TCONS_00073683 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00073683
Unique Name	TCONS_00073683
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1591

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_97:871516..887342+

transcript sequence

>TCONS_00073683 ID=TCONS_00073683|Name=TCONS_00073683|organism=Clytia hemisphaerica|type=transcript|length=1591bp
gAAATGCCTATTGAAAACTCAAGaaCTCCAATACCGGAAAACGAATCGAC
CATTGGTGATCAACGTCCTATACATATCGACCGCGTGCCTGCATCCACGG
CTCTTGGCTTAGGCATTATCGGAGGTAATCATATTGGAATTTTCATCTCG
GATATCCAGAAAGGAAGTTTAGCATCACAATCGAACCTACGGTGTGGTGA
CCAAATTCTAAAGTACAATGATAAAGACATGGGTAACATTACCTTAGAAG
AAGCCATCTTGGAATTGGGCAAACATACTGAAGTATCAGACTTACAGGTT
CAATACAATCCGCCAGGATATCGCAAAGCCCAAACACAAGCCAACGATTC
TTTCTACGTCCGCGCTCAATTCGATCGTTTCCCGCATGGGAAAGGAGAGC
TTAGTTTCAGGAAAGGAGACATCCTTCACGTGACCGAAACTTTTTACAAA
GGACAGTTGGGTGTCTGGAGAGCTAGTATTGTCAATGATAATGAAACGAC
AAAACCTTCGAGCGGAAAGTTGACGAAAGGAAAAATTCCAAGCAAAAGGA
AAGCGGAACAAGAACTATTACTACGGCGATCCTCATCTTACGGCGACGAC
AAATCGAAGAATCGTAAATCGCTATTCCGTCGCTCCAAGAAAGGTTCTTC
GCATCACGCTATCAATCATTCTCGCGAGAGTAGTGATTCCAaagctgaaa
tcgaaagtacgGTTAGCGGTGGCACGTCCTTTGTTTTCATATCAGACGAC
TTCAACACATATCAATTCGTCAAACAGTTGGAGTGTAAATTCCCAAGACC
AGTTATTATCGTTGGTCCAATGGCCGAACCAATCTGTGATAAACTGGTCA
TCCATTGGAGTATGAATTTCGCACGCTGCTTTGAAGTGGTACACTCTACA
CAAGACGAGATGTCGGAGAACGTAGATAGCGGAACTTATCTGGATTACAA
ATTACGGAAAGGAGGTGATCGCTATGAGGTTGTCACTGCAAACGCTGTCA
AAGAATTCTCTCAAAAACAGACGAAACATTGTTTGTTGGATATCAACATG
GACGCCATCGAAAGAATCATTAACGCTCATCTATACCCTATcattattta
tttaaaattcaaatcTGGTAAAATCATAAAAGATATGAGGGACGGACATT
TCATCAAAGACAAACTATCGACAAAAGAGGCTAAAGATTTGTACGATACT
TACctcaaacaagaaaaagattctaaacattttttcaatGTGACAATCAA
CGCGGTCAGCAATTTGCACCAAGTTTGCAAAGATATCAACGATGCTGTTT
TGGAACAACAAAAGAAAGCTTTATGGGTCAACAatgatgaataaaagaaa
atcaccGATCTCTAAAATCTAGGCTGAAAAAATTATCTCCTAATTTGACA
AACGGCAAATTGTTCCCAGGATCATAGATTTCTTAAATTTCTGCtaatcc
tctagcgaaaagagtttctgataggaagtatatctctagaggtctgcgat
tcagataATTAATTTCGAGAATCAATAGTACAATACAATGAACTTAATTT
CTTGATAACAAGCAATCTCTATCTATCATAAGTGTTATTCG

Run BLAST on NCBI

transcript from alignment at scaffold_97:871516..887342+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00073683 ID=TCONS_00073683|Name=TCONS_00073683|organism=Clytia hemisphaerica|type=transcript|length=15827bp|location=Sequence derived from alignment at scaffold_97:871516..887342+ (Clytia hemisphaerica)
gAAATGCCTATTGAAAACTCAAGGTAAATCTTTTATAGAAGGAAAATcat
