TCONS_00008750 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008750
Unique NameTCONS_00008750
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1993

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008750 ID=TCONS_00008750|Name=TCONS_00008750|organism=Clytia hemisphaerica|type=transcript|length=1993bp
ATTGAAAATGATACTTAGATGACAAAGTATAGACAATAAGAGCCTTACGC
TACATTAAAATAGTTAcacaaacaaataattttggtaTTAACAGTCAGAG
CATTTCACAATTTTAAGAACTACCTCCAGAATTACctctcaaaattaatt
tcattatgatGACTGACTGATTAATTTAGAATATAGTTTGCTTCTGTTTG
CTTTctataatttgttaaaattacCTAGCCAAAGAATTCATCTATATAAA
TTTGTTCAAGATTATCTACtgtactgtaagttggtctaatctcgacatcc
gtcttctaatttcgacacccttctttagagataggaataatatgaaagtt
gcaattggtgattgaaaaatagtcttaccactaagcaaagaaaaatagtt
tcgacctttctattattttcagctctagaaaagggtgttgaatttagatg
agggatgtcgacattagaccaagttacggtaagcAATAGTTTTTTCATTT
GCCAGAAACCAGTCTTGCCAAATTAAAAATATGGCACACTGTTTTAAAAG
TAATATCCAAGCTTTCAATACTCTTTCCATTTTTAGCCAATTGAATGTAC
gttatttttgtaaatctcAGATTCTGTCCATGAGATGGCAGATGGCGCTT
ATTTAGTCAATGACCCAGGTATAATCAATTGTATATTTTAGTCCACTTTC
TACGGTTGAGGTaccaaatattttcatatatacGCTGATGCAATAACCCT
CACAATTTCATTTTGTAGCCTGCTGTGAGCTCTGTCTCTAGTGACAGTGT
GAACAATACATTATCCAAATTTTAAGATATATTCCAAATATTGTTAGTGT
TAGTAGCAATTTCTTTTCATCATCGCTGTTGATAATTCTAATCTACCAAG
TCAACCAGCCAAGCCACATATATCAAGATATATCCAAAGAATCCATCCAG
TGACAAATTGATTCGGTGTTATAATAAAATAGCCAGATCATCAGAACATC
ATtgcgacaaaatatttttcagcattggGCGTTAGATGTTAGATgtatat
atttcaattctaatCACGATACATATTGTCTGTTGAAGATATCCTTGATT
TGAAGTCACCCATCTGTTTTTGAAATGCCTTTTCATGAGTTTTCAAGGAG
CAGGATATATACAGAATTTATGGttgatgattttgatatttttttatatt
ataggtATATACTGATATATTTTACAcctaaataaattgaaaaaagttat
aTCGAAATCAAATGAGTGATATTAAACCGAATACTTTTCATCTGAGCAAA
CATAAAGCCAGAGCCGTCAACACATCGTCGAAAAGAGTTTCCAAGCCAAA
GCAGATTATCAAATCACCTCAACCGATTGTCAAATCAAAAGATACATCTG
AAGTAGTATTTAAATCACGGGACTGGCGCATGAACGATCCGTCACAGAAA
ATTACTGCCGTAAGAGAAGTTTGTGGTGGACCTGAGCCAATCCAAAAACA
ACTATCATCACAAAATGCACTTCAACCAAAAGGCAAATTGCTAATCCCGA
AGCCCGTACAAATGAAGGGGTATCTTTTTGTTCCGGCGGAATATGTCCAA
TATATGCCTGGCTTTGGATCGCTCGAAATTCCAAAGGTTAAAGACTCTCA
AGACTTTCGGCTGAACAGttcccaatcacaggaaaaaatcaatcGACAGA
TTATCAAGCCAATAAAGAAAGAAGCACCTGTCGATTCGTCCTACGAAAGT
CAATTGGTTGATATCTTTGCATTGCCTACCCCGGTGATCAAAACTAGCTG
CGTTAAAGTTGACAGTGTTGGCAGACTTTgaATATGACGATGATCAGAAG
ATAGACTACAATGAAATCATCCAATTTTGAATTTCCTTtgccaaaaaatt
ttatattttgtattgtaaatagttctttttaaaTTCCTTGGGTATATAtt
tcaattatattttttttaaaccaaacaaaaattcttaaaaccC
Run BLAST on NCBI

