGTACGTGCACACAAATAGCAAAAC
TTCTTCGCTCATAAATTCGCTTTGCAAAAAGTAGATCTAGTGCTCTCGAT
GCACTCAAAACTACATATATGAGTAGTGCCGCCATTAGGATACCATTTTC
AAAAAAACTCCGATCNTTAGCAAAATAAGAGACACTCTAAAAATCCCTCT
AATAAAGCCGCTATGAGACAGGTTCGTAAGAGCCTTAATGCCCAAACACA
CCACATAATCCACGGCGGCACAACACCCGCCGCCACCCGCGCATCGCTCT
TTTTTTCATTCTAGTTATTCTAGTGTAAATGGTGCCTTAATAAAATCGAA
GGATATTCGTCGAACGATGATCGAACATTTTTATCCGAATCACGAATCGT
CTGTCGAAATCATCAAAACATAAAANTCAGTCCAAAGCTCAACCATTTAC
GCAAATTTTATATCGGCCAAACCTCTTAAAACAAAATTTCATGTTTTTTC
GTTGCCACAGGTCCACGATGCTCTGGTAAAGACAGGCATGATCAATAACA
CAGTCATCATTTTCACCACAGATAACGGAGGTCCTGCTAATGGTTTTGAC
GCAAACTGGGCCAATAATTTCCCTTTAAGAGGTGTCAAGGCTACGCTATG
GGAAGGTACGGCCCGAGCGCTATTCCAACTTCGTTTCAGCATCCATTTAA
CGTTTTAAGGGCGTTATAGGCGTTAGCTAGACGTTGTTTTGATATTTTCA
GACATCTTGGAGAAGGTCTTACCTGTTGCTGTATGATTCTTAAGTCGAAT
TCATAAGATCAAAAGCTCTCCTTTAAGCTACTCAACCACTTTCAAATTAC
TTGCAATTTCATCTATTGAATCTTGAACGAATAAACTATTTTTTAAGAAG
TCAGAAAACCAGCGAAATTTTACGGACCTTTGACTTTTTATTATTTTAAG
GAGGTGTGCGAGCGGCTGGATTTGTTCATAGTAACTTGTTAAAGAAGCCA
GGTCGAACATCCATGGACTTAATACACATTACCGATTGGGTTCCAACGCT
GGTCAATTTAGCAGGTGGATCTTCAAAAGCTCCCTTTGATGGTGTGGATC
AATGGCCTTGTTTATCTGAAGGTCTACCTTCTGCTAGAGAAGAGATTTTG
CTGAATATTGATCACCATGACTGGAAAAATAGAGCTTTACGAATGGGTGA
TTGGAAAATTATACAAGAAAGTATGATGGTTTTGATTTTTTTTCCATGCT
TTCTTTTGTACGCTAGCAATACAGCATCAGTTTTATTGAGTTGTAGATTA
AAAAAGGTAGTGTCCTTAGCGAAAAGAAAAGGTGGGATAAGATTATTGTT
TTCTATTCTTATTGATATTGTGTGTTTCGTTAGATACTAACTACAAAATA
TACAAGTGTCGCTGTATAATAACGTGGTCAATCAATTTTCCCCGACGGTC
AGATTCTTTTACTTTCAAGTATATTTTTGAATGTGAAAATATTTTTCTTC
TAAAAAGCTATTTTAATATACTGTAATCGATTTTAATCAATCATCAATGT
TGAAACAATTAATGTTTATTGTTCTTGCCTTTTAAAAATTAGATAAACAA
TATTATCTCCTTTATCTTTCCTTTTTAGCTGGTACATGGGACGGTTGGTA
TGCCCCGCCAGGGGTTATTGGTATGGAAAACAATATTCTGGTTGACGACC
CTTATATCACATTCCACAGTCAACTAGTGGTCAACTGTGGTGCTAAACCT
GCCAATGTTTCGAGCACGTGTTTTAAGAAACCCAATTTCTGTTTATTCAA
CATCATCGACGATCCTTGCGAATATCATGATTTGTCAGGCAAATATCCTG
AACTTCTGGAAACGATGAAGAAAAGATTACAATTTTATGAAGATAGTGCA
GTTCCACCAAGAAGAAATGAGACAGGGGACCCCAGAGCAAACCCAAAGCT