atgatatttttttttcatccacACACTCACACATACACTTATTTAATGCA
TACACACCTtaaggctggtctccacttgcgcacgCTGTAATCGCAGtttt
tggcttcaatcttttttgcttggaaaaaagattacgtcataaaaatgtag
cgcgcgctcgaaagaaaagttgaacacatttcaactttttccaaccgtta
cgtcagatcgcaccaatggagttgcttcatttttcttttgaccaatagcg
tggaagctttgcttgAAAAGTGCGACttaagcgcgcgcaagtggagaccg
gcctttatacagttgactctcgctaattcgaagtCAAACGGGAAAGTcta
atttgttcaaatttcgaAAGGTTTTTCTTTGACGGggtgaaaaatacaaa
atgacaaaatgacaaaaaaaaaacagaaattttCTGGTTTGTTCGATGGa
gccattttttgagtttttacaaTAAACCATTAAAAATTCTATTATATAac
ttcaaaatatcttcaaaaaaattcaggaaattcTAGAGATTAGTTTTTTT
ATAGCAacaaaattgagtaattttatCACCATgaattttgatatcttttt
gGATTCAAATGATTATAGGGAATGAGGCAGTTAAGCGGCGgactgagaat
tagttcgaattatagaaagactcgaataatagaagttcgaattagcgaga
gtccatTGTGAGACAAAATGGCCTTTATAGTTTACTGATTCTTAGTAATC
TGTCATCACAAGCGACTttaaatgcaattaaaatggaACGTCTCCGTGTA
AAACGAACAATACGAAACGTTCTTTAACATTTAGGAAGGTTCttgtttag
acggccgactttctgccctgcctattatAATTGTTTGAGTAGGCGAAAAG
TGGGCGCAAAGTTGGTGCTGAAATCTTTGCTTCGAAAGTCTTCGAAGACT
TTGCATTggcacaattagaataggcagggtgGAAAGTgtgccgtctaaac
tagagctaagaacGGGAGAGAACGATCTTGTTCGTTCCCTTTATTTACTA
GTTTAGGCGTGTCTTAGAAAGTTCAGGGACGGTTAAGAATGTTTATTAAC
GTTCCTTAAACGTACCTGAGCGTTCTAACCAAGTTGAATATTAACCTttg
aaaacaaagttttgtcCGCAAGCGTTCTGGAACGATCAAGAAAGTTCTTA
AACATTTTCCAGGAGCGCTACGGAACCTTCAGGAGCGTCTCAAGgacatt
tcatttcatttgtatTTCAAATCGCTTGTGAATAGATCTTAtatatcgga
gttttttatttttctaaaaaagcaatgcattgtgggattgtttcgggagt
cttgcaatagaatttcttcgaggatttctattgtaatactcccgaaacaa
tcccacaatgcatcgcttttttagaaaaataaaaaaatccgataagatct
attacaCATATTAGCTGACGTACCAGTACAAATAACTTTACGCACTTTTC
TATgtacttccttcaacttttcattttctctagTACGCAATCGACACCAT
GCACTCCACGCAGATCAGTTATATCGTCTCCCGCTTTCAATAAACGAGCC
GGGCGGAATTCTGTCTCAGGGTTGACCGGAAATCTGTCCGCCCCCGGAAC
GCCCGTCACAATGCACGTACGCCTGAGTTCAAACACAAGTTCGTCTTCTG
ACCACTCTAAATTCTATTattcagaaaataaaatgtaagTTAACGAAGAT
ATAATTCCAAATAGCTCTCATCTCGATCTTTACACTTGTACTTTGAAATT
taacagaaactttcgcgggcagaaactcTCGCGAGGttgcaaaatcgcga
aatttcgcgaatttaactTTTGGAacgaattttagaattttattttGCAG
GCAAAAAGCGATAAAAATGCACAAAAGCTGAAAACTGAgtataaaataac
aaaaaagtgtacttttggtgggaaaatttctcgtgtaatttcttacttgg
cagaaagtttcggaaaaaagggcaaaaatcgCGAAAAGTTTCTACCCGCG
AAAGTTTCGGGTTAATTCAGAAAAGGATCCGTCTTGAACGTAAAGTAAAT
GCCACAAACTAGACTCATTCAAGCGCATCAAAGCTAATAGCCTAGACAAA
GAAAACTCCTAAAAGAGACACGCTAAGCACACTGGGGCTAAGATAAAATC
AATCGatttaatcaattaaaattgcgttttattatttattagaaCTCCAA
TACCGGAAAACGAATCGACCATTGGTGATCAACGTCCTATACATATCGAC
CGCGTGCCTGCATCCACGGCTCTTGGCTTAGGTAAGCaatgttaaaagtt
