TCONS_00008371 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008371
Unique NameTCONS_00008371
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length206

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008371 ID=TCONS_00008371|Name=TCONS_00008371|organism=Clytia hemisphaerica|type=transcript|length=206bp
AAAGATATCCACACGTGTCAGCCAACACAAAAAGAacgttgaagatgaaa
aatgggaCATTTCGGGTATAACTAACCATGCTAAAGACTGTACCCAAGGA
CTTAATTGGAACGAAACTAGGCTTTTAAAGACTGAAGAGAACAAATTTGA
TAGAAAAGTGCGAGAGGCATTGGAAATCCAATTCCGTCAGACGGCGCCAC
ATAGTG
Run BLAST on NCBI

transcript from alignment at sc0000084:582723..582928

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008371 ID=TCONS_00008371|Name=TCONS_00008371|organism=Clytia hemisphaerica|type=transcript|length=206bp|location=Sequence derived from alignment at sc0000084:582723..582928 (Clytia hemisphaerica)
CACTATGTGGCGCCGTCTGACGGAATTGGATTTCCAATGCCTCTCGCACT
TTTCTATCAAATTTGTTCTCTTCAGTCTTTAAAAGCCTAGTTTCGTTCCA
ATTAAGTCCTTGGGTACAGTCTTTAGCATGGTTAGTTATACCCGAAATGt
cccatttttcatcttcaacgtTCTTTTTGTGTTGGCTGACACGTGTGGAT
ATCTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004699XLOC_004699Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008371-exon-sc0000084-1491911889:582723..582928TCONS_00008371-exon-sc0000084-1491911889:582723..582928Clytia hemisphaericaexon
TCONS_00008371-exon-sc0000084-1510915933:582723..582928TCONS_00008371-exon-sc0000084-1510915933:582723..582928Clytia hemisphaericaexon
TCONS_00008371-exon-sc0000084-1575043694:582723..582928TCONS_00008371-exon-sc0000084-1575043694:582723..582928Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000084supercontigsc0000084:582723..582928 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.05716	0	0	5.07976	0	1.62893	1.96523	9.19912	9.01673	3.19105	10.8406	15.2704	6.09966	6.33456	3.47191	5.58884	8.03249	2.3523	12.9993	0	0	0	0	0	1.64117	1.4647	0	2.23689	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008371 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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