TCONS_00009215 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009215
Unique NameTCONS_00009215
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1655

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009215 ID=TCONS_00009215|Name=TCONS_00009215|organism=Clytia hemisphaerica|type=transcript|length=1655bp
TACACAGGTTGTGATAATGGGAGTGAATCGCTTTTTTCTGGTCCTTCTCT
TAGGGCATTGTAGTTTGGCAGTACCCTGGGGAATCAAACTTCGAAATGGA
AAAATCTACCCACGCCCAGGAAGAGGATTGTACTCTACCGAACAAATTGA
GAATGGGAAAGGGCAAGAACTGGACATGCTTTTCAAAGATGGAATAAACC
CATTCAAAGCAAGTGGACCCAGAGCACGAAGAGCTGTTCTTGTTTTTGAG
GGATTGAAATGGCCAAATTCCATTGTTCCTTACAGATTCGCGGAGGAAAA
TCCACTTTCTCCATCTTTACGAACAAAGACTTTGGAAGGAATGAAGAGAA
TTGAAGAGACAACATGTGTTCGATTTGTCGAACAAACAACTGAAAACGAT
TACGTCATAATTGATGCAAAAGACAATGCGTGTTATTCATTCGTCGGGCG
TATTGGCGGTGCACAACGCCTGAACATGGGCGAAGGGTGCAACTCAGTAG
CGATTGCGATACATGAGCTGATGCACGCTCTTTCTTTTGTACACGAACAC
AATCGAAATGATCGAGACAAATATGTCATCGTTAAATTGGAAAACATTTT
GTCGGGGGCGGAAAAGTCTTTTGAGAAATACGAAGATTTTGAAATCGACA
TTTTGGAAACTCCTTTTGACAAGCAAAGTGTGATGCACTATTCAAACTTT
GCATTCACCAATAAGAATCCTTTCGATGGCGAATCAGCAATGACTTTAAT
CAGTAAAGGACCATTGGGTGCAAATGAAGTTCTTGGGAATTCAGAGGGGT
TGAGTTCTCTTGATATACAGCGTATCAACACCAGATACTGTCAAGGTGCT
ACACCGCAAACTAAAACTCCAACAAAAACTCCACCAGCGACTGAACAGCC
GACAGAAAACCCTGAAACACCTGCCACCGAAGATCCACAAGTTACCACCA
ATCCTGTTACCAAAAATCCTGTGACTGAAAACCCCGTGACTGATGGCGTC
ACAATGGAGCCTTTGACTGAGACACCGGAGCCGTTGACCAAAACAGCCGC
ACCAACCGAAATTCCGCCTAAAACACCTTGTCCTACAAAACGACCCAAAG
AAAAGCGATTGAAAAAGAAAGGCTCGTGGTGGAAACGTATAACTCGTAAA
TGGTGGCAAGGGCGAGGGCGTGGCGGGCGTAAACGTGTGcatcaaaaagt
ttcaagaaagGGCGGCTCAAGACGTGTAATCGGGCGTcatgtcaagaatt
tttttaagaaagcaatatttggaaaataaattttgagaagaAGATTGACT
AATGTACGGCACCATTTTTAGTAAGAATTGCACCTTTTTGCACTTTATAT
ATGCACTTCCACAAGTGGCATATTCTTTCATATATTTAAAAGATTGCAGT
TTTTAGGAGTGTCAAAAACACTGCATTTACAAATGGAACCTTCTTCGCAT
TGTTGGAATCAGTCAAAAGTTCTTTTTCAGCATTTCTGATCTCCTACCTG
ATTTTTGAGCTATAAGTAATGAAATTAAACAAGCAGCCTGTCGGCATTAC
GGCCCAGCTCTCTTTCGGTATCGTCGGGCATCTCGCATCTCTCCATCATT
CCTGCAGATATCAATcagtacttttttttattttcagaccCTACAGTTGA
TATGG
Run BLAST on NCBI

protein sequence of TCONS_00009215-protein

>TCONS_00009215-protein ID=TCONS_00009215-protein|Name=TCONS_00009215-protein|organism=Clytia hemisphaerica|type=polypeptide|length=425bp
TQVVIMGVNRFFLVLLLGHCSLAVPWGIKLRNGKIYPRPGRGLYSTEQIE
NGKGQELDMLFKDGINPFKASGPRARRAVLVFEGLKWPNSIVPYRFAEEN
PLSPSLRTKTLEGMKRIEETTCVRFVEQTTENDYVIIDAKDNACYSFVGR
IGGAQRLNMGEGCNSVAIAIHELMHALSFVHEHNRNDRDKYVIVKLENIL
SGAEKSFEKYEDFEIDILETPFDKQSVMHYSNFAFTNKNPFDGESAMTLI
SKGPLGANEVLGNSEGLSSLDIQRINTRYCQGATPQTKTPTKTPPATEQP
TENPETPATEDPQVTTNPVTKNPVTENPVTDGVTMEPLTETPEPLTKTAA
PTEIPPKTPCPTKRPKEKRLKKKGSWWKRITRKWWQGRGRGGRKRVHQKV
SRKGGSRRVIGRHVKNFFKKAIFGK
Run BLAST on NCBI

transcript from alignment at sc0000091:19245..24482-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009215 ID=TCONS_00009215|Name=TCONS_00009215|organism=Clytia hemisphaerica|type=transcript|length=5238bp|location=Sequence derived from alignment at sc0000091:19245..24482- (Clytia hemisphaerica)
TACACAGGTTGTGATAATGGGAGTGAATCGCTTTTTTCTGGTCCTTCTCT
