TCONS_00007379 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007379
Unique NameTCONS_00007379
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1194

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007379 ID=TCONS_00007379|Name=TCONS_00007379|organism=Clytia hemisphaerica|type=transcript|length=1194bp
TGGGAATTGCCATTATAATTTCCTCGTTATAAATCGATataaaaaatcaa
caatttATGAAAGTTGCACAAGACATCTTAAGCACAAGACATTCATTCAA
ATCTCTTGTTTCCTGGCTAACACACATCCAGTTCTGACGaagtaaacaaa
ttcaaaacatgAACACTATTATAAGATGCTATCGAGTAATGGAAGTTCGA
AAAATCGCTTACAATTCTCAAATTAGACGGAAATGTACACTTTTAGAGAA
GGTATTCCGTGCACAAAACTTAAATCAAGCTGCTAAAATGTCATCTACAG
CATTAACAGAAGGAGGAAAAttattcgaaaaagaaattccatACATTACC
GAGCTCGAAGGAGATGTGGAAGGAATGAAGTTCACCATCAAAGGTGAAGG
GACTGGAGATGGAACTACTGGATTGATCAAATCCAAATATATCTGTACTA
CTGGTGATCTTCCCGTACCTTGGGCTACCATTTTGAGTAGCTTATCTTAC
GGTGTCTTCTGTTTCGCCAAATATCCACGTCACATTGCCGACTTTTTCAA
GAGCACACAACCTGACGGTTATTCACAAGATAGAAtcattagttttgatg
acgATGGTCAATATGACGTCAAAGCAAAAATCACTTACGAAGATGGAACC
CTTTATAACAGAGTCGTGCTTGATGGCACTGGATTCAAATCTAACGGTAA
CATTTTGGGAATGAGAGTTCTTTACCATTCACCACCGCACATCATCTACA
TCCTTCCTGATCGTAAAAACGGTGGCATGAAAATCGAATACAATAAGgct
tttgacGTTATGGGTGGAGGACATCAAATGACTCGCCACGCCCAATTCAA
CAAACCATTAGGAGCCTGGGAAGAGGATTATCCAATGTACCATCATCTTT
CTGTTTGGACATCTTTCGGTAAAGATCCAGATGATGATGAAACTGACCAT
TTAACCATCGTTGAAGTCATCAAAGCTATCGATTTGGACACTTACAAATA
AAGTTCGCATCTCGCCCGTAGTCGAATGTCAAAGCTTATAAAATAACATT
CGGCTGACGTAACAGTTTTATTTTGAACAcatgtttttatatatattcct
gtaaatttaataaattttgCACAAACACTTGCATTGtaaaaagaatacaa
aatttcATGACAAAAATGTTATTCCATCTATtgcttactcttag
Run BLAST on NCBI

protein sequence of green fluorescent protein

>TCONS_00007379-protein ID=TCONS_00007379-protein|Name=green fluorescent protein|organism=Clytia hemisphaerica|type=polypeptide|length=280bp
MNTIIRCYRVMEVRKIAYNSQIRRKCTLLEKVFRAQNLNQAAKMSSTALT
EGGKLFEKEIPYITELEGDVEGMKFTIKGEGTGDGTTGLIKSKYICTTGD
LPVPWATILSSLSYGVFCFAKYPRHIADFFKSTQPDGYSQDRIISFDDDG
QYDVKAKITYEDGTLYNRVVLDGTGFKSNGNILGMRVLYHSPPHIIYILP
DRKNGGMKIEYNKAFDVMGGGHQMTRHAQFNKPLGAWEEDYPMYHHLSVW
TSFGKDPDDDETDHLTIVEVIKAIDLDTYK
Run BLAST on NCBI

transcript from alignment at sc0000076:479746..484765+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007379 ID=TCONS_00007379|Name=TCONS_00007379|organism=Clytia hemisphaerica|type=transcript|length=5020bp|location=Sequence derived from alignment at sc0000076:479746..484765+ (Clytia hemisphaerica)