protein sequence of TCONS_00008750-protein

>TCONS_00008750-protein ID=TCONS_00008750-protein|Name=TCONS_00008750-protein|organism=Clytia hemisphaerica|type=polypeptide|length=189bp
MSDIKPNTFHLSKHKARAVNTSSKRVSKPKQIIKSPQPIVKSKDTSEVVF
KSRDWRMNDPSQKITAVREVCGGPEPIQKQLSSQNALQPKGKLLIPKPVQ
MKGYLFVPAEYVQYMPGFGSLEIPKVKDSQDFRLNSSQSQEKINRQIIKP
IKKEAPVDSSYESQLVDIFALPTPVIKTSCVKVDSVGRL
Run BLAST on NCBI

transcript from alignment at sc0000087:648630..655826+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008750 ID=TCONS_00008750|Name=TCONS_00008750|organism=Clytia hemisphaerica|type=transcript|length=7197bp|location=Sequence derived from alignment at sc0000087:648630..655826+ (Clytia hemisphaerica)
ATTGAAAATGATACTTAGATGACAAAGTATAGACAATAAGAGCCTTACGC
TACATTAAAATAGTTAcacaaacaaataattttggtaTTAACAGTCAGAG
CATTTCACAATTTTAAGAACTACCTCCAGAATTACctctcaaaattaatt
tcattatgatGACTGACTGATTAATTTAGAATATAGTTTGCTTCTGTTTG
CTTTctataatttgttaaaattacCTAGCCAAAGAATTCATCTATATAAA
TTTGTTCAAGATTATCTACtgtactgtaagttggtctaatctcgacatcc
gtcttctaatttcgacacccttctttagagataggaataatatgaaagtt
gcaattggtgattgaaaaatagtcttaccactaagcaaagaaaaatagtt
tcgacctttctattattttcagctctagaaaagggtgttgaatttagatg
agggatgtcgacattagaccaagttacggtaagcAATAGTTTTTTCATTT
GCCAGAAACCAGTCTTGCCAAATTAAAAATATGGCACACTGTTTTAAAAG
TAATATCCAAGCTTTCAATACTCTTTCCATTTTTAGCCAATTGAATGTAC
gttatttttgtaaatctcAGATTCTGTCCATGAGATGGCAGATGGCGCTT
ATTTAGTCAATGACCCAGGTATAATCAATTGTATATTTTAGTCCACTTTC
TACGGTTGAGGTaccaaatattttcatatatacGCTGATGCAATAACCCT
CACAATTTCATTTTGTAGCCTGCTGTGAGCTCTGTCTCTAGTGACAGTGT
GAACAATACATTATCCAAATTTTAAGATATATTCCAAATATTGTTAGTGT
TAGTAGCAATTTCTTTTCATCATCGCTGTTGATAATTCTAATCTACCAAG
TCAACCAGCCAAGCCACATATATCAAGATATATCCAAAGAATCCATCCAG
TGACAAATTGATTCGGTGTTATAATAAAATAGCCAGATCATCAGAACATC
ATtgcgacaaaatatttttcagcattggGCGTTAGATGTTAGATgtatat
atttcaattctaatCACGATACATATTGTCTGTTGAAGATATCCTTGATT
TGAAGTCACCCATCTGTTTTTGAAATGCCTTTTCATGAGTTTTCAAGGAG
CAGGATATATACAGAATTTATGGttgatgattttgatatttttttatatt
ataggtATATACTGATATATTTTACAcctaaataaattgaaaaaagttat
aTCGAAATCAAATGAGTGATATTAAACCGAATACTTTTCATCTGAGCAAA
CATAAAGCCAGGTAAACTAACTGAAAACCTTAATTTCCAACAAAACACAG
TCTGACAGTTCAcaaaaatagcacaaaaacATTGAGCCAGGCCAGTCTGA
AAAGAGCCAGGCCACAAAAAAGAATGGTATGGACTTAAAGTTTGGTCATA
TTACAATGCTAGAAAATTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGTCAGGGCTCTATTTCAT
TTTCGGTGCAACAAATTATTTCTCAAAGGGCAGATCTGggtttgatattt
tattttgagtgTTAAACGTGGAAGAGTGTGGTTCGAAGGCGTTTTGGGTG