cttccatCTCAGGTGGATTTCTTTTCTGTCTAGGTGAAGTATGAAGTTAC
TTTTCTGTCTCCAAGTTCTGCgtaattgaccaaaatttcaaggaaTATGT
GCTAATTTTCTGTGTAACAAATTATTTCCTGTCTCAAACGAAAAACCTTT
GACTACTGGGTAAGgtgaacttcaaaaatcatttctcaGACTTTTAAAGA
ATCAGTATTAACCGTGCTAACATATAGGCCAtctcacagtcgcaaagcgt
aatgggtaatcaggactgcgCTCTAATGACggcttactattggtccaaag
ttttgaaaaattttgaagattatttCCCGTCTAGCCAACAGAAAGCCGTT
ATGGAAGTgtaatcagtcctgattacccatgatccatttcgactgtgaaa
tggcctattttgGGACAGATCAATAAGGAGCAATGGCCAAGTGGTTTAAG
GCGCTAGCGCTAAAATTGAAGAGTTCCCAGTTCGAATCCTttctccttcc
aatgttccgttcagtccATTGATAATCAAGTCGGCTGGTAGTGAACCATT
GAACTATCTAGAAATCCTCGATTACTGAGATTTCTATTTTCGAACGTTTA
TAATGAAATTACGCGTTGGAATGAGACGATATGATACTCGAGGCCTctct
tttcaaaattgaatCCCTTAAAATAGATcccaggcccggcggaacaaccg
taaaattGGGGAGTCTGAAGGctaaaaatgagctaaaattcgCTAGCAAT
TTGAgaagaaaaatctcttttgcTCAAAAAtagggaggctgaagtctccc
cgatcttcccgcttccgccgggcctggaTCCTCTGCAATAAGAATCTGAA
TCACTACCTTTTCATGACTTTCACAACAGGCATTATCGGAGGTAATCATA
TTGGAATTTTCATCTCGGATATCCAGAAAGGAAGTTTAGCATCACAATCG
AACCTACGGTGTGGTGACCAAATTCTAAAGGTAAACTTCTTATCAATGTT
CAACCGGGGTCTTGAAAATTGACAATTAGTTTTAAAAATACCGCTTCgtt
gaaatcaccaaaaaaattgACCTAATGTCAACCAAGAAAATTTGGTAGTA
CAGTGGAGTCTATTTACCTCGAACCTCTATAAGTCGaatgtctccataac
tcgaacaagctttctcgttccttcagttaacaatgccttaaagGCTACAT
acacacaatatattgtcaggcaatacaTTGATCATATACTGCTGAGTGCC
GGCagtatattgaaaaggtgtccgcaatgtATTGTCAGTttgatttgcaa
ttttccaacaatatagggggattgttacagaaagaaaattccttttttta
ataGAGGTCAGGATATATTATTTACTttgtacattacggtccgaaaatga
tattgtcaaatattgtttgtcaatatattgtgtagccCTTTACAAACCCT
ActcaataactcgaaatttccttagcTCGAACAAATTTTAATTCCCCGTG
CGTTTTCGAGctatggagactcaactgttTGATATAATGTAGTCCACGCA
AAACTTTTTTCCTCACCTTAACAGTACAATGATAAAGACATGGGTAACAT
TACCTTAGAAGAAGCCATCTTGGAATTGGGCAAACATACTGAAGTATCAG
ACTTACAGGTTCAATACAATCCGCCAGGTAAGTGTAACCATGGTAACCAT
CTCCTGTTTTATAGCtctacaatcggcgccgaaatatattgacaattttg
ggtattttaacgttttttagaatttaaagctcgggcgagaattgcagttt
cagtacttccactttgtttcattgcATTTTTCGATTCGGGAGGGCTGAGT
GGCTCCCGGAGTGGCTTCCAGACTATATTCTCAGctttttggaacatttt
tgagcttttagatcctgagatcacAATGTCTAatattaaaactcagagtt
aaaactctactttccaaccgtactttagagcacttaaaaatcacttgcgg
ttttaaagttttgaggaaatttccattttgtgccaaatatttcggcgccg
attgtagaAGTTGTATTTTGTCGttacataaggcttcgatggacaTAATA
TTAAgaacgaggggtaaatcactaaaaattaggtgtacgagattttgatt
tctttttgatttttgatttctttttgatttctttttgatttttgattttt
ttttgatttctttttgatttttgatttctttttgatttccttttgatttc
tgatttctttttgatttctttttgatttttgatctttttttttgattttt
ttttgatttttgattttttttttgatttttattttgatttctttttgaat