CCATAACGGTGTATGGGTACCTTGGATCACTCTACCTTAAAACCAAAGTC
AAGAAATTGATTCTTAAAAGGATTATTGTTATTCGTAAGGTTTGTAGGGT
CCTAGACCTAACACCTAGAGCCACTAAAAAACTGTGCTACATTTCGTCGT
CCATCGATGCATTTTTGAATTTAGACTTTAAAGGGAACGACGCATGGTAT
ATTTATGAAATGCTGATCTAGCATTGGCACAAACACCCATACGGAGGAGT
ATTTAGGAGTGCTGGATCATAACAANNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAA
CGTCTTTGCAATCTTTTTGTTTACATTTTGTCTTCATTCACTTTCGTTTA
CTGTTGAAAACATAACAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNATTACTCCTTATAATTATGTGTAGTTTTTAGAGTTTATGTGT
AAAGAGTTTATTTAGAGTTTAATCGATTCACTTTCACTTCACTGTAGGAA
GGGTTGTCAAGAGCAAGGTGTTAGATTTTCAAAAGAACACACATTATGCT
CAAGAATCAACTTGTTGGTGACGTAATTGAAGTGTGTGTCATTCATTTTC
TCTTTAAATGTATATCTTTAAACTCTCCTCTCCTTTGGACGGTGGGAACC
TTTTTTGAAAATTTTGACTTCGCAATTCCTACTCTTACATATACCTAAAA
GATATATAATGATGACAAAAACAGACGATCTAATCCTTGGGTTGAACATT
TGGTGCATGATAGAACGGAGTAATAAAAAGTGCTATTGATTAATACTTTA
AAACTAACTTTTAGCCTGTAATAAGCCTGTATGATGGCGGAGTACTTTCT
CATATTTTAGAGATACAGACACACAAACTTTTCTACTCAATGACATGCTC
CTAAGCTCGACACACTGATTTTTTATACAAGATGACATCATCGATATGTA
TGCATACTTGATACTGCCAAAAATACAATTAAAATCTAACTGTCATAAGG
TTTTTCTAATCTCCCCATGTTATGATGTTGTCTTTAAATAATTTCTCACC
GTTTTTGACAATTTTTCAGTTTTATTTCATATATGTCATTTTGATACGCA
TTTCAAATTTTTAGATAAATACAATGTGAGTGCGATGTAACTTAGTGAGA
AAACATTTTAATTATAAAGTCTTGTAACAACTTTCTGTCATATGATCTTG
ATCTTTTTGAGCAAGTTTTTTATTTTACGTTCATTGCTAACAATTTTTTT
CAGTTTCAACCTTGTGAACTGTATAAATTTGTTGTAATATCTCCACACAT
AATATTGAGATTTATCTTAATAGACAACTCTTAACACAGGGTAAATAGTT
AAATGACAAAATGAAGGCAATTTTATGGCAATTTTTCTTGGTAGCTTCCC
TCGTTGGTCAAATTTTGTGCGCAGAGAAACCAAACTTTGTTATTATCGTA
GCTGACGACTTGGTAAGAACACGACAAATTGAACCATAGGTAAACCCAAA
AATCTAATAGAAGAAAGGGATGCTATAATCCTGAAGCAAAATCTTAAGAT
CTCAAATGTGCGAACCTTAAGATCTCCAAATTCTGTTGTAATTTTTTACA
AATTCATGAATCGTAGAAATTGAGTCCCTTAATTGAAAGGGGCGTTAATT
CAGGGGTTGGACAATCTCACCATTCTACAACAGACCTATGACCCTGGGCT
TAATAAAATTTGAAAAGCTTTGGTCAATGAGAAAATCCACCTAAACTAAT
TTGTGTTAGCCTTTTCTAATGTCTGCTTTTCCACCAAAGGGATGGAATGA
TGTCAGCTTCCACGGATCAGATCAAATCCCAACACCTAACATTGATAAAT
