TCONS_00008226 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008226
Unique NameTCONS_00008226
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length154

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008226 ID=TCONS_00008226|Name=TCONS_00008226|organism=Clytia hemisphaerica|type=transcript|length=154bp
AATATTTTTATGTCACatatttttaaaacatatttttatttggatcTTTT
GGCTGTGAAACAAAGGGATTTGAAATAAATCAGAAGTTGCGCAATCTTTG
GTAGTGATTTGACCTTCAAGGGAGAAGTCTAGGGTTTTACAaatttaatc
gaac
Run BLAST on NCBI

transcript from alignment at sc0000082:271486..271639

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008226 ID=TCONS_00008226|Name=TCONS_00008226|organism=Clytia hemisphaerica|type=transcript|length=154bp|location=Sequence derived from alignment at sc0000082:271486..271639 (Clytia hemisphaerica)
gttcgattaaattTGTAAAACCCTAGACTTCTCCCTTGAAGGTCAAATCA
CTACCAAAGATTGCGCAACTTCTGATTTATTTCAAATCCCTTTGTTTCAC
AGCCAAAAgatccaaataaaaatatgttttaaaaatatGTGACATAAAAA
TATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004620XLOC_004620Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008226-exon-sc0000082-1491911889:271486..271639TCONS_00008226-exon-sc0000082-1491911889:271486..271639Clytia hemisphaericaexon
TCONS_00008226-exon-sc0000082-1510915933:271486..271639TCONS_00008226-exon-sc0000082-1510915933:271486..271639Clytia hemisphaericaexon
TCONS_00008226-exon-sc0000082-1575043694:271486..271639TCONS_00008226-exon-sc0000082-1575043694:271486..271639Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000082supercontigsc0000082:271486..271639 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008226 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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