CTaggcgtatcagtggaagggtgtggttctaagatgttttgggtgcgaag
cgtatcagtggaagggtgtggttctaaagttttgggtgcgaagcgtatca
gtggaagggtgtggttctaaggtgttttgggtgcgaagcgtatcagtgaa
gggtctaggttctaacgcgttttgggtgcgaagcgtatcagtggaagggg
gtggttctaagatgttttgggtgcgaagcgtatgagtggaagggtgtggt
tctaaagTTTTGGgcgcgaagcgtatcagtggaagggtgtggttctaaga
tggtttgggtgcgaagcgtatcagtgaagggtctaggtgctaacgcgttt
tgggtgcgaagcgtatcagtggaagggggtggttctaagatgttttgggt
gcgaagcgtatgagtggaagggtgtggttctaaagTTTTGGgcgcgaagc
gtatcagtggaagggtgtggttctaagatggtttgggtgcgaagcgtatc
agtgaagggtctaggtgctaacgcgttttgggtgcgaagcgtatcagtgg
aagggggtggttctaagatgttttgggtgcgaagcgtatgagtggaaggg
tgtggttctaaagTTTTGGgcgcgaagcgtatcagtggaagggtgtggtt
ctaagatggtttgggtgcgaagcgtatcagtgaagggtctaggtgctaac
gcgttttgggtgcgaagcgtatcagtggaagggggtggttctaagatgtt
ttgggtgcgaagcgtatgagtggaagggtgtggttctaaagTTTTGGgcg
cgaagcgtatcagtggaagggtgtggttctaagatggtttgggtgcgaag
cgtatcagtgaagggtctaggtgctaacgcgttttgggtgcgaagcgtat
cagtggaagggtgtggttctaaggtgttttgggtgcgaagcgtatcagtg
aagggtctaggttctaatgcgttttgggtgcgaagcgtatcagtgaaagg
gtgtggttctaagatgttttgggtgcgaagcgtatcagtgaagggtctag
gttctaacgcgttttgggtgcgaagcgtatcagtggaagggtgtggttct
aaggtgttttgggtgcgaagcgcatcagtgaagggtctaggttctaacgc
gttttgggtgcgaagcgtattaGTGAAACTGGGTGGAGAATTAGGCGGGG
TCTACTTTGGGTCAGTAAATTTACCTTTGGGCGCCAAGCGTATCAGTCAC
TCTCACTGATAGGCTTGGTGCCCATGGGCCCTGTAATGTCAACCTGATCC
GAAATTTTCATCCCTACTATGGGGCGAAAATACTGCGAGACAGGGAACAT
ATTTGAAATTAAAAGTATCTAGCTATTTTAACCACCATCCTGATGTGTAA
TGTTTTCTGTTCTGTTTAGAGCCGTCAACACATCGTCGAAAAGAGTTTCC
AAGCCAAAGCAGATTATCAAATCACCTCAACCGTAAgaatttataaaaaa
cacttttttgatttaaaatttaaaaatgcgtACTGTATGCGCTGTTGATT
GGTTTCAAGCAAATATATCCGTTTGTTATGATTATACTGGCGTTACACCT
TTCCGGAAAGTGGGTGGTACATTTTGCGGGCAATGACTTAACGTTTCTTC
TATTTAGGTTAAAGTTACACAGTCTGAAATCTTTTAGTTATCCTCAGTTT
AAATAATCAATATTATTTTTACAGGATTGTCAAATCAAAAGATACATCTG
AAGTAGTATTTAAATCACGGGACTGGCGCATGAACGATCCGTCACAGTAA
GTTTCAAGGGAACATTTTCAGATCGATGATAGGAATTAGAATATGGTGTC
CCAGGAATAATTCACAGTGTCAATAAGTAATGAATAACCTTAAAAACGGT
AAAACTACCATCTCAACAACTCCAACAAACAGGTCTACTTCTAATAAGGG
TGATTCTTGTTTTAGGAAAATTACTGCCGTAAGAGAAGTTTGTGGTGGAC
CTGAGCCAATCCAAAAACAACTATCATCACAAAATGCACTTCAACCAAAA
GGCAAATTGCTAATCCCGTAAGTAATATCAAACTTTCactgaaacaattt
tttttcttgagttTTGATATTTCTCTTGTTCCCTCTATTTGCTTGAATTT
TTATTGAATCGAATGTTTCACTGTTCGAGTTTAGATTAGATTTGAAAGTC
AGAAACGCCCTTGAAATTACATGTTTTCGAAGGACAGAGAGCTTCATACT
CCTTCAaggatattttttatttatataagCCTCACTGGGAACGAATCAGC