TGGCAAAAGAAGGAATTATTTTGAATAATTATTATGTTGCACCTATATGC
TCACCATCTCGGAGTGCCATCATGACTGGGAGATACCCTATTCATACAGG
TTGATTATTTTCTTATCAAGTTCATAGGATTTAATTTCAATAAAACACGA
AAATTTCTGTATCATTATTACAAGAAATACCAAGCAAGGTTTTCAAGCTT
GCTAACGTTTAAATTTCAAGTCAGTACTCTCAAACTGACCAGCGCCAGTT
GCAAAAGCCATTGACAAATAAGAAAGAATGAAATGTTTTGAGGGGGTTGG
ATATGGTCTAATTATAGTATTTCTACTTTTGATGTTCAGGTATGCAAGTA
AGCACAATATTTGCATATGACACATGGGGTGTCAGTTTAAATGAAACATT
CTTACCAGAGATTCTCAAAGAACAGGGATATGCAACGCATGCTATCGGCA
AGGTATGTCGTGTATTAACATTCGGAGATTTTTTCATCCTGTGAGAGATG
CTTTTTTTTCTTTGTTTGACTTATTAGTATTGCACGCGTTCTATGATTCG
AGAAGCAATGTTCACAATCTTTTAGAGAGTCAAAGTTGGATCTTCTTGAG
AAATGAATGCACTCTACCCCAAGAATGAAATATATAATCCATAAAATCCA
AACTTTCCGTCATTTTATTTCTTAGTGGCATGTTGGTATGTTTGCGAAAG
AATACACTCCAACATACAGAGGCTTTGATTCGTTTTATGGCTACTACCTT
GGGAAAGCTGATTATTGGGACCACTCCAATAACGAGAAGTACTGGGGGCT
CGATCTACATGACAATTTAGAGGTCAGTGGTCCTGATGTTATTGCCCACT
ACTCCCTTTTGAAATCAAAATTGGTGTCATGAGCTTCGTCAATATTGTTT
GTTTTATGTTCCAGTTGATTCCAACTTCACCTGAGACCTTCAAACAAGGT
AGAAAAGATACTATGAACAATGACACTCATCGAGAAGCTCTAAGGGCTAT
AAGCTCAAAGCTAAGAAATAATTAAGGTTAGGGGGAGGGGCCAATTCTGT
TATTACCGCAATACTGTCTTCCCTGAGTTTTACTGGAGCGTCCGAAGATA
TCACCAGTATCAGTACTTTCCTGCTATTAATAACTTTCTGATTTTTTTGT
CATTTTAGCCTGTATGGACACAATGGGGTAACTACAGTACGGAGATGTAT
ACAGCAGAAGCAGAAGGTCGTATACACAATCATGACCAATCGAAACCACT
TTTCTTATACCTCGCATATCAAGCGGTTCACAGTGCTAATAGGGATGCAG
ATGCACTGCAAGCCCCCGATTCATGGATACGAAAGTACAATCACATTCAG
CACGAAGGACGTAGAAAATTTGCAGCCATGATGGGTTATATGGATTATGG
CATTGGAAGGGTAGGAAGCAAAAACGTTTGTAACATTTGGTCGACTAACC
ACCATATGAATTCTGGGAATTAAAAAACAAAAGACTAATGCCACTCTACT
GTCAGCTACATTTCTAGCCAAACGTTGTAAAAAGAAAGTAATTATTTTCT
TTGAAGTTCAAACCTTTCGATACAAAACTTCGAAGCATTGACTTACTTTC
TTGTAACCGCAGGTCCACGATGCTCTTGTAAAGACAGGCATGATCAACAA
TACAGTCATCATTTTCACCACAGATAACGGAGGTCCTGCTAATGGTTTTG
ACCAAAACTGGGCAAATAATTTCCCTTTAAGAGGTGTCAAGGCTACACTA
TGGGAAGGTACGGCCCCTGCAAATGTTCATTAGACTTCTCTCTTTAATAC
CCATAAAGGGTGTAAAAAGATTCTTGAAAATGCCCCCCCCCCCCGGGAAA
AGGCGAAAATCTGTGAGATACCCTTGCAAAATTTATCTTCTTGATATCAT
TAAAGTGAGGGTAGAGGAACTAAAATCAGTTTTTCACCCCTGGAATTTTC