TAGGTAAGGCTTTATGAATCATTTTTCGGTCCCTTTCAGGACTAAAGTCG
AGTCTCTTCAATTCGAACCTCTATAACTCGAATGTCTTCTTAACTTGAAC
AGGTTTTCTCCTCATCCTTACAGATAACTACTTTAGGCGTAGAAACTTTC
GCGAGCAGAAACTTTCGCGATTTTCGCGAATTTTGGCCCTTTTCGCGAAA
GTAAATGTCTTTAAAAATTCTAGGAAGGGCCATTCGCGAAAGTTTATGCT
CGCGAAATACTCTTGACAAAATAGAAAATCTGTTAAACTTCAAACTTTGA
ATAAAATGTAGCTTTTATGGCACTTTTTAGCCTGCTAAAATACTAATAAG
TCAAAAGACAAATATTTCAAGCCAATCCAAGAAGTATTCGACCCTCTAAG
CCATTTTTTCATGTGAAAATTCTCAATTTTACGTCTTGATTCGCGAAAGT
TTATGCTCGCGAAAAATATTTTTCCGTTAAATTCGCGAAANNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTTTTCCGTTAA
ATTCGCGAAAGTAAATGTCGTGAATTTCGCGATTTTTCGTCCTCGCGAAA
GTTTCTGCTCGCGAAAGTTTGTACGCCTAAAGTATGCCTTATAAACTTTT
CTCAGTAACTCAAAATTTCCTTAATTCGAACAAATTTGTGCTACCCGTGC
GTGTTCGAGTTATGGAGACTCCACTGTATTTAAAAATCGTTAATTTTTTG
TCACGTAAAAGGAGTTTCAGAAACTGTATTCGTATTTTCTTTTAGGGCAT
TGTAGTTTGGCAGTACCCTGGGGAATCAAACTTCGAAATGGAAAAATCTA
CCCACGCCCAGGAAGAGGATTGTACTCTACCGAACAAATTGGTAAGTTAA
AGTGATACTTTTTCACATTTTCAAAACGAATGGCTAGTTTTAAGACCGAT
GATAAGCATTTAGTTTTCATCGTCCAAAGTCGTAACATGCCATCAGCAAC
CCGTACCTTGCTATAATATTAAATATTTAGGCGCCGTTGGAAAGATATTC
TCGACGAAAATAATCTAAAATATTATAGATTATTGATAAATTAGGTAGGA
GAACGAAAATAAAAAGGGAAAGTTTTTTCTACTGGTTAGAAACTAGCAAA
AGCATTTCAGAATATTTAAAACTTTCTGATTTCAAATCTGTATTCAGTCT
TTGCATAGGTCATTTTGGCCATATTTAGCCGCGAGCTTGACTTTTTTTAT
CAATCATTTTTTTAGAGAATGGGAAAGGGCAAGAACTGGACATGCTTTTC
AAAGATGGAATAAACCCATTCAAAGCAAGTGGACCCAGAGCACGAAGAGC
TGTTCTTGTTTTTGAGGGATTGAAATGGCCAAATTCCATTGTTCCTTACA
GATTCGCGGAGGAAAATCCACTTTGTAAGTTAAAAGATTGTCGATTGAGT
CAATTGAGATCTAAGAAATATTCCACATAACATTGAAAACAAAGCACACG
CTTTTTCTACAGTTAACGGACAACTGGATACTAACTAAAACTGCTTACCT
AAAGTCTTTAGAATGATTTTCAGTGTGGACAAAATTTCCCCAAAACTTAA
TATATATCTAACGGGCTACACTACACGATACATTGTCAGGCAATATATTG
ATGATATATTGCTGAGTGTCCGCAATATATTGAAAAGTTGTCCGCAATAT
ATTGTCAGCTCGATTTGCAATTTTCCAACAATATAGAACGATTGTTTACA
GAAAGAAAATTTGTTTTTATGATAGAGTAAAATATTGTTCGTCAATATAT
TGTGTAGTCAAAGTAGCCCTTAACGACTTATTTCTCAATCATCTGACAAA
TTGAGAAATGGGGTCCTCTTAACTCGAGTCTTAGGTTATTGAAAAGCAAA
ACCCGACAAAACAATTTAATCTAAAAATGACTAATACATAATCAAACAGC
TAACACGAGTATTTGTGGGCTGCTGGCCCGATCCACTGTCGGATTTGTAT
TTCTTCTATACTACCTGTGGTTATGTAGAGGTATGTGGTTCAGACACGAG
TATTTGAAAGTGTTTGCTCTTGTTTAGCTCCATCTTTACGAACAAAGACT
TTGGAAGGAATGAAGAGAATTGAAGAGACAACATGTGTTCGATTTGTCGA
ACAAACAACTGAAAACGATTACGTCATAATTGATGCAAAAGACAATGCGT
AAGTGTTTGTACCACATGCAGCACACAACGTCATAATGATGTTCATCTAA
CATTCATAATACCTTAATAATCAAAAATAATCAAAAAGCCTTGCTACAAC
AGATTCATCAGAACCACAAACATCACGTTTTAGTTCTACTGTAGGACCTG
CCATTTTCATTCGCAGTTTTACCAGATCCATCGATTTCACCAGCAAGCAA
ATGAACTAGAGAACTAATAAAGCAATCAGGTTTTTTTCAGATTATTTTTG
CTAAGGGGTGAACATTGGACTTGGGAAATAATTTTGGGTTACCTTATTTT
AGGAAATTCTCATTTTATGTTTTCACATTGGACAATACACGTTCATGTCT
TTCTCACTTATCGTCGAGGTAAAGACACATCCTCGATTGAAAAGTATCTG
ATGCTTTGCTTGACTCTTTTTTCAGGTGTTATTCATTCGTCGGGCGTATT
GGCGGTGCACAACGCCTGAACATGGGCGAAGGGTGCAACTCAGTAGCGAT
TGCGATACATGAGCTGATGCACGCTCTTTCTTTTGTACACGAACACAATC
GAAATGATCGAGACAAATATGTCATCGTTAAATTGGAAAACATTTTGTCG
GGTAAGAAAGTCAAATATTTTTTCAGTATTTCTATTGATATTGTACGCTG
GAAATTGTTTTACAACCTTGGTTTATAAACCCAATGCCTAACCGCTTGCG
CTAACGAGACACGGGAAAGCTGTCATTCAAAAATACTTATAGTGTGTAAT
TTCCAGACCTTAATTAAGAAAGCTCATAACCCTACCGGTGCCCTTACAAG