tctttttgatttctgatttctttttgatttctttttgatttttgatttct
ttttgatttctttttgatttttgatttctttttgatttctttttgatttt
tgatttctttttgatttctttttgatttttgatttctttttgatttcttt
ttgatttctgatttctttttgatttctttttgatttctgatttctttttg
atttctttttgatttttgattttttttttgatttttttttcgattttttt
tttatttttgatttctttttgatttctttttgatttctttttgatttctg
atttcattATGATTTctgtttgatttttgatttctttttgatttcttttt
gatttttgatttcttttttatttctttttgatttttgatttctttttgat
ttctttttgatttttcaaaaaggtgtacgtgatttttttcagtgatttac
ccctcgattaagaacaagttgagggCGTTTTAAAGGGTTTATAGATTTCA
Aaatacccgatttcttaagaaatcgcacaaaaatactcccaaaattgtga
aattaagactattttcagaacattttttaggctcaaaactcaaaatgtta
agaacattgaaaggcttcaaaaatttaactggtattataaaaaaagtcgT
GTATTTAATTTGTCTAACTATAATCAAACCAAAGGAAGTCTGTCTGTCTT
TTATACACGATGAGCCGAGGGCTGTCGCCCTCTTAAATTCACAGTTGATA
TTAGTGATTTCCTCACAAGTTTTTAAAGTTGTAccattaaaaaaacaaac
gcCTGACCAGTGAAGCACTAAAACATAATTTGATCGGCTGTATAGTTGTT
ACTATATGAACACTGTCATCCAAGGAAGATTTAAACACCCAGACCACAAA
CCATCCTAATCATTTCACTCTCAATATATAAAGAAGAAACATCCCAAGGA
TCTCCTTGACTATTTAAAATCGTAATCATTCTGCTCTCAAGGGCCATTTT
TTGTTAAATAAGAATAACCTTAAGTAAATAACGATTTTCGTGTGACCATG
TTTTCTCTGTGTCACCttttaaaaacgaaaataaaaatattttcaaaatt
ttttcataaagGAAGTTTTTTTGGAGAAGGAAAAATGAATTTGTCCTGTT
TGGGCTTTTCGCTAAACAATTTACAAAatcgaatttaagaaatattagAA
TTCacaacgtttttttaataaacaatcaaataacttcaaaaaaaaaaaag
aaggctGAAAAAAGTTTCCTGTTATTATTTCCCCGGTAATACAACCAGAA
TCCGGAGAAAATTTCCGTTCAtaagtttttccaaatttctagTCTATAGT
TTTTTTACTGTGCCATACCTAATGCTAAATTTAGTAATAACTGCgttgta
aaaacaaaaaaggaaacaGTGAGGTCACCTCGCCATAGATCACTTTCTAA
ACATtgacgaaagaaaaaaaacctcGTAGAGATGCatacttttttctaaa
atggtCTTTCTCCTTTAATGGCATATTCCCCTCGATGGAAGACTTTCTTA
AATTGTTTAACCAATTGTCAATTTTAAATACTCTCAAATATTTTAAGACC
GGCTCTTGGAGATCTACATTAATCCATTAAATGGCATCTTTATAAGATTG
TCCGATATTTACGGTCCTGTACCGGAAGGTCTAAAACAAttcgaaaaaaa
caacaaatatttCTTCGTTGGCCCTTTACGACATTTTTTAAACCCCTCTA
CATCTTTTTCGAAtacagtttttttttctataagaacaaactgtataaga
acataaggcttcgatagcaaaaatattaagttcggaacattttaaagctt
tttggactctaaaacaccaaattcCTTTAGGTAAATGGACAAAGAGGAAG
TCgctaaatggtgaaaataagaccatttaagaccatttttaggcttaaaa
caaaactcaaaaagttaagaacatccgaaagctacACAAATTCATTCTTC
GCGCCATTGAATACGTAGCATCAAAATTGTTTATAAATGTTTACATAATT
TTAACAGTGTTTTAAGCTGaggttcattttatttttttcctggtCCTCAC
TTGTATATTTCCTTATACCATTTATCATTCAGGATATCGCAAAGCCCAAA
CACAAGCCAACGATTCTTTCTACGTCCGCGCTCAATTCGATCGTTTCCCG
CATGGGAAAGGAGAGCTTAGTTTCAGGAAAGGAGACATCCTTCACGTGAC
CGAAACTTTTTACAAAGGACAGTTGGGTGTCTGGAGAGCTAGTATTGTCA
ATGATAATGAAACGACAAAACCTTCGAGCGGAAAGTTGACGAAAGGAAAA