TGGGAATTGCCATTATAATTTCCTCGTTATAAATCGATataaaaaatcaa caatttATGAAAGTTGCACAAGACATCTTAAGCACAAGACATTCATTCAA GTAGGTACGGTTTTATTCTTTCCTAAACTTTCTTctgtcttttgatttct ttcaatgTGACTTTGTTCCAATACTTTGGAAACTAATTTTCGATTTCTGA CACCTTGTGGAAAAATATTGCAGTGATTTAACTATACAaaactatttttc aaattgacaaACTTCTAAGACGATACAAAAGTTTCTTGGCAAAGGGGCCA AGAACTTTGATTATTTCTGCTGATTAGATCATAGAATTTGATTTTTGGAG TATATTTCTtcttattatatacctgtaggcaaaagcagccattgaataat tcctgatataccatggctattataccacggtagaattttttttttttttt caaattttgctttcaaagtttgagtttttttgttgctcttgttgttatca aagaaattcattaaaataaatctattgtcaatttcatgaacaaattttat gacttaaagtaattaagaaaatcattaagaaAGAAagacattcgaacgtt cgattatgggagtgttttaagtGAAACGTTTGGctcggtgatgtatattc aactcggcttggcctcgttgaatattacatcacctcgggttaataaatct caataaccaacttttacccattgaatatctgcttattgtTAAACTCGCAG ATCTCTTGTTTCCTGGCTAACACACATCCAGTTCTGACGaagtaaacaaa ttcaaaacatgAACACTATTATAAGATGCTATCGAGTAATGGAAGTTCGA AAAATCGCTTACAATTCTCAAATTAGACGGAAATGTACACTTTTAGAGAA GGTAGGAATATATATTTATTGAGTTACGAGGCACAAATATCTGaacaatt cttgatatgcgtaagtcaagatgacgtcatattttttaacgaaagcaccc aaaaaagccggtttttgacctctaTCTTTAGTAACAGAGGgatcaaatcc cggcttttttagggtgtttccgctagaaaaatgacttacgcatatcaaga attaacAATCAAAATTTATGATTCCATATCGAGACTGTTCTTTCCAAATT TTAGCCTTATACTACgaaagcacccaaaaaagccggtttttgacctctaT CTTTAGTAACAGAGGgatcaaatcccggcttttttagggtgtttccgcta gaaaaatgacttacgcatatcaagaattaacAATCAAAATTTATGATTCC ATATCGAGACTGTTCTTTCCAAATTTTAGCCTTATACTACgaaagcaccc aaaaaagccggtttttgacctctaTCTTTAGTAACAGAGGgatcaaatcc cggcttttttagggtgtttccgctagaaaaatgacttacgcatatcaaga attaacAATCAAAATTTATGATTCCATATCGAGACTGTTCTTTCCAAATT TTAGCCTTATCACTAATGTATAGGTTCGTTTTATACCTTTTTTACTGAAA TTAGATAAGCAACCTTTTTCAAAGGAATATCAGGGTCTTCATTTCCCCCG AAACTTTCAAAAACGTCTTTTTTAGTTGTGTATGTTATCTTTAATCTATT CTAggtcggtgttttttacacttttggcgaaaacgtgacattaaattttc taaaaaacggtttttcttgaataataTAAGTTTCAACGAGGATTTTGGGa tgaaatcttccaaaaaggtgGAGCACACGAGCTTAGAGCTTTGGTTTTGG TCCCAGGAGCGAAGAAGGAttcaatattccaaaatattagATTTNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNTCCCAGctggaagattttttatttaggaaTAG AAAGTACATAAATGCTCCATCCTGCAAAATTTCAGTTCTAAAGCCacatt atatcaaaagttattgctcATGGAATCCATAATCCATTTTCATTATGGAA TCGTTTAATCCTAACGTGCTCCTAACTTTCAAAGGTTATAAGTACTAGCT TAGTTTCTCTAGAAGGCTCGGGAAAAAAGGAATGGAATCTTCAATCCTTT GCCGATCCCCTGATATCCAATTAAGAAAAGGTGCACTTTGTATTTATTTC TAAAACGTGTTTTAAAAAACTTCACGTTttcgccaaaagtgtaaaaaaca ccgaccTAGGTATTCCGTGCACAAAACTTAAATCAAGCTGCTAAAATGTC ATCTACAGCATTAACAGAAGGAGGAAAAttattcgaaaaagaaattccat ACATTACCGAGCTCGAAGGAGATGTGGAAGGAATGAAGTTCACCATCAAA GGTGAAGGGACTGGAGATGGAACTACTGGATTGATCAAATCCAAATATAT CTGTACTACTGGTGATCTTCCCGTACCTTGGGCTACCATTTTGAGTAGCT TATCTTACGGTGTCTTGTAAGTATAGCCACAGATATATAAAGCCCGATGa cggtaggaaatcctaccaaggtattaaaatagaatttcagcgcgtgacca atcagaagcttcgtgagttttcaaaattatagCAACAATATCAGCTTATC