TGTTTTAATGTCAGGTATGATAACATACGTGGATGCAGTGTTGCTAACTA
CTTTTAACAATGTTTCGATTTCACTTTTTAGGAAGCCCGTACAAATGAAG
GGGTATCTTTTTGTTCCGGCGGAATATGTCCAATATATGCCGTAAGTTAA
ATATTGTATTGATTTTCTGTTTTACCtaaatttccattttttagcTACTA
ACCGGATTATAAAATTATTTGCTGTGTTCATATTTGTTGTTTTCATCAAA
GCCTAAAAAGTCTTTGGTGATTTATGATGGAACGATTATCTTTTAAGCAC
TAAGTTTTGCAGAATTTTAGCATTTTCCCAGCCTCCTAATCTGCCCAAAT
AATGATTGTTTTATATTTGTCTCTTGTAGTGGCTTTGGATCGCTCGAAAT
TCCAAAGGTTAAAGACTCTCAAGACTTTCGGCTGAACAGGTAATGTTCAT
GAAGTTTTTATAATTAGAGTTCACAGGGAAGTTGAAATGGTTCTTGGAAA
GTTTTTAGGGTGCAGCCCCTTTGGTTTAGATGATCAAAATAATTCTTCTA
TAAAGTCACTGTAAATATGAAGTTTATATATTTCAAATAGCTACTACGTA
CAAGAAAAAATTCCCGGGGTCATACTTTAAGCATATTGCGTCCAGCAGTC
TAACCCTTCATTtgtctaaaatgttcttagtttttttcttattctttttg
cCATCGAaccttatgctcttataaaaaaacgcgtagggcttaataaaatt
tctaaattataTGTCTATTGAAGTATGTAACTTGGTCAAATCATATATTG
GCCGAAATTTCTCTAATAATTTAGatccttttaacttttttcatcgtttt
ttaatttcagttcccaatcacaggaaaaaatcaatcGACAGATTATCAAG
CCAATAAAGAAAGGTTAATTCATCTTAGTATGCTTATCAGTATTTTGAAA
GGTTTAGTTATAGCCAGCTGGAATACCGTTCGTCTTTGCCAATTTTAAGG
AACAATGCATGCCAAGCGAAATATTTAGGAAAGTCATCccattaaccctt
taagtgccaatgtcgtatatatcagacagcGGCTATTTAGgggggcgaag
ccctcctgtaatgcctagtttgagttagaaatcgtcatttttggtctaac
tcgtaggtaTCGGATTGGACTTCATGcagccaagcaaaaaaaaaaatcaa
aagtgagtcttttcagtgAGATTTTAAGCTAGaatgtcaaaaaatgcaaa
aatttgacaaaaatccattttttaaagattttgaccgttttttgaccatt
tttatcaACGAGTGATcgaagaacctccaaatttggccctgattaacttg
attctgtcttccagcgaatcagtttgaagttttactactcggcacctttc
tatcattcagtcaggtccATGCAGCTAAAATCTAAGTCGGGCGGCGGCGC
CGAAAGCGCTTAAAAGAAAGAGGatagactctaagctatccaacagACTA
TAAACGAGTTTCTAATTCCTTCTTTATCCGGAggtataagcctttaaagt
ttgaactagcgattttgtttttaaaaacttgggaaaaaaatgacagtggc
acttaaagggttaaggaaGTCCACCAAATTGCATAATTTACATGTCTTTT
GACCGAAAATCAGAGGTTCAAATTTAGACCACTACAAATGTGTTATGTGA
ATTTTCATTAcggtaaaatttatgatttgcTTTTGGCAGCACTCTCAAAA
AACACATCTTCATGAGTAGAATTTTCTTCTCTTGAGTACTTTACTCTCTT
ATCTTGGTAAAGACATCTTCTTTtacaatgaaaataatttttcttcttta
ttcttTTCAGAAGCACCTGTCGATTCGTCCTACGAAAGTCAATTGGTTGA
TATCTTTGCATTGCCTACCCCGGTGATCAAAACTAGCTGCGTTAAAGTTG
ACAGTGTTGGCAGACTTTgagtaagttttattttttattctaacCAAATA
GCCACACTTTATGCACCAAGCAATGTAAAACTAACGAAGACCAAAACTGT
GCCCATAAGAGTGCGCTACTAAATTTGAATAAAGGCGAAAATGTTACcct
ttgaaaaggaaaaaaaaggaTAAATGTTGTACCCATAATTTTGCACTCTA
GGAGAAAactaaaatgatgaaaagtggGACCTTTGCAGATGATCTTTTGA
ATTTGTTGTTGGAGAAGGTAAAAAATCCGACCCTTATGTCTGCACTCACA
AGGAAAAGAAAACCACGCCAAAAGCCACCGAATCACCTGGTAGCTGTTTA
TCTTAATCTCCTTTGTCTAATTGTCATTTTTTCAGATATGACGATGATCA