ATTCCAAGCAAAAGGAAGTAAGGAAGAACCTCTTTTCTTTAAaccctttt
ttctttaaaaggtttaTTTGCTACATAAACATAAAACACTTTTTATTTGA
TAGTtcttaaaggccggtctccacttgcgcgcgctgtgaTTTCACTTTTG
AATGCTACATGCtattgatcaaaagaaaaatgaaacaatttcaTGGGCGC
AATCTGACGTAAcggattgaaaaaattgaaatgtattcaacttttttttt
ccaagcaaaaatgtACCAAAAGGTGAGAACGCAGCACgggcaagtggaga
ccggccttaaaaaaATTACTATGACCGTAGTGCAAAGGTAGAAATTCCGg
gaaatggtacttgatgctcaTTTGCTAAGTACTCAGTAattagatagcta
tcgaaagaggagccttttgATCGCCTGCGACCACGGTCGCGCAGACTTTC
TTACcttattggccttttttatgCTGGCCCTAATAAGCACCGTCTCTTAT
TAAGCCAAAGCTTTTAGCCGGATCCTCATTAATTCCCGATCCCTTACGCC
GACCCTTATTACGCAAACGACGAAAAAATACTGCTAATAAGGGCTGGCAT
AAAAAGGCCGGTATTAAGGTATTTATAAAAATACTACGGTGATTCTTACC
ATTTTTCACATCTCTGTAGAGCGGAACAAGAACTATTACTACGGCGATCC
TCATCTTACGGCGACGACAAATCGAAGAATCGTAAATCGCTATTCCGTCG
CTCCAAGAAAGGTTCTTCGCATCACGCTATCAATCATTCTCGCGAGAGTA
GTGATTCCAaagctgaaatcgaaagtacgGTTAGCGGTGGCACGTCCTTT
GTTTTCATATCAGGTAGGTTATCTAAACTCATTATTATCCTTTTTGAAAC
TGCATACTTTACATCGAGTTTTTCTTTAGGTTTTCATTccttgagtttaa
agcccgaaaagctagagtagaatctctaacctttacAGGCAAAAAAAGAT
GAATGCGCCGCAATTATGACGACGGGTTGTATCTAGCAGTACCTTTGTTT
TTGATGACTGCATTCTTTAAAATCTaccgatagattttactttcaatccg
gtgtttgtgtaaaaaccacgtgTGGGCGTTCTGGATTGGAATtaaatggc
ttcatttccctTCCGGAGTCTaaagtctagcccttcgggctttgaACTCT
ATGTTTTCATTATCTTTATCTGTTATTTAGCACAGTGAACTTTTTGTTTT
GTACTATTATCAAACACTCACCATAGCGACGTTAAGTTTCAATAGAGTAG
AGACGGACGGGTTTCTGCACACTATGGTATATTCCACAGGCTTACCCTCG
CACTGCGCAAATTagtttactcaaaatttatcttcCATTAGGCCCGGCGA
ATGGCGAATTTTGCCTgtccaaggcacgaaaaaattCCAATTCGCCGGTT
TAAAATTTCGGTTCGCTGCCTCAAGTACATATTCACGCCAAACAACACAC
ACTGTGCTTTCTAAGTATTCACCGGCCTCGAATCTAGAGTTCGTCGGAGT
TAATTTTCCATTCATCAGCCTATCAAGAACAAAACAAATCCTTGTAATGA
GGGGGAAAAGTGTATGTTTTTTATACATCAAACTTTATTAGAGAGTGTCT
AGTTATAgagatttttttcttaacctttttcaGANATATTAAGTTcggaa
cattttaaagctttttggactctaaaacaccaaattcCTTTAGGTAAATG
GACAAAGAGGAAGTCgctaaatggtgaaaataagaccatttaagaccatt
tttaggcttaaaacaaaactcaaaaagttaagaacatccgaaagctacAC
AAATTCATTCTTCGCGCCATTGAATACGTAGCATCAAAATTGTTTATAAA
TGTTTACATAATTTTAACAGTGTTTTAAGCTGaggttcattttatttttt
tcctggtCCTCACTTGTATATTTCCTTATACCATTTATCATTCAGGATAT
CGCAAAGCCCAAACACAAGCCAACGATTCTTTCTACGTCCGCGCTCAATT
CGATCGTTTCCCGCATGGGAAAGGAGAGCTTAGTTTCAGGAAAGGAGACA
TCCTTCACGTGACCGAAACTTTTTACAAAGGACAGTTGGGTGTCTGGAGA
GCTAGTATTGTCAATGATAATGAAACGACAAAACCTTCGAGCGGAAAGTT
GACGAAAGGAAAAATTCCAAGCAAAAGGAAGTAAGGAAGAACCTCTTTTC
TTTAAacccttttttctttaaaaggtttaTTTGCTACATAAACATAAAAC
ACTTTTTATTTGATAGTtcttaaaggccggtctccacttgcgcgcgctgt
