TCONS_00008784 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008784
Unique NameTCONS_00008784
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1850

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008784 ID=TCONS_00008784|Name=TCONS_00008784|organism=Clytia hemisphaerica|type=transcript|length=1850bp
GTCATGTGATGCGATTGTTTACATATTCTTctcgccgtatatttggaaat
tttggaaacgCTTTTGTTGTGCTAAATGTAGAAAAAGTGTTGAGTCAGCA
GACGGAGCAAACTTGCGTTTCATACGACAAGAACCTAAAAGTACTGTgta
aaccattgagtttaaagccccgaatgAGGTGGTTGCAACTGATGATGTTG
GTGAAGATGATGAAGACAAAGAAGACGAAAATGTCGACGGTGAAGATGAA
ACAAATGTCGAAGAAGCTTTGAAAGAATGGTTGTATAAAGATGATGAGAC
TTTGAAGACAAGAACATTAAATTCACACCATCAAACGCTTCAAGAAGGCC
GTCAGAAGCCTCCTCTTTCACCCAAACCTAAAAATTACCGTCAAATTGTC
GAAGCAAAGAGAAGTCAATTCAGAAAACAACACGATGCATTGTCACGATC
ACAGAGTCGTGTCGAGGCTCTATCACGGTCGTGTAGTCGCGCGGAAGCAC
TGTCACGTTCACACAGTCGTGTCACGGACGCATCGCTTTCGTTCGATAGT
TTACCAGCCTCTAGACCGGACAGTCGAAATGATATGCATCGATCTGAAAG
TCGACCGAAATCTCTTGCCGCGGCCGCGCGTATTTTACAAGCAGAGGCAG
AGAAATGGGAAGAGGAGAATAATTCCATCATCAAAGTGGCCAAGTTGATG
GCCGATCAAATGACGCAAATGGCTGACTTTCATAAAGGACGTAATAGTCG
CCTGAAGACGAAGAGTGATTTTGTTGCCACAGCCAAAGCGATTGCAGCCA
ATGCCAAAACCATCTCCAAGTTTGCTGCTGTTGTAGCGCAGAAATGTCCC
GATAAAAGTTGTCAGATCGATTTATTACATTACGCAGAGCTGATACCAAC
GATGAGCACGCAATTACGTATAGTGGCTTCCGTCAAATCCATTAACGTCA
ATGACGAAACGACGGATGCGATGTTGGTTATCAATGCAGGAAACTTGATG
AAAGGAGTTGCTGGTGCTCTCAAAGCTGCTGAATCCGCTTCTGTAAAGAT
CTCAACGAAGCAAGCATACGATGGCGGTAACTATGGAGATAGTGATACAG
AAGATGTGCAACAACAAAGTTGTGATTTAGCTTTCCAATGGAAACGTAAA
GTTCGTCTCAAACGAGCGGTTGATGCTATATGTTCACCACGCGATGAATT
GGGCTTACGTCTCTCCAAAGAAACTTCGCTACCCTCGCTGACAGATTTGG
TTTCTTATAGTTCGAACACTGAACTGTGAGAGTTTATGTTCTTCATATTG
GTGACGCCCAAGGAGACTTAAAATAGTTTTGTTGATTACAACTTGCTCCT
AGTACCTGAATGCTTACTTACTCTCAGATGGCTAAGCTCGTTGGGCCTAA
AGTTTTATCCTGCTTATCCCATTTGTTTTGAGATTTTGGGCAATAATGAA
GTCTCCACCAGCGGCTTTCAATGTTTTTAGAGAATTCCATGGAGATGGAA
TTCCCCTCNCCACCAGCGGCTTTCAATGTTTTTAGAGAATTCCATGGAGA
TGGAATTCCCCTCCCCAATATTGATAACGGTGGGTTAGATAATTGAGAGT
AAAATTACCTATTTAACTAACCTTGGTTAGAATATTGAATATTAGAATTT
AATGTGAATGTTAGGAAAGTAGCCACTTGTACGCATTGTTTTATAGTGTT
TATAATGTTGCCTAAAATTGTAAATACAAACGCAATTTTTTTAACCGAGA
ctatgttaatgttaatgtaaatttttcatatttggaatttcaaatttttg