GAAGATAGACTACAATGAAATCATCCAATTTTGAATTTCCTTtgccaaaa
aattttatattttgtattgtaaatagttctttttaaaTTCCTTGGGTATA
TAtttcaattatattttttttaaaccaaacaaaaattcttaaaaccC

Coding sequence (CDS) from alignment at sc0000087:648630..655826+

>TCONS_00008750 ID=TCONS_00008750|Name=TCONS_00008750|organism=Clytia hemisphaerica|type=CDS|length=4560bp|location=Sequence derived from alignment at sc0000087:648630..655826+ (Clytia hemisphaerica)
ATGAGTGATATTAAACCGAATACTTTTCATCTGAGCAAACATAAAGCCAG
AGCCGTCAACACATCGTCGAAAAGAGTTTCCAAGCCAAAGCAGATTATCA
AATCACCTCAACCGATTGTCAAATCAAAAGATACATCTGAAGTAGTATTT
AAATCACGGGACTGGCGCATGAACGATCCGTCACAGAAAATTACTGCCGT
AAGAGAAGTTTGTGGTGGACCTGAGCCAATCCAAAAACAACTATCATCAC
AAAATGCACTTCAACCAAAAGGCAAATTGCTAATCCCGAAGCCCGTACAA
ATGAAGGGGTATCTTTTTGTTCCGGCGGAATATGTCCAATATATGCCTGG
CTTTGGATCGCTCGAAATTCCAAAGGTTAAAGACTCTCAAGACTTTCGGC
TGAACAGttcccaatcacaggaaaaaatcaatcGACAGATTATCAAGCCA
ATAAAGAAAGAAGCACCTGTCGATTCGTCCTACGAAAGTCAATTGGTTGA
TATCTTTGCATTGCCTACCCCGGTGATCAAAACTAGCTGCGTTAAAGTTG
ACAGTGTTGGCAGACTTTgaATGAGTGATATTAAACCGAATACTTTTCAT
CTGAGCAAACATAAAGCCAGAGCCGTCAACACATCGTCGAAAAGAGTTTC
CAAGCCAAAGCAGATTATCAAATCACCTCAACCGATTGTCAAATCAAAAG
ATACATCTGAAGTAGTATTTAAATCACGGGACTGGCGCATGAACGATCCG
TCACAGAAAATTACTGCCGTAAGAGAAGTTTGTGGTGGACCTGAGCCAAT
CCAAAAACAACTATCATCACAAAATGCACTTCAACCAAAAGGCAAATTGC
TAATCCCGAAGCCCGTACAAATGAAGGGGTATCTTTTTGTTCCGGCGGAA
TATGTCCAATATATGCCTGGCTTTGGATCGCTCGAAATTCCAAAGGTTAA
AGACTCTCAAGACTTTCGGCTGAACAGttcccaatcacaggaaaaaatca
atcGACAGATTATCAAGCCAATAAAGAAAGAAGCACCTGTCGATTCGTCC
TACGAAAGTCAATTGGTTGATATCTTTGCATTGCCTACCCCGGTGATCAA
AACTAGCTGCGTTAAAGTTGACAGTGTTGGCAGACTTTgaATGAGTGATA
TTAAACCGAATACTTTTCATCTGAGCAAACATAAAGCCAGAGCCGTCAAC
ACATCGTCGAAAAGAGTTTCCAAGCCAAAGCAGATTATCAAATCACCTCA
ACCGATTGTCAAATCAAAAGATACATCTGAAGTAGTATTTAAATCACGGG
ACTGGCGCATGAACGATCCGTCACAGAAAATTACTGCCGTAAGAGAAGTT
TGTGGTGGACCTGAGCCAATCCAAAAACAACTATCATCACAAAATGCACT
TCAACCAAAAGGCAAATTGCTAATCCCGAAGCCCGTACAAATGAAGGGGT
ATCTTTTTGTTCCGGCGGAATATGTCCAATATATGCCTGGCTTTGGATCG
CTCGAAATTCCAAAGGTTAAAGACTCTCAAGACTTTCGGCTGAACAGttc
ccaatcacaggaaaaaatcaatcGACAGATTATCAAGCCAATAAAGAAAG
AAGCACCTGTCGATTCGTCCTACGAAAGTCAATTGGTTGATATCTTTGCA
TTGCCTACCCCGGTGATCAAAACTAGCTGCGTTAAAGTTGACAGTGTTGG
CAGACTTTgaATGAGTGATATTAAACCGAATACTTTTCATCTGAGCAAAC
ATAAAGCCAGAGCCGTCAACACATCGTCGAAAAGAGTTTCCAAGCCAAAG
CAGATTATCAAATCACCTCAACCGATTGTCAAATCAAAAGATACATCTGA
AGTAGTATTTAAATCACGGGACTGGCGCATGAACGATCCGTCACAGAAAA