gaTTTCACTTTTGAATGCTACATGCtattgatcaaaagaaaaatgaaaca
atttcaTGGGCGCAATCTGACGTAAcggattgaaaaaattgaaatgtatt
caactttttttttccaagcaaaaatgtACCAAAAGGTGAGaacgcagcgc
gcgcaagtggagaccggcctttagaaaATTACTGNTAAGTTTCAATAGAG
TAGAGACGGACGGGTTTCTGCACACTATGGTATATTCCACAGGCTTACCC
TCGCACTGCGCAAATTagtttactcaaaatttatcttcCATTAGGCCCGG
CGAATGGCGAATTTTGCCTgtccaaggcacgaaaaaattCCAATTCGCCG
GTTTAAAATTTCGGTTCGCTGCCTCAAGTACATATTCACGCCAAACAACA
CACACTGTGCTTTCTAAGTATTCACCGGCCTCGAATCTAGAGTTCGTCGG
AGTTAATTTTCCATTCATCAGCCTATCAAGAACAAAACAAATCCTTGTAA
TGAGGGGGAAAAGTGTATGTTTTTTATACATCAAACTTTATTAGAGAGTG
TCTAGTTATAgagatttttttcttaacctttttcaGACGACTTCAACACA
TATCAATTCGTCAAACAGTTGGAGTGTAAATTCCCAAGACCAGTTATTAT
CGTTGGTCCAATGGCCGAACCAATCTGTGATAAACTGGTCATCCATTGGA
GTATGAATTTCGCACGCTGCTTTGAAGGTAAgatttatttataatttttt
cgtTATTTCCTTCCTTTACCTACAaccatggtcgaaatatattgagattt
tagggtattttaacgtttttcagaatttaaagttccggcAAGAATTGCTA
TCTTAGCACTTCCATATTttatcattgaatatttcgattttggagggggt
TTTATGGGTTCTAGGCCATATTCCAAGCGTTGTTCAGCTAGGAaagccat
ccaggatcctgccattctatcagctaacaaaaactgaatgacacttgtaa
acttaagttttttactatttcccatcgaaaacaatcaagaacattactac
ttcccaaagccggagaccaaagcaaatgaTCTTCCTTAATGAGGGCGCCC
TTTTGAACTATTGTTAAcacatttaaaatggtggacagagttgcgTAATG
ATATAGGTGTCcgctgcttcgagggtggtaacgccaaaacgcgcAATATG
ATCATTCAACAGAAGGCAAGTTTTTTGCAACGTACGGcatttcacaatta
taagaatatcttatgtgcttaattctatttgactttgagagcttcattga
agatgaagaagtagaaagataAAAANCCTAAAGTTTGTGGAAACTGGGTT
TGAGTTTACCAAAAAGAAAgaagttaaaatttttcaagtcgttgcattga
cattctcataaaactattaattttgacgtcattttccaTCTCTCCTTAAG
ACTGCCCCTGCTGTCTTTCAatgcagttgacgctctcttattcgacgttc
tactattccaCGCGCTCCATTATTCGGTAATATTGAAAATCACTGTCAAC
ATAAAACTCTCAAGAACggcgctcccttattcgatatgtattcccctcta
aaatcgaattAGGGAGCGtctcttattcgacgttctaATATTCCACACGC
TCCATTTTTCGGTAATAGTGAAAATCACTGTCAACAAAAAAACTCTCACG
AACGGCGCTCTACTATTTGGAACGCtcctttattcgatgaaaacTGTATT
CTctgcgaaaatcgaattaggGAGCGTCTCTTATCGACGTTCTTCTATTC
CACGCGCTCCATTTTTCGGTAATATTGAAAATCACTGTCAACATAAAACT
CTCACGAACGGCGctttactattcgatacgctcccttattcgatgaaaat
gtagttcgaattagagagtgtcaactgtattaacttttcctttacTTTTA
ACACCACAGTGGTACACTCTACACAAGACGAGATGTCGGAGAACGTAGAT
AGCGGAACTTATCTGGATTACAAATTACGGAAAGGAGGTGATCGCTATGA
GGTTGTCACTGCAAACGCTGTCAAAGAATTCTCTCAAAAACAGGTATGTC
TCATTGCTCTGTGATTACGTCATTGAGCGAGTGGTAAAAGAAGCATTTTT
ACCtgatattatttgaaaaaaatttNATCCAagacacaaaattttggcgT
CAATCCTTCTttagtagcgagtttatgtatgtgtgtttttcagcgacgga
gacggtaaggttctaatttggctagatcctatccagccgaagacgacggt
aaatcagcacttttaccgtcctcgattttgcggggcggaattgcgggttt