atcatttttcttACATACATTTTTCTAATTTCGAAATATGATGATTCTTA
Run BLAST on NCBI

transcript from alignment at sc0000087:410723..418587-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008784 ID=TCONS_00008784|Name=TCONS_00008784|organism=Clytia hemisphaerica|type=transcript|length=7865bp|location=Sequence derived from alignment at sc0000087:410723..418587- (Clytia hemisphaerica)
GTCATGTGATGCGATTGTTTACATATTCTTCTCGCCGTATATTTGGAAAT
TTTGGAAACGCTTTTGTTGTGCTAAATGTAGAAAAAGTGTTGAGTCAGCA
GACGGAGCAAACTTGCGTTTCATACGACAAGAACCTAAAAGTACTGTGTA
AACCATTGAGTTTAAAGCCCCGAATGAGGTAGAGATGAATCTTAAATATT
TATCAAGCAAGAAAAAAGTGAAACCTTAAGATTAGCGCCGTTTTGAGAAT
AACGGATTGAATCTAGCCCTTTCTTTGTTTTTAAGTGGCATATTTTTCGA
AATCTGACAATAGATTTTACTTTCAATCTGGGGTATGCGGAGATAAGTGG
CTTCATTCCCAACCCAGGAGTTTGGGGGTACTTCGGGGCTTTAACGTTTT
ATAGAACTGAGTTTGTTGTTTTGATGTTTTGTCAGCTGGATACGCAAAAA
AAATGACTAGAGCATTGTTTTGTATTTTTCTGAGATGATGTATAATATAT
CTTAACCCAATCATCTATTGATTATAAATTTTGGGATTTATTTCAGGCAG
CTACATTCTAAAGGCTTTAACTTTCGATGCAAGAGTTTGATGGGATAAAC
TTAATAATTTTACATTTGAAATCAGGATGTTTTAAAGTCTCAAACTTTCT
ACGAAAAATGGTTCGTTAAACAATGACAAATTTGTCGCAATAACGGGAAT
TGTACCTTTTCATTATTCACCAGACTTTCCCAAGTCTACGCAAGTAAATC
TTTTCAGGGAATTCTTATATAGATCCAGATGCGAAATACTACTTTAAAGA
TTTAGTGACAAATTATACTTTAGTTTTTTGGTCCTACCTGGAGGTCCTAT
ATATATAAATTAACCGTTGTCTGTCCGTCCGTCCTTGCGTCTGTTACCAG
TTTTTCTCGAGATTGGCTCATTACTTTTGCTTATGTTTGGCACAAAGATG
CAAAATGGCAATGCTCGAAATGTGACGGAGTCCGATTTTCGGAAAATGCC
GGAAAACCCGGTTTTTTGCCATTTTCTCGAGATTTCATCATTAGTTTTTG
CTGATTTTTTGCACAAAGACGCGTATTAGGAATGCCCAAAACATGACCAA
GTCTGATTTTTTAAAAAAATGCCGAAAATTGCAGTTTTTGAAGATTTTCA
TTAGACTTTTTCTTATATTTTGTTGCATTATATTAATTGCAATACCCACC
ATCAAGCATGTTTCAATTGTCAATATAACTTATTTTTGTAGCTGGAACTT
TCTAAAAATCGCCGGAACAGCCGATTTTCGCCGGAAAAACGGTATTCCTT
GAATTTCTCGAGCTGTACTTTATATTTTTTTATGAAATTTTGCACACTGA
TGTAAAATGACAATTACCTAAAATGTGACGGNCGAGCTGTACTTTATATT
TTTTTATGAAATTTTGCACACTGATGTAAAATGACAATACCTAAAAAGTA
ATGGAGCCCGATTTTCGAAAAACATTTTTTCCGGCCGAAAATGCCGGAAA
TATGCCGGAAATCGCCGTTTTTCTGGATTTTCATTGGACTTTTTCCTTAC
AATTGGTTGTTTTTTCATTCAAAATCATCATTAATAGCAATGCCCACCAT
CAAGCATGATTCAATTGTCAATAAAAATGGTTTTTGCGACCAGAACTTTC
TATTTGTTTTTTCCCTACAACCCTTCCCTCTCCCCCCATCAACAATCAAT
GATGAATTTATTGCGTTATGCATTTTCGCTAAACGCTATATTTACTGACT
GATTTTTTTCTCCTGGCATTGTTATCTAACTTTCATAATCAGGTACCGGG