GATCCCTAAGTTAAGTATCAGGGTAAGATATATTGTGACTCTCGAGCTCC
AACCCTAACCCGAACTGTTAATAACCGAACCCCCGTCTAGTTCCATAGAT
TGAAAAATTTCACTTGCATCTTGGTGGGTGATATCGTCTGCCAACCGCTG
AAAATCGCCAGTTTACAAACTAGGCAAGCATTGCTCTTTACTTTGGCATT
ATATAAATGCGTATTGACTAAAGATAACTGGATTATGTTTCTCCTTCTTC
AGGGGCGGAAAAGTCTTTTGAGAAATACGAAGATTTTGAAATCGACATTT
TGGAAACTCCTTTTGACAAGCAAAGTGTGATGCACTATTCAAAGTGAGTG
ATTTGGCACGTGTGTAATTTGGCTAAAAATTTGTACTGTTACGTTGTAAA
AAGACGATTCATTAATATAATTTTTTTGATCAACAATAAACTACTTTCAG
GGGGTCAGCACTGTGACGACAAATCAAGAATCTATTTATAAGCACGTTCA
ATAAATACAATAGGATATGTGCTTTCAATCTTCGATTCTTTGAAAAGTAA
TACGATACTCGATAAAATTCCGTCTCTATAGGTTAAGTTTTAGAGAAATA
TAAAATGTTCTCTCACGGTATCTGAATTTCCCGTAAATGGAGGATCTTGT
AGAAACATTTATATTTTGTGGTTGACCAATGTTCAAGGCCGTTATTGTAA
TAAACTGACAGCTCCTAGTCCAAAAAGTCCTGCTCTTTCTGTATTTCGTT
CAGTTCAAACCCAGGGGAAGGGTAAAAATGGGTGCCGGGTATGTGCGAGC
CGGGTCCCTTTTTCACACCCTCGAAAGTCTCTCAAAGGAGTACAAAAACC
ATTAAAAAGAGAATTGAGTCTCTGCAAGAGTCCAAAAATCTCTCGAAGGG
TCGTGATTTTTCCAAAATTTGGACAAAAATCGAGTGAAAATCGATAAAAG
ATTTGAGAAAAGTCTCTCATAGGGTCCCAAAAACACCAATTTTTTACAAT
GACTTTGTTTTCAATTCTTTCCAGCTTTGCATTCACCAATAAGAATCCTT
TCGATGGCGAATCAGCAATGACTTTAATCAGTAAAGGACCATTGGGTGCA
AATGAAGTTCTTGGGAATTCAGAGGGGTTGAGTTCTCTTGATATACAGCG
TATCAACACCAGGTATGTTTTACATTAAGCATGTTGTAAACTTTTTTTAG
CGTTGATTAGTAGTTGATGATTGAAATATCTTGAATTGTGCTCGACTTTG
AACCATTGATGTACGTCTCAATTCGGTTCCTTTGGAAATAAATCCAACCT
TGTAACTTCTCTTATAGATACTGTCAAGGTGCTACACCGCAAACTAAAAC
TCCAACAAAAACTCCACCAGCGACTGAACAGCCGACAGAAAACCCTGAAA
CACCTGCCACCGAAGATCCACAAGTTACCACCAATCCTGTTACCAAAAAT
CCTGTGACTGAAAACCCCGTGACTGATGGCGTCACAATGGAGCCTTTGAC
TGAGACACCGGAGCCGTTGACCAAAACAGCCGCACCAACCGAAATTCCGC
CTAAAACACCTTGTCCTACAAAACGACCCAAAGAAAAGCGATTGAAAAAG
AAAGGCTCGTGGTGGAAACGTATAACTCGTAAATGGTGGCAAGGGCGAGG
GCGTGGCGGGCGTAAACGTGTGCATCAAAAAGTTTCAAGAAAGGGCGGCT
CAAGACGTGTAATCGGGCGTCATGTCAAGAATTTTTTTAAGAAAGCAATA
TTTGGAAAATAAATTTTGAGAAGAAGATTGACTAATGTACGGCACCATTT
TTAGTAAGAATTGCACCTTTTTGCACTTTATATATGCACTTCCACAAGTG
GCATATTCTTTCATATATTTAAAAGATTGCAGTTTTTAGGAGTGTCAAAA
ACACTGCATTTACAAATGGAACCTTCTTCGCATTGTTGGAATCAGTCAAA
AGTTCTTTTTCAGCATTTCTGATCTCCTACCTGATTTTTGAGCTATAAGT
AATGAAATTAAACAAGCAGCCTGTCGGCATTACGGCCCAGCTCTCTTTCG
GTATCGTCGGGCATCTCGCATCTCTCCATCATTCCTGCAGATATCAATCA
GTACTTTTTTTTATTTTCAGACCCTACAGTTGATATGG

Coding sequence (CDS) from alignment at sc0000091:19245..24482-

>TCONS_00009215 ID=TCONS_00009215|Name=TCONS_00009215|organism=Clytia hemisphaerica|type=CDS|length=10224bp|location=Sequence derived from alignment at sc0000091:19245..24482- (Clytia hemisphaerica)
ATACTGTCAAGGTGCTACACCGCAAACTAAAACTCCAACAAAAACTCCAC
CAGCGACTGAACAGCCGACAGAAAACCCTGAAACACCTGCCACCGAAGAT
CCACAAGTTACCACCAATCCTGTTACCAAAAATCCTGTGACTGAAAACCC
CGTGACTGATGGCGTCACAATGGAGCCTTTGACTGAGACACCGGAGCCGT
TGACCAAAACAGCCGCACCAACCGAAATTCCGCCTAAAACACCTTGTCCT
ACAAAACGACCCAAAGAAAAGCGATTGAAAAAGAAAGGCTCGTGGTGGAA
ACGTATAACTCGTAAATGGTGGCAAGGGCGAGGGCGTGGCGGGCGTAAAC
GTGTGCATCAAAAAGTTTCAAGAAAGGGCGGCTCAAGACGTGTAATCGGG
CGTCATGTCAAGAATTTTTTTAAGAAAGCAATATTTGGAAAATAACTTTG
CATTCACCAATAAGAATCCTTTCGATGGCGAATCAGCAATGACTTTAATC
AGTAAAGGACCATTGGGTGCAAATGAAGTTCTTGGGAATTCAGAGGGGTT