TTATGGTGTTTTGTAAGTATCACAATTAGAGGTCCGAAACATATTGTCTA CTTCACCTGTTTTGATGGAATGGCAGTCTTTACACCTtatttttggggta aatttaaACATTTAGGCAAGAGTGGAAAAAATGGTGGAAGAGCTTTTCTA CTTTTAACACCCTTTAAACGTTTTCGTTAAGAAAAGCATGCATGAAAAAa atctggattttcattggggtacttttctttgtttttttttcttaacctga AAAGGTTCTTTGGCTtcctttattttttgttattccaAAATGGCTTCACT TTGGAGACGCTGGTCTACGCGCTGGGTATTCACTACCGTGGCTTGTATGT AAAGATTTTCAAGAATTGTTTGAAATGCTAGTTAAGTGGGCCTATTAGTT AAACACATTTTCAAGGTCTTTTCAAAATAAGCTATTTTTGCTCAACCAAT AGACTTCGTTATTGCTTCATATATTTTCATAGCTGTTTCGCCAAATATCC ACGTCACATTGCCGACTTTTTCAAGAGCACACAACCTGACGGTTATTCAC AAGATAGAAtcattagttttgatgacgATGGTCAATATGACGTCAAAGCA AAAATCACTTACGAAGATGGAACCCTTTATAACAGAGTCGTGCTTGATGG TAAGTAGGTCACACGCATCCCTCTGATATATTTTTATAGGGGATATGCTA ATCCCGTGTAttaaattcccgtccgagagttaccctaAATTTAGGGTAAC CTTACAGCCTAGACGATCCCAATAATTTGCATGACATCCATATAACATAC TTAAACTTTGAAACAAGGAAGAGGTGGGTGTAGAGGATACAACAATGACA GTAAATTTGCTCTACTTAACTCTTGTGACCAATTTGAAATTAAGCTTTTT GATAAAGGTACACATATGGTTATAGGAAGCCACTTTTCTGAGGATCAAAA GTATTTGAAATGATCATTTTGATATTAGgctacttttatttattttactt aACAGGCACTGGATTCAAATCTAACGGTAACATTTTGGGAATGAGAGTTC TTTACCATTCACCACCGCACATCATCTACATCCTTCCTGATCGTAAAAAC GGTGGCATGAAAATCGAATACAATAAGGTAAGGTCTTACTCTTATCAATT AGGTTTTTCATAACAGTTTTAAtaaaccttttcaaaaattacgtcacGTG CATCCTCATTatctcgtattcaaacaatcaCCATAGTGATTATATCCCtt gagaaaattgatttttttatgaatagaaagtagttttaataaaatccgct gcgAGTTGatcaccttggcaataatttcaaaacgaggcaagtgatgtcgT GACgtcatttatgaaaaggtctattagtttGACCCATACTTTGTGATTTT ACGGCATACAAATTTTCGtctctttgttttttaaatttcggcCAGAATAT AGAGGGTGCATCTTTTCGGTCATGAACGCTGTACAAAATACTCATTCCAA TTCAATCGGTATTTGCCAGCAAAAACCATGTTTCCAATGTCGATTTTAGT AATCAACGATTctccttttttaggcttttgacGTTATGGGTGGAGGACAT CAAATGACTCGCCACGCCCAATTCAACAAACCATTAGGAGCCTGGGAAGA GGATTATCCAATGTACCATCATCTTTCTGTTTGGACATCTTTCGGTAAAG ATCCAGATGATGATGAAACTGACCATTTAACCATCGTTGAAGTCATCAAA GCTATCGATTTGGACACTTACAAATAAAGTTCGCATCTCGCCCGTAGTCG AATGTCAAAGCTTATAAAATAACATTCGGCTGACGTAACAGTTTTATTTT GAACAcatgtttttatatatattcctgtaaatttaataaattttgCACAA ACACTTGCATTGtaaaaagaatacaaaatttcATGACAAAAATGTTATTC CATCTATtgcttactcttag

Coding sequence (CDS) from alignment at sc0000076:479746..484765+

>TCONS_00007379 ID=TCONS_00007379|Name=TCONS_00007379|organism=Clytia hemisphaerica|type=CDS|length=4215bp|location=Sequence derived from alignment at sc0000076:479746..484765+ (Clytia hemisphaerica)
atgAACACTATTATAAGATGCTATCGAGTAATGGAAGTTCGAAAAATCGC
TTACAATTCTCAAATTAGACGGAAATGTACACTTTTAGAGAAGGTATTCC
GTGCACAAAACTTAAATCAAGCTGCTAAAATGTCATCTACAGCATTAACA
GAAGGAGGAAAAttattcgaaaaagaaattccatACATTACCGAGCTCGA
AGGAGATGTGGAAGGAATGAAGTTCACCATCAAAGGTGAAGGGACTGGAG