ttccaaatcgctccagtcactctaccgtctcTACCTAAGTGCAAATACAT
ACACTCGGTAGTGTTTAGGGCTGCAACCTAAAGTTTGTGGAAACTGGGTT
TGAGTTTACCAAAAAGAAAgaagttaaaatttttcaagtcgttgcattga
cattctcataaaactattaattttgacgtcattttccaTCTCTCCTTAAG
ACTGCCCCTGCTGTCTTTCAatgcagttgacgctctcttattcgacgttc
tactattccaCGCGCTCCATTATTCGGTAATATTGAAAATCACTGTCAAC
ATAAAACTCTCAAGAACggcgctcccttattcgatatgtattcccctcta
aaatcgaattAGGGAGCGtctcttattcgacgttctaATATTCCACACGC
TCCATTTTTCGGTAATAGTGAAAATCACTGTCAACAAAAAAACTCTCACG
AACGGCGCTCTACTATTTGGAACGCtcctttattcgatgaaaacTGTATT
CTctgcgaaaatcgaattaggGAGCGTCTCTTATCGACGTTCTTCTATTC
CACGCGCTCCATTTTTCGGTAATATTGAAAATCACTGTCAACATAAAACT
CTCACGAACGGCGctttactattcgatacgctcccttattcgatgaaaat
gtagttcgaattagagagtgtcaactgtattaacttttcctttacTTTTA
ACACCACAGTGGTACACTCTACACAAGACGAGATGTCGGAGAACGTAGAT
AGCGGAACTTATCTGGATTACAAATTACGGAAAGGAGGTGATCGCTATGA
GGTTGTCACTGCAAACGCTGTCAAAGAATTCTCTCAAAAACAGGTATGTC
TCATTGCTCTGTGATTACGTCATTGAGCGAGTGGTAAAAGAAGCATTTTT
ACCtgatattatttgaaaaaaatttattttcgagcGCCAAGTCTTTTCTG
ACATAATCATTAACTAACTGGTTAATAGACCTTTTATAGATATTAATATT
CAAACAACTACCATGGTGATTAAGTCCCTTGAGacatgaaataatttttt
tatgattagaaagtagttttgataaaatccgctgggagttaatcaccatg
acaataatttcaaaacgaggcaagtgatgttcgcaacgtaatttatgaaa
aggtctatcggcTATCTacgaactgaacggaacattggaggAAGTGGGGA
TTCGAACCAGGACACCATTGGCCATTCGGCCATCATTATTCATAATTTGC
TCCGAGCactgtcattttcattttctttgactttttttagACGAAACATT
GTTTGTTGGATATCAACATGGACGCCATCGAAAGAATCATTAACGCTCAT
CTATACCCTATcattatttatttaaaattcaaatcTGGTAAAATCATAAA
GTAAGTGTGTTTCCATACTGTACGCCCTGTTTCTCCATACTTAACGCCCC
GTTTCCCTACTGTACGTCTTGTACGTCCATACTGCACGCCCCGTATTTTC
ATATTGTACGCCCCGTATGTCCATACCATACGCCCTGTATCTTCATGNCT
TCATTCCATACGCCCTGTATCTTCATGTTGTACGCCCCGTATTCCATATT
GTACGCCCTGTATCTCCATACTTAATCTATTGGCAGATCATGCATTCTGC
GCACACCACTAAAGGGTTGTCGTGGATGTGACGATCTGACCCGGCTGTTC
ACCCAAAACAATTATCACAGTGTAgccttttgcttgaaaacgaaagcaaa
TCGACGTGCTCAAAAGCTCCTATATATTCGTCCCAAATCTAGATGAAAAC
ATCAAAGCCAACCTGGGCTTATTCTCTTACGAAGCCATGATCCTTAGAGT
AATTGCGTTCCATGTTTTGAGAATCGGAAATTGCTCGGAAATTATTCcaa
aattgaagcttgcaatcTTTGACAGAAAGCCTTAAAAGAGTGtattttac
cccccccccccccaaNNNTAGAGTAATTGCGTTCCATGTTTTGAGAATCG
GAAATTGCTCGGAAATTATTCCAAAATTGAAGCTTACAATCTTTGACAGA
AAGCCTTAAAAGAGTGTATTTTACCCCTCCCCCCCAATATCAATGTTGAA
TAGGAGGCCATCTTGGCCCTGGACAACATTGATACTGGACAACATCGATA
CTGGGCAACATTGATACTGGGGGGAAGGGTTTCCTAGGGtcaaaaactgt
taaaaaacaATTTGTGACAAATATTTTGTCTAAGATTGTACTTATTTAGA
ATCCAATTCTGGTaaagttatgaaaaaacaaCAGCTGTATTCTTGCGTTT
CGTTGGAGTTTTTTTAGCTTACAGGTATTAAATAATTAGATNCTGTATTC