GAGTTCTCTTGATATACAGCGTATCAACACCAGGGGCGGAAAAGTCTTTT
GAGAAATACGAAGATTTTGAAATCGACATTTTGGAAACTCCTTTTGACAA
GCAAAGTGTGATGCACTATTCAAAGTGTTATTCATTCGTCGGGCGTATTG
GCGGTGCACAACGCCTGAACATGGGCGAAGGGTGCAACTCAGTAGCGATT
GCGATACATGAGCTGATGCACGCTCTTTCTTTTGTACACGAACACAATCG
AAATGATCGAGACAAATATGTCATCGTTAAATTGGAAAACATTTTGTCGG
CTCCATCTTTACGAACAAAGACTTTGGAAGGAATGAAGAGAATTGAAGAG
ACAACATGTGTTCGATTTGTCGAACAAACAACTGAAAACGATTACGTCAT
AATTGATGCAAAAGACAATGCAGAATGGGAAAGGGCAAGAACTGGACATG
CTTTTCAAAGATGGAATAAACCCATTCAAAGCAAGTGGACCCAGAGCACG
AAGAGCTGTTCTTGTTTTTGAGGGATTGAAATGGCCAAATTCCATTGTTC
CTTACAGATTCGCGGAGGAAAATCCACTTTGGCATTGTAGTTTGGCAGTA
CCCTGGGGAATCAAACTTCGAAATGGAAAAATCTACCCACGCCCAGGAAG
AGGATTGTACTCTACCGAACAAATTGACACAGGTTGTGATAATGGGAGTG
AATCGCTTTTTTCTGGTCCTTCTCTTAGATACTGTCAAGGTGCTACACCG
CAAACTAAAACTCCAACAAAAACTCCACCAGCGACTGAACAGCCGACAGA
AAACCCTGAAACACCTGCCACCGAAGATCCACAAGTTACCACCAATCCTG
TTACCAAAAATCCTGTGACTGAAAACCCCGTGACTGATGGCGTCACAATG
GAGCCTTTGACTGAGACACCGGAGCCGTTGACCAAAACAGCCGCACCAAC
CGAAATTCCGCCTAAAACACCTTGTCCTACAAAACGACCCAAAGAAAAGC
GATTGAAAAAGAAAGGCTCGTGGTGGAAACGTATAACTCGTAAATGGTGG
CAAGGGCGAGGGCGTGGCGGGCGTAAACGTGTGCATCAAAAAGTTTCAAG
AAAGGGCGGCTCAAGACGTGTAATCGGGCGTCATGTCAAGAATTTTTTTA
AGAAAGCAATATTTGGAAAATAACTTTGCATTCACCAATAAGAATCCTTT
CGATGGCGAATCAGCAATGACTTTAATCAGTAAAGGACCATTGGGTGCAA
ATGAAGTTCTTGGGAATTCAGAGGGGTTGAGTTCTCTTGATATACAGCGT
ATCAACACCAGGGGCGGAAAAGTCTTTTGAGAAATACGAAGATTTTGAAA
TCGACATTTTGGAAACTCCTTTTGACAAGCAAAGTGTGATGCACTATTCA
AAGTGTTATTCATTCGTCGGGCGTATTGGCGGTGCACAACGCCTGAACAT
GGGCGAAGGGTGCAACTCAGTAGCGATTGCGATACATGAGCTGATGCACG
CTCTTTCTTTTGTACACGAACACAATCGAAATGATCGAGACAAATATGTC
ATCGTTAAATTGGAAAACATTTTGTCGGCTCCATCTTTACGAACAAAGAC
TTTGGAAGGAATGAAGAGAATTGAAGAGACAACATGTGTTCGATTTGTCG
AACAAACAACTGAAAACGATTACGTCATAATTGATGCAAAAGACAATGCA
GAATGGGAAAGGGCAAGAACTGGACATGCTTTTCAAAGATGGAATAAACC
CATTCAAAGCAAGTGGACCCAGAGCACGAAGAGCTGTTCTTGTTTTTGAG
GGATTGAAATGGCCAAATTCCATTGTTCCTTACAGATTCGCGGAGGAAAA
TCCACTTTGGCATTGTAGTTTGGCAGTACCCTGGGGAATCAAACTTCGAA
ATGGAAAAATCTACCCACGCCCAGGAAGAGGATTGTACTCTACCGAACAA
ATTGACACAGGTTGTGATAATGGGAGTGAATCGCTTTTTTCTGGTCCTTC
TCTTAGATACTGTCAAGGTGCTACACCGCAAACTAAAACTCCAACAAAAA
CTCCACCAGCGACTGAACAGCCGACAGAAAACCCTGAAACACCTGCCACC
GAAGATCCACAAGTTACCACCAATCCTGTTACCAAAAATCCTGTGACTGA
AAACCCCGTGACTGATGGCGTCACAATGGAGCCTTTGACTGAGACACCGG
AGCCGTTGACCAAAACAGCCGCACCAACCGAAATTCCGCCTAAAACACCT
TGTCCTACAAAACGACCCAAAGAAAAGCGATTGAAAAAGAAAGGCTCGTG
GTGGAAACGTATAACTCGTAAATGGTGGCAAGGGCGAGGGCGTGGCGGGC
GTAAACGTGTGCATCAAAAAGTTTCAAGAAAGGGCGGCTCAAGACGTGTA
ATCGGGCGTCATGTCAAGAATTTTTTTAAGAAAGCAATATTTGGAAAATA
ACTTTGCATTCACCAATAAGAATCCTTTCGATGGCGAATCAGCAATGACT
TTAATCAGTAAAGGACCATTGGGTGCAAATGAAGTTCTTGGGAATTCAGA
GGGGTTGAGTTCTCTTGATATACAGCGTATCAACACCAGGGGCGGAAAAG
TCTTTTGAGAAATACGAAGATTTTGAAATCGACATTTTGGAAACTCCTTT
TGACAAGCAAAGTGTGATGCACTATTCAAAGTGTTATTCATTCGTCGGGC
GTATTGGCGGTGCACAACGCCTGAACATGGGCGAAGGGTGCAACTCAGTA
GCGATTGCGATACATGAGCTGATGCACGCTCTTTCTTTTGTACACGAACA
CAATCGAAATGATCGAGACAAATATGTCATCGTTAAATTGGAAAACATTT
TGTCGGCTCCATCTTTACGAACAAAGACTTTGGAAGGAATGAAGAGAATT
GAAGAGACAACATGTGTTCGATTTGTCGAACAAACAACTGAAAACGATTA