TTACTGCCGTAAGAGAAGTTTGTGGTGGACCTGAGCCAATCCAAAAACAA
CTATCATCACAAAATGCACTTCAACCAAAAGGCAAATTGCTAATCCCGAA
GCCCGTACAAATGAAGGGGTATCTTTTTGTTCCGGCGGAATATGTCCAAT
ATATGCCTGGCTTTGGATCGCTCGAAATTCCAAAGGTTAAAGACTCTCAA
GACTTTCGGCTGAACAGttcccaatcacaggaaaaaatcaatcGACAGAT
TATCAAGCCAATAAAGAAAGAAGCACCTGTCGATTCGTCCTACGAAAGTC
AATTGGTTGATATCTTTGCATTGCCTACCCCGGTGATCAAAACTAGCTGC
GTTAAAGTTGACAGTGTTGGCAGACTTTgaATGAGTGATATTAAACCGAA
TACTTTTCATCTGAGCAAACATAAAGCCAGAGCCGTCAACACATCGTCGA
AAAGAGTTTCCAAGCCAAAGCAGATTATCAAATCACCTCAACCGATTGTC
AAATCAAAAGATACATCTGAAGTAGTATTTAAATCACGGGACTGGCGCAT
GAACGATCCGTCACAGAAAATTACTGCCGTAAGAGAAGTTTGTGGTGGAC
CTGAGCCAATCCAAAAACAACTATCATCACAAAATGCACTTCAACCAAAA
GGCAAATTGCTAATCCCGAAGCCCGTACAAATGAAGGGGTATCTTTTTGT
TCCGGCGGAATATGTCCAATATATGCCTGGCTTTGGATCGCTCGAAATTC
CAAAGGTTAAAGACTCTCAAGACTTTCGGCTGAACAGttcccaatcacag
gaaaaaatcaatcGACAGATTATCAAGCCAATAAAGAAAGAAGCACCTGT
CGATTCGTCCTACGAAAGTCAATTGGTTGATATCTTTGCATTGCCTACCC
CGGTGATCAAAACTAGCTGCGTTAAAGTTGACAGTGTTGGCAGACTTTga
ATGAGTGATATTAAACCGAATACTTTTCATCTGAGCAAACATAAAGCCAG
AGCCGTCAACACATCGTCGAAAAGAGTTTCCAAGCCAAAGCAGATTATCA
AATCACCTCAACCGATTGTCAAATCAAAAGATACATCTGAAGTAGTATTT
AAATCACGGGACTGGCGCATGAACGATCCGTCACAGAAAATTACTGCCGT
AAGAGAAGTTTGTGGTGGACCTGAGCCAATCCAAAAACAACTATCATCAC
AAAATGCACTTCAACCAAAAGGCAAATTGCTAATCCCGAAGCCCGTACAA
ATGAAGGGGTATCTTTTTGTTCCGGCGGAATATGTCCAATATATGCCTGG
CTTTGGATCGCTCGAAATTCCAAAGGTTAAAGACTCTCAAGACTTTCGGC
TGAACAGttcccaatcacaggaaaaaatcaatcGACAGATTATCAAGCCA
ATAAAGAAAGAAGCACCTGTCGATTCGTCCTACGAAAGTCAATTGGTTGA
TATCTTTGCATTGCCTACCCCGGTGATCAAAACTAGCTGCGTTAAAGTTG
ACAGTGTTGGCAGACTTTgaATGAGTGATATTAAACCGAATACTTTTCAT
CTGAGCAAACATAAAGCCAGAGCCGTCAACACATCGTCGAAAAGAGTTTC
CAAGCCAAAGCAGATTATCAAATCACCTCAACCGATTGTCAAATCAAAAG
ATACATCTGAAGTAGTATTTAAATCACGGGACTGGCGCATGAACGATCCG
TCACAGAAAATTACTGCCGTAAGAGAAGTTTGTGGTGGACCTGAGCCAAT
CCAAAAACAACTATCATCACAAAATGCACTTCAACCAAAAGGCAAATTGC
TAATCCCGAAGCCCGTACAAATGAAGGGGTATCTTTTTGTTCCGGCGGAA
TATGTCCAATATATGCCTGGCTTTGGATCGCTCGAAATTCCAAAGGTTAA
AGACTCTCAAGACTTTCGGCTGAACAGttcccaatcacaggaaaaaatca
atcGACAGATTATCAAGCCAATAAAGAAAGAAGCACCTGTCGATTCGTCC
TACGAAAGTCAATTGGTTGATATCTTTGCATTGCCTACCCCGGTGATCAA
AACTAGCTGCGTTAAAGTTGACAGTGTTGGCAGACTTTgaATGAGTGATA
TTAAACCGAATACTTTTCATCTGAGCAAACATAAAGCCAGAGCCGTCAAC
ACATCGTCGAAAAGAGTTTCCAAGCCAAAGCAGATTATCAAATCACCTCA
ACCGATTGTCAAATCAAAAGATACATCTGAAGTAGTATTTAAATCACGGG
ACTGGCGCATGAACGATCCGTCACAGAAAATTACTGCCGTAAGAGAAGTT