GGAATAACGTTAACCCTTTAGAAATACGAATAAGCTTTCGGGGGGGGGGG
GGGCATTTTAAAAAAGCTTTTTCCCCCCTTTTTTTTTAAAAAACCCCCCC
CCCCCCTGGAAAATGTCAAAATTTGAAAAAATCACTTTCAAAATTTTTTT
TTTTTTTTAAAAAACCCCCCCCCCCCCTGGAAAATGTCAAAATCTGTGAG
ATACCCTTGCAAAATTTATCTTCTTGATATCATTAAAGTGAGGGTAGAGG
AACTAAAATCAGTTTTTCACCCCTGGAATTTTCGGAATAACGTTAACCCT
TTAGAAATACGAATAAGCTTTCATTCGACCGCCTGGACATTTTTCTTACA
TTACCCGCTGGAAACGATCCTCCAATGGAATGCTATTTCGGCGTCCACCT
AACGGTTTATAGATGTCATTTAGTTGATACTGCATGATTTCATAGTCGAA
TTTAAAAGCTCAAAATTATTCTTTTTGGCTTTATCAACTTTAACATTTAT
ATTGATGTTTTTTCTTTAAAAGACTTTTTCAGAAAGTCAAAAAACCGGTG
CATAAATTTATGTTGATCCCTTGGATGTTGAAACTGAAGGTCCTTACTCT
CTTTCACAATCTTCTAGGAGGTGTGCGAGCGGCTGGATTTGTGCATAGCA
ATTTGTTAAAGAAGCCAGGCCGAACATCCATGGACTTAATACACATTACC
GATTGGGTTCCAACGCTGGTCAATTTAGCAGGTGGATCTTCAAAAGCTCC
CTTTGATGGTGTGGATCAATGGTCCTGTTTATCTGAAGGTCTACCTTCTG
CAAGAGAAGAGATTTTGTTGAATATTGATAACGATCGATGGATGAATAAA
GCTCTGCGAATGGGAGATTGGAAAATTATACAAGAAAGTATGATGCATTT
TATTCTTTTTTTTCATATTGTCTATGATATAGGTTGGTTGCTGAGCTAAA
TGATTATTAGTCCATGAGCTGGGGGTCAAAATAGGCTTAATGAACCCGAA
ATCTTTCGATTCCATACGTCTTGACCTTGGTAACATAGAAATTTCCACTC
TACATAAAATTTGGAAACGTTTGGTATATAATATGTCTGGTAACCTCGTT
GAGCCCAAAGTCTCAAAATTTGACCCTCAGCTCATGGGCCATATTGTTGA
GAACTTTCTTCAATAGCTTTTAAAAATGACAGAAAAGATTGTGCTCTTCT
TTGTTTATCCTTTTTAGCTGGCACATGGGACGGTTGGTATGCCCCACCAG
GGGTTATTGGTATGGAAAACACAAATCTGGTTGACGACACTTATATCACA
TTCCAAAGTCAACCAGTGGTCAATTGTGGTGAAAAACCTGCCAATGTTTC
GAGCACGTGTTTTAAGAAACCCAATTTCTGTTTATTCAACATCATCGACG
ATCCTTGCGAATATCATGATTTGTCAGGCAAATATCCTGAACTTCTGGAA
ACAATGAAGAAAAGATTGCAATTTTATGAGGATAGTGCAGTTCCACCAAG
AAGAAATGAGACAGGAGATCCCAGAGCAAACCCAAAGCTCCATAATGGTG
TATGGGTACCTTGGATTACTCTACCTTAAATCTCACAGAAAGCAAAAAGT
CAAAATATTAAATGAAAATATCATTAATTGTAGAGCTGGTAGGATCATAA
TTAAAACCTGACATCTAATGTCATCTAGTTTTAGACGTAGTTCTATATTC
GTCGTCGAACGATGTATTTTATATTTTAACATTCCTTGTATTCCTTGTAA
ACATGTGTTGTTTGTAGCGTTGATGGATAAAGTTTATCAAGAATTCAACC
CTTCCACTGGCAATCCCAAAGTGTTGGATTTTAAGGAATCAGTCAAAAAG
AACTTTTTTGCAGCTACAGATATAAAGAGCATTCGAAAAATTGTCTTTAA
T