CGTCATAATTGATGCAAAAGACAATGCAGAATGGGAAAGGGCAAGAACTG
GACATGCTTTTCAAAGATGGAATAAACCCATTCAAAGCAAGTGGACCCAG
AGCACGAAGAGCTGTTCTTGTTTTTGAGGGATTGAAATGGCCAAATTCCA
TTGTTCCTTACAGATTCGCGGAGGAAAATCCACTTTGGCATTGTAGTTTG
GCAGTACCCTGGGGAATCAAACTTCGAAATGGAAAAATCTACCCACGCCC
AGGAAGAGGATTGTACTCTACCGAACAAATTGACACAGGTTGTGATAATG
GGAGTGAATCGCTTTTTTCTGGTCCTTCTCTTAGATACTGTCAAGGTGCT
ACACCGCAAACTAAAACTCCAACAAAAACTCCACCAGCGACTGAACAGCC
GACAGAAAACCCTGAAACACCTGCCACCGAAGATCCACAAGTTACCACCA
ATCCTGTTACCAAAAATCCTGTGACTGAAAACCCCGTGACTGATGGCGTC
ACAATGGAGCCTTTGACTGAGACACCGGAGCCGTTGACCAAAACAGCCGC
ACCAACCGAAATTCCGCCTAAAACACCTTGTCCTACAAAACGACCCAAAG
AAAAGCGATTGAAAAAGAAAGGCTCGTGGTGGAAACGTATAACTCGTAAA
TGGTGGCAAGGGCGAGGGCGTGGCGGGCGTAAACGTGTGCATCAAAAAGT
TTCAAGAAAGGGCGGCTCAAGACGTGTAATCGGGCGTCATGTCAAGAATT
TTTTTAAGAAAGCAATATTTGGAAAATAACTTTGCATTCACCAATAAGAA
TCCTTTCGATGGCGAATCAGCAATGACTTTAATCAGTAAAGGACCATTGG
GTGCAAATGAAGTTCTTGGGAATTCAGAGGGGTTGAGTTCTCTTGATATA
CAGCGTATCAACACCAGGGGCGGAAAAGTCTTTTGAGAAATACGAAGATT
TTGAAATCGACATTTTGGAAACTCCTTTTGACAAGCAAAGTGTGATGCAC
TATTCAAAGTGTTATTCATTCGTCGGGCGTATTGGCGGTGCACAACGCCT
GAACATGGGCGAAGGGTGCAACTCAGTAGCGATTGCGATACATGAGCTGA
TGCACGCTCTTTCTTTTGTACACGAACACAATCGAAATGATCGAGACAAA
TATGTCATCGTTAAATTGGAAAACATTTTGTCGGCTCCATCTTTACGAAC
AAAGACTTTGGAAGGAATGAAGAGAATTGAAGAGACAACATGTGTTCGAT
TTGTCGAACAAACAACTGAAAACGATTACGTCATAATTGATGCAAAAGAC
AATGCAGAATGGGAAAGGGCAAGAACTGGACATGCTTTTCAAAGATGGAA
TAAACCCATTCAAAGCAAGTGGACCCAGAGCACGAAGAGCTGTTCTTGTT
TTTGAGGGATTGAAATGGCCAAATTCCATTGTTCCTTACAGATTCGCGGA
GGAAAATCCACTTTGGCATTGTAGTTTGGCAGTACCCTGGGGAATCAAAC
TTCGAAATGGAAAAATCTACCCACGCCCAGGAAGAGGATTGTACTCTACC
GAACAAATTGACACAGGTTGTGATAATGGGAGTGAATCGCTTTTTTCTGG
TCCTTCTCTTAGATACTGTCAAGGTGCTACACCGCAAACTAAAACTCCAA
CAAAAACTCCACCAGCGACTGAACAGCCGACAGAAAACCCTGAAACACCT
GCCACCGAAGATCCACAAGTTACCACCAATCCTGTTACCAAAAATCCTGT
GACTGAAAACCCCGTGACTGATGGCGTCACAATGGAGCCTTTGACTGAGA
CACCGGAGCCGTTGACCAAAACAGCCGCACCAACCGAAATTCCGCCTAAA
ACACCTTGTCCTACAAAACGACCCAAAGAAAAGCGATTGAAAAAGAAAGG
CTCGTGGTGGAAACGTATAACTCGTAAATGGTGGCAAGGGCGAGGGCGTG
GCGGGCGTAAACGTGTGCATCAAAAAGTTTCAAGAAAGGGCGGCTCAAGA
CGTGTAATCGGGCGTCATGTCAAGAATTTTTTTAAGAAAGCAATATTTGG
AAAATAACTTTGCATTCACCAATAAGAATCCTTTCGATGGCGAATCAGCA
ATGACTTTAATCAGTAAAGGACCATTGGGTGCAAATGAAGTTCTTGGGAA
TTCAGAGGGGTTGAGTTCTCTTGATATACAGCGTATCAACACCAGGGGCG
GAAAAGTCTTTTGAGAAATACGAAGATTTTGAAATCGACATTTTGGAAAC
TCCTTTTGACAAGCAAAGTGTGATGCACTATTCAAAGTGTTATTCATTCG
TCGGGCGTATTGGCGGTGCACAACGCCTGAACATGGGCGAAGGGTGCAAC
TCAGTAGCGATTGCGATACATGAGCTGATGCACGCTCTTTCTTTTGTACA
CGAACACAATCGAAATGATCGAGACAAATATGTCATCGTTAAATTGGAAA
ACATTTTGTCGGCTCCATCTTTACGAACAAAGACTTTGGAAGGAATGAAG
AGAATTGAAGAGACAACATGTGTTCGATTTGTCGAACAAACAACTGAAAA
CGATTACGTCATAATTGATGCAAAAGACAATGCAGAATGGGAAAGGGCAA
GAACTGGACATGCTTTTCAAAGATGGAATAAACCCATTCAAAGCAAGTGG
ACCCAGAGCACGAAGAGCTGTTCTTGTTTTTGAGGGATTGAAATGGCCAA
ATTCCATTGTTCCTTACAGATTCGCGGAGGAAAATCCACTTTGGCATTGT
AGTTTGGCAGTACCCTGGGGAATCAAACTTCGAAATGGAAAAATCTACCC
ACGCCCAGGAAGAGGATTGTACTCTACCGAACAAATTGACACAGGTTGTG
ATAATGGGAGTGAATCGCTTTTTTCTGGTCCTTCTCTTAGATACTGTCAA
GGTGCTACACCGCAAACTAAAACTCCAACAAAAACTCCACCAGCGACTGA
ACAGCCGACAGAAAACCCTGAAACACCTGCCACCGAAGATCCACAAGTTA