TGCGCCGCAAAAAAGTTTCTCTCTTTAAAGTGAATTTTCTCGAAGTNTAT
CTAACTTTCATCATCAGGTAGGTTCATTCAGCATCTAGCTTGTTGTTCAT
ATTATCGTAGTTTGTAGCAGAGCGCTGAGTGTGTAGGATATTTTCGACTT
TATTGCAAAACACAATATGAAAAACAAAAAAGAATTAAGAACAGAAGACT
AAAGTGTAAAGTTTCCTCTCTATAATAAGTGACAAGCCTTTGAGAGGGTT
GATTTACCCAGGGGTCTTATGTAACACATTTCTATTAGGCAAAGTTTCGT
GGATCAGGCAATCACGTGATCAATAAAATCTATGAATGAAGACTCTCGCA
AAGAGAAGTATCTTGGCTTTGTTCACCTTTTTATACTCTTCTCGAAACAT
TTTTCTGTTCAGACGAAAAAACCGATTTCCCGATTCCCAAGGTTTAAATA
TGAGTCTAGCCTCTATAATTGAATGCCCTCTTTCAACTCAAACAAGTTTT
CTGGTCCCTTCAGTCAACAATACCTTATAAACCTTACTCCATAACTCAAA
AACTTGTGTTCCCGTGCGTATTCGAGTTATAGAGAAGCTACTGTATATAG
AAATGAGATGCGCCTCTATGCTGACAAAGCAGAATAAGCAAAACTTGTAC
TCGCGCGGCGCCGAAAGGGGAGAAAATCGTTCTTTCTTTTGTTTAAAATA
CTGGTGTGTAAGCAAATACAGGGAGATGAGTCAAACGATGGCCTTTAAAG
GAAAAGTCAAACGTACTACAGTGGACACTCACTAATTCGAACTTGTATTA
ATTCTATGATTCGAAATAATTCGATTTAATTCAACTTCAAATTAGCAAGA
TTTAACGGCATTATTGGATTCATCTTTCACCAGGTGGTTGCAACTGATGA
TGTTGGTGAAGATGATGAAGACAAAGAAGACGAAAATGTCGACGGTGAAG
ATGAAACAAATGTCGAAGAAGCTTTGAAAGAATGGTTGTATAAAGATGAT
GAGGTAACTGCTCCTTTTATCCAGTGTTCATGATCATAATTAGGGTGACT
ATATTCGAAAACCTTGCATTGACCAGCATAACTCCTTCGTAAATTTATCA
TGGGTCTTCTGATGTTATATGAAGGAAAAACGACATCTTTAGGAAATGTA
GACGACGGTTCGGTACCGGTAATTTGTCCAATCAAAACAAACAACTAGTT
TGGCCCAAGCGCAGAGGCGAAAGAATGGTCGTGATCGATTAAATTTTCGG
CACCAAGCTTGTTACTTATCGAAGATGGCAAGTAGTAGCTCTATCTAAGC
GTTTTATTTAAGATATCTGTTATTATTGTTGGAACAATAAAGTTTATGTT
CGATGTATAAGCAAATTTAACTTATTTCAGACTTTGAAGACAAGAACATT
AAATTCACACCATCAAACGCTTCAAGAAGGCCGTCAGAAGCCTCCTCTTT
CACCCAAACCTAAAAATTACCGTCAAATTGTCGAAGCAAAGAGAAGTCAA
TTCAGAAAACAACACGATGCATTGTCACGATCACAGAGTCGTGTCGAGGC
TCTATCACGGTCGTGTAGTCGCGCGGAAGCACTGTCACGTTCACACAGTC
GTGTCACGGACGCATCGCTTTCGTTCGATAGTTTACCAGCCTCTAGACCG
GACAGTCGAAATGATATGCATCGATCTGAAAGTCGACCGAAATCTCTTGC
CGTAAGTTACACCTTCACACCCTCAGATTACATATTATTGTTTAGATAAA
GTATAAGCTACAAAAAATAGCAGTCATTGCATTATNGTCAGATTACATTT
TATTGTTTAGATAAAGTATAAGCTACAAAAAATAGCAGTCATTACATTAT
AAACAGTGGAGTCTTTAACTCGAACCTCTACAACTCGAAACGTCTCCTTA
ACTCGAACAGATTTTCTTGTCCCTTCACTTAATAATACTTTAACCTTACT
CCACAAATCGAAATCTCCTAAATTTTTGTTCCTCATGCGTGTTCGAGTTA
TAGAGACTCATCTGTATCATAAAAAAACAATACCTAAATAAAAAGTTTAT
TTGTAAACTTATATATTAAGATATTTCTAAGATTTTTAAAAGAGATCGCG