ATGGAACTACTGGATTGATCAAATCCAAATATATCTGTACTACTGGTGAT
CTTCCCGTACCTTGGGCTACCATTTTGAGTAGCTTATCTTACGGTGTCTT
CTGTTTCGCCAAATATCCACGTCACATTGCCGACTTTTTCAAGAGCACAC
AACCTGACGGTTATTCACAAGATAGAAtcattagttttgatgacgATGGT
CAATATGACGTCAAAGCAAAAATCACTTACGAAGATGGAACCCTTTATAA
CAGAGTCGTGCTTGATGGCACTGGATTCAAATCTAACGGTAACATTTTGG
GAATGAGAGTTCTTTACCATTCACCACCGCACATCATCTACATCCTTCCT
GATCGTAAAAACGGTGGCATGAAAATCGAATACAATAAGgcttttgacGT
TATGGGTGGAGGACATCAAATGACTCGCCACGCCCAATTCAACAAACCAT
TAGGAGCCTGGGAAGAGGATTATCCAATGTACCATCATCTTTCTGTTTGG
ACATCTTTCGGTAAAGATCCAGATGATGATGAAACTGACCATTTAACCAT
CGTTGAAGTCATCAAAGCTATCGATTTGGACACTTACAAATAAatgAACA
CTATTATAAGATGCTATCGAGTAATGGAAGTTCGAAAAATCGCTTACAAT
TCTCAAATTAGACGGAAATGTACACTTTTAGAGAAGGTATTCCGTGCACA
AAACTTAAATCAAGCTGCTAAAATGTCATCTACAGCATTAACAGAAGGAG
GAAAAttattcgaaaaagaaattccatACATTACCGAGCTCGAAGGAGAT
GTGGAAGGAATGAAGTTCACCATCAAAGGTGAAGGGACTGGAGATGGAAC
TACTGGATTGATCAAATCCAAATATATCTGTACTACTGGTGATCTTCCCG
TACCTTGGGCTACCATTTTGAGTAGCTTATCTTACGGTGTCTTCTGTTTC
GCCAAATATCCACGTCACATTGCCGACTTTTTCAAGAGCACACAACCTGA
CGGTTATTCACAAGATAGAAtcattagttttgatgacgATGGTCAATATG
ACGTCAAAGCAAAAATCACTTACGAAGATGGAACCCTTTATAACAGAGTC
GTGCTTGATGGCACTGGATTCAAATCTAACGGTAACATTTTGGGAATGAG
AGTTCTTTACCATTCACCACCGCACATCATCTACATCCTTCCTGATCGTA
AAAACGGTGGCATGAAAATCGAATACAATAAGgcttttgacGTTATGGGT
GGAGGACATCAAATGACTCGCCACGCCCAATTCAACAAACCATTAGGAGC
CTGGGAAGAGGATTATCCAATGTACCATCATCTTTCTGTTTGGACATCTT
TCGGTAAAGATCCAGATGATGATGAAACTGACCATTTAACCATCGTTGAA
GTCATCAAAGCTATCGATTTGGACACTTACAAATAAatgAACACTATTAT
AAGATGCTATCGAGTAATGGAAGTTCGAAAAATCGCTTACAATTCTCAAA
TTAGACGGAAATGTACACTTTTAGAGAAGGTATTCCGTGCACAAAACTTA
AATCAAGCTGCTAAAATGTCATCTACAGCATTAACAGAAGGAGGAAAAtt
attcgaaaaagaaattccatACATTACCGAGCTCGAAGGAGATGTGGAAG
GAATGAAGTTCACCATCAAAGGTGAAGGGACTGGAGATGGAACTACTGGA
TTGATCAAATCCAAATATATCTGTACTACTGGTGATCTTCCCGTACCTTG
GGCTACCATTTTGAGTAGCTTATCTTACGGTGTCTTCTGTTTCGCCAAAT
ATCCACGTCACATTGCCGACTTTTTCAAGAGCACACAACCTGACGGTTAT
TCACAAGATAGAAtcattagttttgatgacgATGGTCAATATGACGTCAA
AGCAAAAATCACTTACGAAGATGGAACCCTTTATAACAGAGTCGTGCTTG
ATGGCACTGGATTCAAATCTAACGGTAACATTTTGGGAATGAGAGTTCTT
TACCATTCACCACCGCACATCATCTACATCCTTCCTGATCGTAAAAACGG
TGGCATGAAAATCGAATACAATAAGgcttttgacGTTATGGGTGGAGGAC
ATCAAATGACTCGCCACGCCCAATTCAACAAACCATTAGGAGCCTGGGAA
GAGGATTATCCAATGTACCATCATCTTTCTGTTTGGACATCTTTCGGTAA
AGATCCAGATGATGATGAAACTGACCATTTAACCATCGTTGAAGTCATCA
AAGCTATCGATTTGGACACTTACAAATAAatgAACACTATTATAAGATGC
TATCGAGTAATGGAAGTTCGAAAAATCGCTTACAATTCTCAAATTAGACG
GAAATGTACACTTTTAGAGAAGGTATTCCGTGCACAAAACTTAAATCAAG
CTGCTAAAATGTCATCTACAGCATTAACAGAAGGAGGAAAAttattcgaa
aaagaaattccatACATTACCGAGCTCGAAGGAGATGTGGAAGGAATGAA