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_005176	XLOC_005176	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000091	supercontig	sc0000091:32902..43902 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.295481	0	0	0	0	0	0	0.364356	0	0	0.519362	0.572803	0	0.190875	0.630494	1.12074	0.383446	1.22744	0.214997	0	5.10364	5.16915	2.29357	3.05965	1.23954	1.92793	0	1.84491e-08	0	1.59228

Blast

[Close]

BLAST of TCONS_00009219 vs. Swiss-Prot (Human)
Match: ARSB (Arylsulfatase B OS=Homo sapiens GN=ARSB PE=1 SV=1)

HSP 1 Score: 374.785 bits (961), Expect = 4.241e-121
Identity = 222/532 (41.73%), Postives = 293/532 (55.08%), Query Frame = 3

Query:  180 CAEKPNFVIIVADDLGWNDVSFHGSDQIPTPNIDKLAKEGIILNNYYVAPICSPSRSAIMTGRYPIHTGMQESTVFASDTWGVGLNETFLPEILKEQGYSTHAVGKWHVGMFAKEYTPTYRGFDSFYGYYLGKADYWDHSN-------NEKYWGLDLHDNFEPVWTQWGN-YSTEMYTAEAEGRIHNHDQSKPLFLYLAYQAVHSANRDADALQAPDSWIRKYNHIQHEGRRKFAAMMGYMDYGIGRVHDALVKTGMINNTVIIFTTDNGGPANGFDQNWANNFPLRGVKATLWEGGVRAAGFVHSNLLKKPGRTSMDLIHITDWVPTLVNLAGGSSKA--PFDGVDQWSCLSEGLPSAREEILLNIDN----------------------------DRWMNKALRMGDWKIIQETGTWDGWYAPPGVIGMENTNLVDDTYITFQSQPVVNCGEKPANVSSTCFKKPNFCLFNIIDDPCEYHDLSGKYPELLETMKKRLQFYEDSAVPPRRNETGDPRANPKLHNGVWVPWI 1661
             +  P+ V ++ADDLGWNDV FHGS +I TP++D LA  G++L+NYY  P+C+PSRS ++TGRY I TG+Q   ++      V L+E  LP++LKE GY+TH VGKWH+GM+ KE  PT RGFD+++GY LG  DY+ H         N     LD  D  E V T + N YST ++T  A   I NH   KPLFLYLA Q+VH      + LQ P+ +++ Y+ IQ + R  +A M+  MD  +G V  AL  +G+ NNTV IF+TDNGG       NW    PLRG K +LWEGGVR  GFV S LLK+ G  + +LIHI+DW+PTLV LA G +    P DG D W  +SEG PS R E+L NID                             +  ++ A+R G+WK++        W+ PP                   SQ   N  E P++   T        LF+I  DP E HDLS +YP ++  +  RLQFY   +V P      DPR +PK   GVW PW+
Sbjct:   41 ASRPPHLVFLLADDLGWNDVGFHGS-RIRTPHLDALAAGGVLLDNYYTQPLCTPSRSQLLTGRYQIRTGLQHQIIWPCQPSCVPLDEKLLPQLLKEAGYTTHMVGKWHLGMYRKECLPTRRGFDTYFGYLLGSEDYYSHERCTLIDALNVTRCALDFRDG-EEVATGYKNMYSTNIFTKRAIALITNHPPEKPLFLYLALQSVH------EPLQVPEEYLKPYDFIQDKNRHHYAGMVSLMDEAVGNVTAALKSSGLWNNTVFIFSTDNGGQTLAGGNNW----PLRGRKWSLWEGGVRGVGFVASPLLKQKGVKNRELIHISDWLPTLVKLARGHTNGTKPLDGFDVWKTISEGSPSPRIELLHNIDPNFVDSSPCPRNSMAPAKDDSSLPEYSAFNTSVHAAIRHGNWKLLTGYPGCGYWFPPP-------------------SQ--YNVSEIPSSDPPT----KTLWLFDIDRDPEERHDLSREYPHIVTKLLSRLQFYHKHSV-PVYFPAQDPRCDPKA-TGVWGPWM 533

The following BLAST results are available for this feature:

BLAST of TCONS_00009219 vs. Swiss-Prot (Human)

BLAST of TCONS_00009219 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
ARSB	4.241e-121	41.73	Arylsulfatase B OS=Homo sapiens GN=ARSB PE=1 SV=1	[more]

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TCONS_00009219 (transcript) - C. hemisphaerica

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