CGAAAATGATATTCGCCCTCACTGTCAAGATAGTAAATTCAATAAAATTA
TCGATTCCCTTTTTATAGGCGGCCGCGCGTATTTTACAAGCAGAGGCAGA
GAAATGGGAAGAGGAGAATAATTCCATCATCAAAGTGGCCAAGTTGATGG
CCGATCAAATGACGCAAATGGCTGACTTTCATAAAGGACGTAATAGTCGC
CTGAAGGTTAGTTAGTTTTTTTTGCCATCTCTAATTTTACAAAAACTATT
AGATATTTAAATGATCCGAAATTGATTTTTTTTATTCCAAACTCGAGGTT
GGTTCAGTTTGAAATACATTTAAGTACATTTCAGCTCCCTTTAAGGTTGA
GGATACTTCAATTGGGAGTCGCGAGTGGGCCCGAATTTCACGCAATTTTT
ACAAAAATGGGAAAATTCACACATTACATTAGCAAATAGATTTTTCCTTT
CACGCATTTTTGTTTTACATTTTCATTGGTTTACGCAACGAGAAAACAAT
GTTGATTTATTCATTCGAACCACGGGATCAACAAGAGAACTTTTCATCCG
GGATTCCCTTTAAATAATACTCCTTAACTAGTCTGGGGGGANCCACGGGA
TCAACAAGAGAACTTTTCATCCGGGATTCCCTTTAAATAAAACTCCTTAA
CTAGTCTGGGGGGATGGTACTTAGGCAAAATGGGTGCCGGTATGTGCGAG
CCATAAGGGTCCTTTTTTCCCACCCTCGAAAGTCTCTCAAATGAGTACAA
AACCATTAACAAGCAATTCTCTGTAAGGGTCCAAAATTCACGAAAATCGA
ACTTTCCTCTCTCAAAGGGGTCGTGATTTCCAATAATTTGAACAAAAAAT
GAGTGAAAATCGATAAAAACTTTGAGAAAAGTCTGTATAGGGGTCCCAAA
AACGTTAATTTTTTCTCTCCCCTTTCGGGGAAAGTCTCTCTAAGGGTCAC
AAAATGCCAATCTTTCTCTCTGCAAGGGTCGGTTTTTGATTTTTGCCTCA
GACCTCGACCCGTTATCTCGCCAACCTAGTACCCCCCCCCCGGAACTAGT
CGAGGTAGAAATAATGATACAAATTCAATCAACTATAACTATCTTACAGA
CGAAGAGTGATTTTGTTGCCACAGCCAAAGCGATTGCAGCCAATGCCAAA
ACCATCTCCAAGTTTGCTGCTGTTGTAGCGCAGAAATGTCCCGATAAAAG
GTAATGTCACATTTACTTTTTTTGTTCAACTCTATATGTTTACTAGTGCG
TACTTCTTTATATAAATCCATTTTAGTTTGTGTTGATCTTTTCGATTTGT
GTGGTATTTTATTTCCGTTTTTTAAGAGGCACTGCATTGTCATTAAAAGT
ACAGTACAGATAATCAATTATCAATCGATATCTCTCTTGGACAGGAGAGG
TACTCAAAAACGATTTACCGTACGTGCGGCCCTTGAGCTTCCAAAAGTGC
ACTGGTAGGATCGAAAATGAGCAAAGATGGGAACAAGCGCACTATAAGAC
TGTAAAATCTTAGAACATCTGACCATATTTTGCCTTAAGGGCTGCTTAGA
CTACACAATATATTGACGAACAATATTTGACAATATCGTTTCGGACCGTA
ATGTACGGTGTAAATAACATTTGCTCTATTATGAAAAGGATTTTCTTTCT
GTAAACAATCCCCCTATATTGTTGGGAAATTGCAAATCAAGCTGACAATA
TATTGCGGACACCTTTTCAATATGTTGCCGGCACTCATATATCATCAATA
TATTGCCTGACAATATATTGTGTAGTGTATGTAGCCCTTTATAAAATATA
AGGGTCGATTGTTCGCCCAAATTTACTCAAATTTGGCTAAATTTTCCCTG
CACTGTAAGGGTCCGATTTCAAAGGCCTAGATTTGGGCCGCACGTACGGT
CGTTTAAGGATCCCAAAATTTGATGATTTATGGTTATAAAGTCAAGGAGT
AAGGAGTAACTGAAATTCAATCAGACTTCGCTAATCTTAGATAAATATCT
CTAGTGTAATTTTATGTCATTTTCTAGTTGTCAGATCGATTTATTACATT
ACGCAGAGCTGATACCAACGATGAGCACGCAATTACGTATAGTGGCTTCC
GTCAAATCCATTAACGTCAATGACGAAACGGTATGGAGTGTGAACTGTGC