CCACCAATCCTGTTACCAAAAATCCTGTGACTGAAAACCCCGTGACTGAT
GGCGTCACAATGGAGCCTTTGACTGAGACACCGGAGCCGTTGACCAAAAC
AGCCGCACCAACCGAAATTCCGCCTAAAACACCTTGTCCTACAAAACGAC
CCAAAGAAAAGCGATTGAAAAAGAAAGGCTCGTGGTGGAAACGTATAACT
CGTAAATGGTGGCAAGGGCGAGGGCGTGGCGGGCGTAAACGTGTGCATCA
AAAAGTTTCAAGAAAGGGCGGCTCAAGACGTGTAATCGGGCGTCATGTCA
AGAATTTTTTTAAGAAAGCAATATTTGGAAAATAACTTTGCATTCACCAA
TAAGAATCCTTTCGATGGCGAATCAGCAATGACTTTAATCAGTAAAGGAC
CATTGGGTGCAAATGAAGTTCTTGGGAATTCAGAGGGGTTGAGTTCTCTT
GATATACAGCGTATCAACACCAGGGGCGGAAAAGTCTTTTGAGAAATACG
AAGATTTTGAAATCGACATTTTGGAAACTCCTTTTGACAAGCAAAGTGTG
ATGCACTATTCAAAGTGTTATTCATTCGTCGGGCGTATTGGCGGTGCACA
ACGCCTGAACATGGGCGAAGGGTGCAACTCAGTAGCGATTGCGATACATG
AGCTGATGCACGCTCTTTCTTTTGTACACGAACACAATCGAAATGATCGA
GACAAATATGTCATCGTTAAATTGGAAAACATTTTGTCGGCTCCATCTTT
ACGAACAAAGACTTTGGAAGGAATGAAGAGAATTGAAGAGACAACATGTG
TTCGATTTGTCGAACAAACAACTGAAAACGATTACGTCATAATTGATGCA
AAAGACAATGCAGAATGGGAAAGGGCAAGAACTGGACATGCTTTTCAAAG
ATGGAATAAACCCATTCAAAGCAAGTGGACCCAGAGCACGAAGAGCTGTT
CTTGTTTTTGAGGGATTGAAATGGCCAAATTCCATTGTTCCTTACAGATT
CGCGGAGGAAAATCCACTTTGGCATTGTAGTTTGGCAGTACCCTGGGGAA
TCAAACTTCGAAATGGAAAAATCTACCCACGCCCAGGAAGAGGATTGTAC
TCTACCGAACAAATTGACACAGGTTGTGATAATGGGAGTGAATCGCTTTT
TTCTGGTCCTTCTCTTAGATACTGTCAAGGTGCTACACCGCAAACTAAAA
CTCCAACAAAAACTCCACCAGCGACTGAACAGCCGACAGAAAACCCTGAA
ACACCTGCCACCGAAGATCCACAAGTTACCACCAATCCTGTTACCAAAAA
TCCTGTGACTGAAAACCCCGTGACTGATGGCGTCACAATGGAGCCTTTGA
CTGAGACACCGGAGCCGTTGACCAAAACAGCCGCACCAACCGAAATTCCG
CCTAAAACACCTTGTCCTACAAAACGACCCAAAGAAAAGCGATTGAAAAA
GAAAGGCTCGTGGTGGAAACGTATAACTCGTAAATGGTGGCAAGGGCGAG
GGCGTGGCGGGCGTAAACGTGTGCATCAAAAAGTTTCAAGAAAGGGCGGC
TCAAGACGTGTAATCGGGCGTCATGTCAAGAATTTTTTTAAGAAAGCAAT
ATTTGGAAAATAACTTTGCATTCACCAATAAGAATCCTTTCGATGGCGAA
TCAGCAATGACTTTAATCAGTAAAGGACCATTGGGTGCAAATGAAGTTCT
TGGGAATTCAGAGGGGTTGAGTTCTCTTGATATACAGCGTATCAACACCA
GGGGCGGAAAAGTCTTTTGAGAAATACGAAGATTTTGAAATCGACATTTT
GGAAACTCCTTTTGACAAGCAAAGTGTGATGCACTATTCAAAGTGTTATT
CATTCGTCGGGCGTATTGGCGGTGCACAACGCCTGAACATGGGCGAAGGG
TGCAACTCAGTAGCGATTGCGATACATGAGCTGATGCACGCTCTTTCTTT
TGTACACGAACACAATCGAAATGATCGAGACAAATATGTCATCGTTAAAT
TGGAAAACATTTTGTCGGCTCCATCTTTACGAACAAAGACTTTGGAAGGA
ATGAAGAGAATTGAAGAGACAACATGTGTTCGATTTGTCGAACAAACAAC
TGAAAACGATTACGTCATAATTGATGCAAAAGACAATGCAGAATGGGAAA
GGGCAAGAACTGGACATGCTTTTCAAAGATGGAATAAACCCATTCAAAGC
AAGTGGACCCAGAGCACGAAGAGCTGTTCTTGTTTTTGAGGGATTGAAAT
GGCCAAATTCCATTGTTCCTTACAGATTCGCGGAGGAAAATCCACTTTGG
CATTGTAGTTTGGCAGTACCCTGGGGAATCAAACTTCGAAATGGAAAAAT
CTACCCACGCCCAGGAAGAGGATTGTACTCTACCGAACAAATTGACACAG
GTTGTGATAATGGGAGTGAATCGCTTTTTTCTGGTCCTTCTCTTAGATAC
TGTCAAGGTGCTACACCGCAAACTAAAACTCCAACAAAAACTCCACCAGC
GACTGAACAGCCGACAGAAAACCCTGAAACACCTGCCACCGAAGATCCAC
AAGTTACCACCAATCCTGTTACCAAAAATCCTGTGACTGAAAACCCCGTG
ACTGATGGCGTCACAATGGAGCCTTTGACTGAGACACCGGAGCCGTTGAC
CAAAACAGCCGCACCAACCGAAATTCCGCCTAAAACACCTTGTCCTACAA
AACGACCCAAAGAAAAGCGATTGAAAAAGAAAGGCTCGTGGTGGAAACGT
ATAACTCGTAAATGGTGGCAAGGGCGAGGGCGTGGCGGGCGTAAACGTGT
GCATCAAAAAGTTTCAAGAAAGGGCGGCTCAAGACGTGTAATCGGGCGTC
ATGTCAAGAATTTTTTTAAGAAAGCAATATTTGGAAAATAACTTTGCATT
CACCAATAAGAATCCTTTCGATGGCGAATCAGCAATGACTTTAATCAGTA