TGTGGTGGACCTGAGCCAATCCAAAAACAACTATCATCACAAAATGCACT
TCAACCAAAAGGCAAATTGCTAATCCCGAAGCCCGTACAAATGAAGGGGT
ATCTTTTTGTTCCGGCGGAATATGTCCAATATATGCCTGGCTTTGGATCG
CTCGAAATTCCAAAGGTTAAAGACTCTCAAGACTTTCGGCTGAACAGttc
ccaatcacaggaaaaaatcaatcGACAGATTATCAAGCCAATAAAGAAAG
AAGCACCTGTCGATTCGTCCTACGAAAGTCAATTGGTTGATATCTTTGCA
TTGCCTACCCCGGTGATCAAAACTAGCTGCGTTAAAGTTGACAGTGTTGG
CAGACTTTga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004906XLOC_004906Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008750-exon-sc0000087-1491911889:648630..649940TCONS_00008750-exon-sc0000087-1491911889:648630..649940Clytia hemisphaericaexon
TCONS_00008750-exon-sc0000087-1510915933:648630..649940TCONS_00008750-exon-sc0000087-1510915933:648630..649940Clytia hemisphaericaexon
TCONS_00008750-exon-sc0000087-1575043694:648630..649940TCONS_00008750-exon-sc0000087-1575043694:648630..649940Clytia hemisphaericaexon
TCONS_00008750-exon-sc0000087-1491911889:652449..652511TCONS_00008750-exon-sc0000087-1491911889:652449..652511Clytia hemisphaericaexon
TCONS_00008750-exon-sc0000087-1510915933:652449..652511TCONS_00008750-exon-sc0000087-1510915933:652449..652511Clytia hemisphaericaexon
TCONS_00008750-exon-sc0000087-1575043694:652449..652511TCONS_00008750-exon-sc0000087-1575043694:652449..652511Clytia hemisphaericaexon
TCONS_00008750-exon-sc0000087-1491911889:652754..652825TCONS_00008750-exon-sc0000087-1491911889:652754..652825Clytia hemisphaericaexon
TCONS_00008750-exon-sc0000087-1510915933:652754..652825TCONS_00008750-exon-sc0000087-1510915933:652754..652825Clytia hemisphaericaexon
TCONS_00008750-exon-sc0000087-1575043694:652754..652825TCONS_00008750-exon-sc0000087-1575043694:652754..652825Clytia hemisphaericaexon
TCONS_00008750-exon-sc0000087-1491911889:652995..653096TCONS_00008750-exon-sc0000087-1491911889:652995..653096Clytia hemisphaericaexon
TCONS_00008750-exon-sc0000087-1510915933:652995..653096TCONS_00008750-exon-sc0000087-1510915933:652995..653096Clytia hemisphaericaexon
TCONS_00008750-exon-sc0000087-1575043694:652995..653096TCONS_00008750-exon-sc0000087-1575043694:652995..653096Clytia hemisphaericaexon
TCONS_00008750-exon-sc0000087-1491911889:653411..653470TCONS_00008750-exon-sc0000087-1491911889:653411..653470Clytia hemisphaericaexon
TCONS_00008750-exon-sc0000087-1510915933:653411..653470TCONS_00008750-exon-sc0000087-1510915933:653411..653470Clytia hemisphaericaexon