GTTCACCATCAAAGGTGAAGGGACTGGAGATGGAACTACTGGATTGATCA
AATCCAAATATATCTGTACTACTGGTGATCTTCCCGTACCTTGGGCTACC
ATTTTGAGTAGCTTATCTTACGGTGTCTTCTGTTTCGCCAAATATCCACG
TCACATTGCCGACTTTTTCAAGAGCACACAACCTGACGGTTATTCACAAG
ATAGAAtcattagttttgatgacgATGGTCAATATGACGTCAAAGCAAAA
ATCACTTACGAAGATGGAACCCTTTATAACAGAGTCGTGCTTGATGGCAC
TGGATTCAAATCTAACGGTAACATTTTGGGAATGAGAGTTCTTTACCATT
CACCACCGCACATCATCTACATCCTTCCTGATCGTAAAAACGGTGGCATG
AAAATCGAATACAATAAGgcttttgacGTTATGGGTGGAGGACATCAAAT
GACTCGCCACGCCCAATTCAACAAACCATTAGGAGCCTGGGAAGAGGATT
ATCCAATGTACCATCATCTTTCTGTTTGGACATCTTTCGGTAAAGATCCA
GATGATGATGAAACTGACCATTTAACCATCGTTGAAGTCATCAAAGCTAT
CGATTTGGACACTTACAAATAAatgAACACTATTATAAGATGCTATCGAG
TAATGGAAGTTCGAAAAATCGCTTACAATTCTCAAATTAGACGGAAATGT
ACACTTTTAGAGAAGGTATTCCGTGCACAAAACTTAAATCAAGCTGCTAA
AATGTCATCTACAGCATTAACAGAAGGAGGAAAAttattcgaaaaagaaa
ttccatACATTACCGAGCTCGAAGGAGATGTGGAAGGAATGAAGTTCACC
ATCAAAGGTGAAGGGACTGGAGATGGAACTACTGGATTGATCAAATCCAA
ATATATCTGTACTACTGGTGATCTTCCCGTACCTTGGGCTACCATTTTGA
GTAGCTTATCTTACGGTGTCTTCTGTTTCGCCAAATATCCACGTCACATT
GCCGACTTTTTCAAGAGCACACAACCTGACGGTTATTCACAAGATAGAAt
cattagttttgatgacgATGGTCAATATGACGTCAAAGCAAAAATCACTT
ACGAAGATGGAACCCTTTATAACAGAGTCGTGCTTGATGGCACTGGATTC
AAATCTAACGGTAACATTTTGGGAATGAGAGTTCTTTACCATTCACCACC
GCACATCATCTACATCCTTCCTGATCGTAAAAACGGTGGCATGAAAATCG
AATACAATAAGgcttttgacGTTATGGGTGGAGGACATCAAATGACTCGC
CACGCCCAATTCAACAAACCATTAGGAGCCTGGGAAGAGGATTATCCAAT
GTACCATCATCTTTCTGTTTGGACATCTTTCGGTAAAGATCCAGATGATG
ATGAAACTGACCATTTAACCATCGTTGAAGTCATCAAAGCTATCGATTTG
GACACTTACAAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004150XLOC_004150Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007379-exon-sc0000076-1491911889:479746..479845TCONS_00007379-exon-sc0000076-1491911889:479746..479845Clytia hemisphaericaexon
TCONS_00007379-exon-sc0000076-1510915933:479746..479845TCONS_00007379-exon-sc0000076-1510915933:479746..479845Clytia hemisphaericaexon
TCONS_00007379-exon-sc0000076-1575043694:479746..479845TCONS_00007379-exon-sc0000076-1575043694:479746..479845Clytia hemisphaericaexon
TCONS_00007379-exon-sc0000076-1491911889:480496..480646TCONS_00007379-exon-sc0000076-1491911889:480496..480646Clytia hemisphaericaexon
TCONS_00007379-exon-sc0000076-1510915933:480496..480646TCONS_00007379-exon-sc0000076-1510915933:480496..480646Clytia hemisphaericaexon
TCONS_00007379-exon-sc0000076-1575043694:480496..480646TCONS_00007379-exon-sc0000076-1575043694:480496..480646Clytia hemisphaericaexon
TCONS_00007379-exon-sc0000076-1491911889:482405..482661TCONS_00007379-exon-sc0000076-1491911889:482405..482661Clytia hemisphaericaexon