AAGGACCATTGGGTGCAAATGAAGTTCTTGGGAATTCAGAGGGGTTGAGT
TCTCTTGATATACAGCGTATCAACACCAGGGGCGGAAAAGTCTTTTGAGA
AATACGAAGATTTTGAAATCGACATTTTGGAAACTCCTTTTGACAAGCAA
AGTGTGATGCACTATTCAAAGTGTTATTCATTCGTCGGGCGTATTGGCGG
TGCACAACGCCTGAACATGGGCGAAGGGTGCAACTCAGTAGCGATTGCGA
TACATGAGCTGATGCACGCTCTTTCTTTTGTACACGAACACAATCGAAAT
GATCGAGACAAATATGTCATCGTTAAATTGGAAAACATTTTGTCGGCTCC
ATCTTTACGAACAAAGACTTTGGAAGGAATGAAGAGAATTGAAGAGACAA
CATGTGTTCGATTTGTCGAACAAACAACTGAAAACGATTACGTCATAATT
GATGCAAAAGACAATGCAGAATGGGAAAGGGCAAGAACTGGACATGCTTT
TCAAAGATGGAATAAACCCATTCAAAGCAAGTGGACCCAGAGCACGAAGA
GCTGTTCTTGTTTTTGAGGGATTGAAATGGCCAAATTCCATTGTTCCTTA
CAGATTCGCGGAGGAAAATCCACTTTGGCATTGTAGTTTGGCAGTACCCT
GGGGAATCAAACTTCGAAATGGAAAAATCTACCCACGCCCAGGAAGAGGA
TTGTACTCTACCGAACAAATTGACACAGGTTGTGATAATGGGAGTGAATC
GCTTTTTTCTGGTCCTTCTCTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005175XLOC_005175Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009215-exon-sc0000091-1575043694:24430..24482TCONS_00009215-exon-sc0000091-1575043694:24430..24482Clytia hemisphaericaexon
TCONS_00009215-exon-sc0000091-1575043694:23492..23587TCONS_00009215-exon-sc0000091-1575043694:23492..23587Clytia hemisphaericaexon
TCONS_00009215-exon-sc0000091-1575043694:22959..23117TCONS_00009215-exon-sc0000091-1575043694:22959..23117Clytia hemisphaericaexon
TCONS_00009215-exon-sc0000091-1575043694:22185..22305TCONS_00009215-exon-sc0000091-1575043694:22185..22305Clytia hemisphaericaexon
TCONS_00009215-exon-sc0000091-1575043694:21582..21757TCONS_00009215-exon-sc0000091-1575043694:21582..21757Clytia hemisphaericaexon
TCONS_00009215-exon-sc0000091-1575043694:21040..21130TCONS_00009215-exon-sc0000091-1575043694:21040..21130Clytia hemisphaericaexon
TCONS_00009215-exon-sc0000091-1575043694:20221..20358TCONS_00009215-exon-sc0000091-1575043694:20221..20358Clytia hemisphaericaexon
TCONS_00009215-exon-sc0000091-1575043694:19245..20065TCONS_00009215-exon-sc0000091-1575043694:19245..20065Clytia hemisphaericaexon
TCONS_00009215-exon-sc0000091-1510915933:24430..24482TCONS_00009215-exon-sc0000091-1510915933:24430..24482Clytia hemisphaericaexon
TCONS_00009215-exon-sc0000091-1510915933:23492..23587TCONS_00009215-exon-sc0000091-1510915933:23492..23587Clytia hemisphaericaexon
TCONS_00009215-exon-sc0000091-1510915933:22959..23117TCONS_00009215-exon-sc0000091-1510915933:22959..23117Clytia hemisphaericaexon
TCONS_00009215-exon-sc0000091-1510915933:22185..22305TCONS_00009215-exon-sc0000091-1510915933:22185..22305Clytia hemisphaericaexon
TCONS_00009215-exon-sc0000091-1510915933:21582..21757TCONS_00009215-exon-sc0000091-1510915933:21582..21757Clytia hemisphaericaexon
TCONS_00009215-exon-sc0000091-1510915933:21040..21130TCONS_00009215-exon-sc0000091-1510915933:21040..21130Clytia hemisphaericaexon
TCONS_00009215-exon-sc0000091-1510915933:20221..20358TCONS_00009215-exon-sc0000091-1510915933:20221..20358Clytia hemisphaericaexon
TCONS_00009215-exon-sc0000091-1510915933:19245..20065TCONS_00009215-exon-sc0000091-1510915933:19245..20065Clytia hemisphaericaexon