TTTATATTCCCGGGGAGGGGGTACTGTATCTAGGCAAGTGAAGGGGAGGG
GGTATCTAGGCAAGTGAAGGGGAGGGCGACTTTTTTGGAATTGGAAGTCC
ATGTAAGGGTTGAAAATATCATAAAATAAATCTCAGTTCTACTAAGGGTC
GGACAAATAAGAAAGTTAAAAACTTTTTGCCCCTTGAAAGATCGAAATTT
GGTCAACAAATTCGAACAGAAAAGGGTCGTAAAATTTACAAAATGTTTCT
ATTTTTTTGTTTTTTCCTTCCCGTTAAACATCCGAGGGTCGAAGGTAAGG
CGACACATATCCGTCAGCTCGTAACCCTAACTTGTTGAGAATAACATCTA
TCGTATGCTATGTCTTGGAATCGGATTTTTCTATTTGAGCTCGATTTATC
GAATGTTGTCCGTCTTGTCCACTGCCCTTTATAAACCTATGACGCTGGCA
TCCACTAACGGATCCGTGCTACTTATAGTACACGTTAAGTATGGTTAAAA
TGTTGACATAATAAAAAGGCCAGCAAACTAATTTTTCACATGAAAATCTC
TTCTAGCCTTTCGGGACTTTAAATTCAATGAAGCTATAATGTTCAGTTCG
GATGCATCCAATTTCATAATTGATTCTTCGATTTTCTTTACAGACGGATG
CGATGTTGGTTATCAATGCAGGAAACTTGATGAAAGGAGTTGCTGGTGCT
CTCAAAGCTGCTGAATCCGCTTCTGTAAAGGTAGGTTTCATTAATGAACG
CTTTTAGTATATTTTGGTCGAACCTTGCTTATTGATACCTTTTTTTAAAT
TTCAAGGTTTGCGAGATCAATTTGATTAGTTGTTTTACGGGCCTGACGGA
CCCTGAAATTATAAAAATCGAAATGAAATTGGTTTTGGTAGTACATTTTT
ATTTTCATTGCTTTACGGACTGTTAAATTTTCAAAACTTTGTTAGTTTTT
CCAAGGCTTTGAGAATTTTATGTTCAATTTTCTAATGATGGTTAATTTCC
CTATTTGTTTCAGATCTCAACGAAGCAAGCATACGATGGCGGTAACTATG
GAGATAGTGATACAGAAGATGTGCAACAACAAAGTTGTGATTTAGCTTTC
CAATGGAAACGTAAAGTTCGTCTCAAACGAGCGGTTGATGCTATATGTTC
ACCACGCGATGAATTGGGCTTACGTCTCTCCAAAGAAACTTCGCTACCCT
CGCTGACAGATTTGGTTTCTTATAGTTCGAACACTGAACTGTGAGAGTTT
ATGTTCTTCATATTGGTGACGCCCAAGGAGACTTAAAATAGTTTTGTTGA
TTACAACTTGCTCCTAGTACCTGAATGCTTACTTACTCTCAGATGGCTAA
GCTCGTTGGGCCTAAAGTTTTATCCTGCTTATCCCATTTGTTTTGAGATT
TTGGGCAATAATGAAGTCTCCACCAGCGGCTTTCAATGTTTTTAGAGAAT
TCCATGGAGATGGAATTCCCCTCNCCACCAGCGGCTTTCAATGTTTTTAG
AGAATTCCATGGAGATGGAATTCCCCTCCCCAATATTGATAACGGTGGGT
TAGATAATTGAGAGTAAAATTACCTATTTAACTAACCTTGGTTAGAATAT
TGAATATTAGAATTTAATGTGAATGTTAGGAAAGTAGCCACTTGTACGCA
TTGTTTTATAGTGTTTATAATGTTGCCTAAAATTGTAAATACAAACGCAA
TTTTTTTAACCGAGACTATGTTAATGTTAATGTAAATTTTTCATATTTGG
AATTTCAAATTTTTGATCATTTTTCTTACATACATTTTTCTAATTTCGAA
ATATGATGATTCTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004923XLOC_004923Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008784-exon-sc0000087-1575043694:418410..418587TCONS_00008784-exon-sc0000087-1575043694:418410..418587Clytia hemisphaericaexon
