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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073846 ID=TCONS_00073846|Name=TCONS_00073846|organism=Clytia hemisphaerica|type=transcript|length=1495bp
cccaaattttgcacaaagaagccCCTCATAAATATAAAAATGCGTGCCAA
AAATCAAGTCTGACACATGACGTAAGCAGGCTTACGGCGGAAAAACGCAA
GACTACGTAATACACCCCTGCCTAGGCTGGTTAAGGCAAAACTCGAAGTA
CTCGTAACTCACGAACCAAAGAGTTCCAGAACCCCAAATTTGGCACAAAA
CAGCCCAGCCCCTCATGGATGCGAACTTGCATGCAAAATTTGCAGCTTAT
ACGATAACGCCGTCGGAAGTTATTTTaagattccgtagattagtaatctg
TGAAGtgagattccgcaaattacaaatctacggaatctgctaATAACTCT
CGAAGCATTTGGTtttttcaaaccaaactttgcacGCATCTGGACATCCA
TGGTCTGGTCTGGTCTGTGCAAAATTTGAACGTTTGAATAGGCCGTTAAC
GGGAACTATGACGGAATTACGTAAAATCAAGTAAGGGACTTTATAAGCCC
TtgttgaaaaaactcaaaatctttGTATCTCCCGAAGATGCGTTTTAAGA
GCCCAAGATTTACACGAAGAAGCTCCTCGTAAATATGAAAAAGCGTGCCA
AAAATCAAGACTGACGGATGACGTAACCGAGACCTACAGCGGAAAAACCT
AAGACTACGTAATAAAATCTGCTAATAACTCTCGAAGGATTTGGTttttt
caaaccaaactttgcacACATCTGGACATCCATAAGACGCTGGTCTGTGC
CAAATTTGATCGTTTGAATAGGCCGTTAACGGGAGCTATGACGGAATAAT
GTAAAATCACGTAAGTGACTACattgtaaatttggtcgggaaaatgtgac
gaatttaaaattttggtcgggtaaaagtgacaaaaatgcctctaggtaGG
TTTTGGGTATAAAAATTTCGGGTAAAAGTTTCGGTCGTGTATTAAAAAAA
CCGGGTCAAAGTTTTGGTCCGGTGATAAAATGTCGAGTAAAAATTTCGTA
GCCCCCtaaaaaattttcgtcacttcccccgacatttttccCCGAATAGG
TACAACCTTTCTTATCAGACAATCTTCGAATGTGCATTTTGACACAAGTT
AACATCCTAAAAAATCGCATTTCGACGAGAAATGGCAAGCTACTTATTCA
AAGCAGATCATTTTACGATTAACCTTCTAAATTCTATCCAAAGAAGACTA
AATTTAAGATTGCTAGCTAGGAATTCCAGGCaccgtttatgagagtttct
tgttgactgtgagtttcaattttatcgaataaggggGCATAAAGAATAGT
AGAAAGTCGAAcgtagagagcgtcaactgtatttttttgaattttgttgt
ttaagcgattattcaatttttcttaaataaaggtaaaaagtttccaaaat
aGTAGAATGGTGACCTCTATGCTCTGTTACGCCTACTACACTACTTCTCT
TCTActactcttctgtgcttaaaATTGTAGGAGGGATCATTTTCC Run BLAST on NCBI transcript from alignment at scaffold_98:238962..240456 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073846 ID=TCONS_00073846|Name=TCONS_00073846|organism=Clytia hemisphaerica|type=transcript|length=1495bp|location=Sequence derived from alignment at scaffold_98:238962..240456 (Clytia hemisphaerica)
GGAAAATGATCCCTCCTACAATtttaagcacagaagagtagTAGAAGAGA
AGTAGTGTAGTAGGCGTAACAGAGCATAGAGGTCACCATTCTACtatttt
ggaaactttttacctttatttaagaaaaattgaataatcgcttaaacaac
aaaattcaaaaaaatacagttgacgctctctacgTTCGACTTTCTACTAT
TCTTTATGCccccttattcgataaaattgaaactcacagtcaacaagaaa
ctctcataaacggtGCCTGGAATTCCTAGCTAGCAATCTTAAATTTAGTC
TTCTTTGGATAGAATTTAGAAGGTTAATCGTAAAATGATCTGCTTTGAAT
AAGTAGCTTGCCATTTCTCGTCGAAATGCGATTTTTTAGGATGTTAACTT
GTGTCAAAATGCACATTCGAAGATTGTCTGATAAGAAAGGTTGTACCTAT
TCGGggaaaaatgtcgggggaagtgacgaaaattttttaGGGGGCTACGA
AATTTTTACTCGACATTTTATCACCGGACCAAAACTTTGACCCGGTTTTT
TTAATACACGACCGAAACTTTTACCCGAAATTTTTATACCCAAAACCtac
ctagaggcatttttgtcacttttacccgaccaaaattttaaattcgtcac
attttcccgaccaaatttacaatGTAGTCACTTACGTGATTTTACATTAT
TCCGTCATAGCTCCCGTTAACGGCCTATTCAAACGATCAAATTTGGCACA
GACCAGCGTCTTATGGATGTCCAGATGTgtgcaaagtttggtttgaaaaa
ACCAAATCCTTCGAGAGTTATTAGCAGATTTTATTACGTAGTCTTAGGTT
TTTCCGCTGTAGGTCTCGGTTACGTCATCCGTCAGTCTTGATTTTTGGCA
CGCTTTTTCATATTTACGAGGAGCTTCTTCGTGTAAATCTTGGGCTCTTA
AAACGCATCTTCGGGAGATACaaagattttgagttttttcaacaAGGGCT
TATAAAGTCCCTTACTTGATTTTACGTAATTCCGTCATAGTTCCCGTTAA
CGGCCTATTCAAACGTTCAAATTTTGCACAGACCAGACCAGACCATGGAT
GTCCAGATGCgtgcaaagtttggtttgaaaaaACCAAATGCTTCGAGAGT
TATtagcagattccgtagatttgtaatttgcggaatctcaCTTCAcagat
tactaatctacggaatcttAAAATAACTTCCGACGGCGTTATCGTATAAG
CTGCAAATTTTGCATGCAAGTTCGCATCCATGAGGGGCTGGGCTGTTTTG
TGCCAAATTTGGGGTTCTGGAACTCTTTGGTTCGTGAGTTACGAGTACTT
CGAGTTTTGCCTTAACCAGCCTAGGCAGGGGTGTATTACGTAGTCTTGCG
TTTTTCCGCCGTAAGCCTGCTTACGTCATGTGTCAGACTTGATTTTTGGC
ACGCATTTTTATATTTATGAGGggcttctttgtgcaaaatttggg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073846-exon-scaffold_98-1491911889:238962..240456 | TCONS_00073846-exon-scaffold_98-1491911889:238962..240456 | Clytia hemisphaerica | exon |
| TCONS_00073846-exon-scaffold_98-1510915933:238962..240456 | TCONS_00073846-exon-scaffold_98-1510915933:238962..240456 | Clytia hemisphaerica | exon |
| TCONS_00073846-exon-scaffold_98-1575043694:238962..240456 | TCONS_00073846-exon-scaffold_98-1575043694:238962..240456 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_98 | supercontig | scaffold_98:238962..240456 . |
Blast
The following BLAST results are available for this feature:
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