TCONS_00009215-exon-sc0000091-1491911889:24430..24482TCONS_00009215-exon-sc0000091-1491911889:24430..24482Clytia hemisphaericaexon
TCONS_00009215-exon-sc0000091-1491911889:23492..23587TCONS_00009215-exon-sc0000091-1491911889:23492..23587Clytia hemisphaericaexon
TCONS_00009215-exon-sc0000091-1491911889:22959..23117TCONS_00009215-exon-sc0000091-1491911889:22959..23117Clytia hemisphaericaexon
TCONS_00009215-exon-sc0000091-1491911889:22185..22305TCONS_00009215-exon-sc0000091-1491911889:22185..22305Clytia hemisphaericaexon
TCONS_00009215-exon-sc0000091-1491911889:21582..21757TCONS_00009215-exon-sc0000091-1491911889:21582..21757Clytia hemisphaericaexon
TCONS_00009215-exon-sc0000091-1491911889:21040..21130TCONS_00009215-exon-sc0000091-1491911889:21040..21130Clytia hemisphaericaexon
TCONS_00009215-exon-sc0000091-1491911889:20221..20358TCONS_00009215-exon-sc0000091-1491911889:20221..20358Clytia hemisphaericaexon
TCONS_00009215-exon-sc0000091-1491911889:19245..20065TCONS_00009215-exon-sc0000091-1491911889:19245..20065Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009215-proteinTCONS_00009215-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000091supercontigsc0000091:19245..24482 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.147211	0.358884	0.215604	0.271783	0.0330869	0.0784372	0.0630875	0.0885926	2.5522	0.989503	2.47834	2.51029	9.26817	10.1003	0.0417955	0.029902	0.562383	0.613431	18.1159	13.482	4.19908	3.64861	1.07414	2.16764	2.48419	5.90742	0.247985	0.238743	0.31544	0.221961
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001506Peptidase_M12A
IPR006026Peptidase_Metallo
IPR024079MetalloPept_cat_dom
IPR034035Astacin-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity
GO:0008237metallopeptidase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0008270 zinc ion binding
Blast
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BLAST of TCONS_00009215 vs. Swiss-Prot (Human)
Match: TLL2 (Tolloid-like protein 2 OS=Homo sapiens GN=TLL2 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.663e-27
Identity = 70/212 (33.02%), Postives = 101/212 (47.64%), Query Frame = 2 
Query:  206 KASGPRARRAVLVFEGLKWPNSIVPYRFAEENPLSPSLRTKTLEGMKRIEETTCVRFVEQTTENDYVIIDAKDNACYSFVGRIGGA-QRLNMGEGCNSVAIAIHELMHALSFVHEHNRNDRDKYVIVKLENILSGAEKSFEKYEDFEIDILETPFDKQSVMHYSNFAFTNKNPFDGESAMTLISKGPLGANEVLGNSEGLSSLDIQRINTRY 838
            K   PR RRA        WP  ++PY        + S R    + M+  E+ TCV F+E+T E  +++   +   C S+VGR GG  Q +++G+ C+   I  HEL H + F HEH R DRD++V +  ENI  G E +F K E  E+  L   +D  S+MHY+   F+     D      L  +   G    +G    LS  DI +    Y
Sbjct:  141 KTFSPRVRRATTSRTERIWPGGVIPYVIG--GNFTGSQRAIFKQAMRHWEKHTCVTFIERTDEESFIVFSYRTCGCCSYVGRRGGGPQAISIGKNCDKFGIVAHELGHVVGFWHEHTRPDRDQHVTIIRENIQPGQEYNFLKMEAGEVSSLGETYDFDSIMHYARNTFSRGVFLD----TILPRQDDNGVRPTIGQRVRLSQGDIAQARKLY 346
The following BLAST results are available for this feature:
BLAST of TCONS_00009215 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TLL21.663e-2733.02Tolloid-like protein 2 OS=Homo sapiens GN=TLL2 PE=... [more]
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