TCONS_00008750-exon-sc0000087-1575043694:653411..653470TCONS_00008750-exon-sc0000087-1575043694:653411..653470Clytia hemisphaericaexon
TCONS_00008750-exon-sc0000087-1491911889:653709..653768TCONS_00008750-exon-sc0000087-1491911889:653709..653768Clytia hemisphaericaexon
TCONS_00008750-exon-sc0000087-1510915933:653709..653768TCONS_00008750-exon-sc0000087-1510915933:653709..653768Clytia hemisphaericaexon
TCONS_00008750-exon-sc0000087-1575043694:653709..653768TCONS_00008750-exon-sc0000087-1575043694:653709..653768Clytia hemisphaericaexon
TCONS_00008750-exon-sc0000087-1491911889:654190..654242TCONS_00008750-exon-sc0000087-1491911889:654190..654242Clytia hemisphaericaexon
TCONS_00008750-exon-sc0000087-1510915933:654190..654242TCONS_00008750-exon-sc0000087-1510915933:654190..654242Clytia hemisphaericaexon
TCONS_00008750-exon-sc0000087-1575043694:654190..654242TCONS_00008750-exon-sc0000087-1575043694:654190..654242Clytia hemisphaericaexon
TCONS_00008750-exon-sc0000087-1491911889:655190..655299TCONS_00008750-exon-sc0000087-1491911889:655190..655299Clytia hemisphaericaexon
TCONS_00008750-exon-sc0000087-1510915933:655190..655299TCONS_00008750-exon-sc0000087-1510915933:655190..655299Clytia hemisphaericaexon
TCONS_00008750-exon-sc0000087-1575043694:655190..655299TCONS_00008750-exon-sc0000087-1575043694:655190..655299Clytia hemisphaericaexon
TCONS_00008750-exon-sc0000087-1491911889:655665..655826TCONS_00008750-exon-sc0000087-1491911889:655665..655826Clytia hemisphaericaexon
TCONS_00008750-exon-sc0000087-1510915933:655665..655826TCONS_00008750-exon-sc0000087-1510915933:655665..655826Clytia hemisphaericaexon
TCONS_00008750-exon-sc0000087-1575043694:655665..655826TCONS_00008750-exon-sc0000087-1575043694:655665..655826Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008750-proteinTCONS_00008750-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000087supercontigsc0000087:648630..655826 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.331287	0.290863	0.187463	0.192218	4.60352	3.08511	4.44717	5.0927	1.795	3.89868	2.8833	2.33409	1.17694	1.04084	0.620598	0.64809	0.369865	0.483979	0.570381	0.967048	0.706755	1.02195	0.582991	0.488365	1.8507	1.81959	2.04772	1.94217	0.894321	0.99183
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008750 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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