TCONS_00008784-exon-sc0000087-1575043694:415785..415904TCONS_00008784-exon-sc0000087-1575043694:415785..415904Clytia hemisphaericaexon
TCONS_00008784-exon-sc0000087-1575043694:415087..415407TCONS_00008784-exon-sc0000087-1575043694:415087..415407Clytia hemisphaericaexon
TCONS_00008784-exon-sc0000087-1575043694:414482..414619TCONS_00008784-exon-sc0000087-1575043694:414482..414619Clytia hemisphaericaexon
TCONS_00008784-exon-sc0000087-1575043694:413488..413588TCONS_00008784-exon-sc0000087-1575043694:413488..413588Clytia hemisphaericaexon
TCONS_00008784-exon-sc0000087-1575043694:412558..412660TCONS_00008784-exon-sc0000087-1575043694:412558..412660Clytia hemisphaericaexon
TCONS_00008784-exon-sc0000087-1575043694:411808..411894TCONS_00008784-exon-sc0000087-1575043694:411808..411894Clytia hemisphaericaexon
TCONS_00008784-exon-sc0000087-1575043694:410723..411524TCONS_00008784-exon-sc0000087-1575043694:410723..411524Clytia hemisphaericaexon
TCONS_00008784-exon-sc0000087-1510915933:418410..418587TCONS_00008784-exon-sc0000087-1510915933:418410..418587Clytia hemisphaericaexon
TCONS_00008784-exon-sc0000087-1510915933:415785..415904TCONS_00008784-exon-sc0000087-1510915933:415785..415904Clytia hemisphaericaexon
TCONS_00008784-exon-sc0000087-1510915933:415087..415407TCONS_00008784-exon-sc0000087-1510915933:415087..415407Clytia hemisphaericaexon
TCONS_00008784-exon-sc0000087-1510915933:414482..414619TCONS_00008784-exon-sc0000087-1510915933:414482..414619Clytia hemisphaericaexon
TCONS_00008784-exon-sc0000087-1510915933:413488..413588TCONS_00008784-exon-sc0000087-1510915933:413488..413588Clytia hemisphaericaexon
TCONS_00008784-exon-sc0000087-1510915933:412558..412660TCONS_00008784-exon-sc0000087-1510915933:412558..412660Clytia hemisphaericaexon
TCONS_00008784-exon-sc0000087-1510915933:411808..411894TCONS_00008784-exon-sc0000087-1510915933:411808..411894Clytia hemisphaericaexon
TCONS_00008784-exon-sc0000087-1510915933:410723..411524TCONS_00008784-exon-sc0000087-1510915933:410723..411524Clytia hemisphaericaexon
TCONS_00008784-exon-sc0000087-1491911889:418410..418587TCONS_00008784-exon-sc0000087-1491911889:418410..418587Clytia hemisphaericaexon
TCONS_00008784-exon-sc0000087-1491911889:415785..415904TCONS_00008784-exon-sc0000087-1491911889:415785..415904Clytia hemisphaericaexon