TCONS_00007379-exon-sc0000076-1510915933:482405..482661TCONS_00007379-exon-sc0000076-1510915933:482405..482661Clytia hemisphaericaexon
TCONS_00007379-exon-sc0000076-1575043694:482405..482661TCONS_00007379-exon-sc0000076-1575043694:482405..482661Clytia hemisphaericaexon
TCONS_00007379-exon-sc0000076-1491911889:483278..483444TCONS_00007379-exon-sc0000076-1491911889:483278..483444Clytia hemisphaericaexon
TCONS_00007379-exon-sc0000076-1510915933:483278..483444TCONS_00007379-exon-sc0000076-1510915933:483278..483444Clytia hemisphaericaexon
TCONS_00007379-exon-sc0000076-1575043694:483278..483444TCONS_00007379-exon-sc0000076-1575043694:483278..483444Clytia hemisphaericaexon
TCONS_00007379-exon-sc0000076-1491911889:483801..483922TCONS_00007379-exon-sc0000076-1491911889:483801..483922Clytia hemisphaericaexon
TCONS_00007379-exon-sc0000076-1510915933:483801..483922TCONS_00007379-exon-sc0000076-1510915933:483801..483922Clytia hemisphaericaexon
TCONS_00007379-exon-sc0000076-1575043694:483801..483922TCONS_00007379-exon-sc0000076-1575043694:483801..483922Clytia hemisphaericaexon
TCONS_00007379-exon-sc0000076-1491911889:484369..484765TCONS_00007379-exon-sc0000076-1491911889:484369..484765Clytia hemisphaericaexon
TCONS_00007379-exon-sc0000076-1510915933:484369..484765TCONS_00007379-exon-sc0000076-1510915933:484369..484765Clytia hemisphaericaexon
TCONS_00007379-exon-sc0000076-1575043694:484369..484765TCONS_00007379-exon-sc0000076-1575043694:484369..484765Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
green fluorescent proteinTCONS_00007379-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000076supercontigsc0000076:479746..484765 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1627.06 1622.72 2733.46 2959.45 15.6535 12.116 2.60587 3.62524 0.920689 3.17771 0.373103 0.894681 0.211584 0.335237 0.247921 0.360789 17.9298 17.1517 0 0.0801312 56.9774 34.7254 396.945 328.538 5.4856 8.7838 19.1852 25.8633 165.227 198.329
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000786Green_fluorescent_prot
IPR011584GFP-related
IPR009017GFP
Vocabulary: Biological Process
TermDefinition
GO:0006091generation of precursor metabolites and energy
GO:0008218bioluminescence
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008218 bioluminescence
biological_process GO:0006091 generation of precursor metabolites and energy
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007379 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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