TCONS_00008784-exon-sc0000087-1491911889:415087..415407TCONS_00008784-exon-sc0000087-1491911889:415087..415407Clytia hemisphaericaexon
TCONS_00008784-exon-sc0000087-1491911889:414482..414619TCONS_00008784-exon-sc0000087-1491911889:414482..414619Clytia hemisphaericaexon
TCONS_00008784-exon-sc0000087-1491911889:413488..413588TCONS_00008784-exon-sc0000087-1491911889:413488..413588Clytia hemisphaericaexon
TCONS_00008784-exon-sc0000087-1491911889:412558..412660TCONS_00008784-exon-sc0000087-1491911889:412558..412660Clytia hemisphaericaexon
TCONS_00008784-exon-sc0000087-1491911889:411808..411894TCONS_00008784-exon-sc0000087-1491911889:411808..411894Clytia hemisphaericaexon
TCONS_00008784-exon-sc0000087-1491911889:410723..411524TCONS_00008784-exon-sc0000087-1491911889:410723..411524Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000087supercontigsc0000087:410723..418587 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.0101	4.03194	1.61803	0.846576	0	0.613683	0.402128	5.53847e-10	5.41938	4.29813	2.40046	3.7613	1.81726	1.57395	1.66339	1.85016	0.612074	0.631733	4.59325	3.19019	0.628716	0.911082	3.89186	1.60889	0.794438	0	3.47519	5.11096	4.19962	4.27299
Blast
[Close]
BLAST of TCONS_00008784 vs. Swiss-Prot (Human)
Match: VINC (Vinculin OS=Homo sapiens GN=VCL PE=1 SV=4)

HSP 1 Score: 82.0333 bits (201), Expect = 4.991e-16
Identity = 56/147 (38.10%), Postives = 86/147 (58.50%), Query Frame = 2 
Query:  653 KWEEENNSIIKVAKLMADQMTQMADFHKGRNSRLKTKSDFVXXXXXXXXXXXXXSKFAAVVAQKCPDKSCQIDLLHYAELIPTMSTQLRIVASVKS-----INVNDETTD---AMLVINAGNLMKGVAGALKAAESASVKISTKQAY 1069
            KW  + N II  AK MA  M +M+   +G +    TK   +  AK IA  +  +++ A  VA++C DK  + +LL   E IPT+STQL+I+++VK+      N++DE ++    MLV NA NLM+ V   ++ AE+AS+KI T   +
Sbjct:  979 KWSSKGNDIIAAAKRMALLMAEMSRLVRGGSG---TKRALIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGF 1122
The following BLAST results are available for this feature:
BLAST of TCONS_00008784 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VINC4.991e-1638.10Vinculin OS=Homo sapiens GN=VCL PE=1 SV=4[more]
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