TTGCGTTTTGTTGGAGTTTTTTTAGCTTACAGGTATTAAATAATTAGATC
CGACGGCACTTGTGAATAATTAGATATAATTTTACGGCGTTCTAAGATCA
GGTTATCAAGGGACGCCTCACCTCTTGTATAAACGAAAGCCACTTGATGA
AAACACCGGGTGtgtcacaaaaaagtttctctccttgaaactaattttct
cgaaatctaaaaattttaaaagaaccatgcccattccattggaaagaaga
aagataaacttaaattttgatgggtcatttattgaattcggttcattaga
tcgaaagttgtgctcaatttaataaaaaagttacttttggaaagtgctca
aaaacgttttaaaaatcGACCCCTGGTATCCATTTTACcatttcatgttt
ttctgatacTGTTTTTTTACAGAGATATGAGGGACGGACATTTCATCAAA
GACAAACTATCGACAAAAGAGGCTAAAGATTTGTACGATACTTACctcaa
acaagaaaaagattctaaacattttttcaatGGTAAGTCAATAGTTAATG
GACTAGTTCTCTGTACAATTTTGATCAAAAGTGTCATATTTCTTAGACTG
AAGTcttttataatgcgtgtaatacagtagtatatgcgttatatgataat
acgattattgtcacgggatttagtttgtataaaattgttccctccattac
tttttgctttatttctactatgtctgaattagtcgtctagcttgctagac
ttcATCATATTTCTCAAATGAAAGAATGGGGAGGATTCTCTTGGAGGGCT
AGACATCTATAACCAGCAGCTTATTACATTACCTGCCGATAGACTGTGCC
ACCTAATAATGTCAATTATCgactttaaaaataatttttgtttaccgTGA
AGAAGaatttggtacaaacctaaacgtttttttatgtGGACAAACTTTAT
AAAAACGTAAGGTTTCGAGgcctaaaatattaagaacaagctcaGAACAA
AAGTCTTTACGGACTTTAAAACAcccatttttcagaaaattgcacaaaat
atgaacatttaagtatttttcacatgcacgtaaaattttactttagatat
taagaaaaattgttcgtaaggctgtctttggggaatttccccgacattat
aacactacgtaagcttagggaaattcccaaaCCTTCAAGTTTTTAAGTAA
ATTTTACGTACTTgcgaaaaaagctttaaaactcaaaaacttaaaaacat
ccaaagacttgaaatttcttttggaTATTCTCgttaaaaagaactttttt
tgattCGTTTTATTTAACTTTTCTAGTGACAATCAACGCGGTCAGCAATT
TGCACCAAGTTTGCAAAGATATCAACGATGCTGTTTTGGAACAACAAAAG
AAAGCTTTATGGGTCAACAatgatgaataaaagaaaatcaccGATCTCTA
AAATCTAGGCTGAAAAAATTATCTCCTAATTTGACAAACGGCAAATTGTT
CCCAGGATCATAGATTTCTTAAATTTCTGCtaatcctctagcgaaaagag
tttctgataggaagtatatctctagaggtctgcgattcagataATTAATT
TCGAGAATCAATAGTACAATACAATGAACTTAATTTCTTGATAACAAGCA
ATCTCTATCTATCATAAGTGTTATTCG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_045752	XLOC_045752	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_97	supercontig	scaffold_97:871516..887342 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.719051	1.00239e-09	0.740473	4.84326e-10	5.60914	2.87203	1.47408	4.92035	8.65403e-05	2.93189	1.99575	0.492017	1.26631e-06	1.37957	0.0832351	0.0188332	2.31312	2.01958	1.76313	1.26529	2.46294	0.503376	0.349198	0.499448	0.919966	2.32648	0.994111	0.535883	0.00038892	0.563942

Blast

[Close]

BLAST of TCONS_00073683 vs. Swiss-Prot (Human)
Match: DLG5 (Disks large homolog 5 OS=Homo sapiens GN=DLG5 PE=1 SV=4)

HSP 1 Score: 216.083 bits (549), Expect = 1.640e-59
Identity = 135/389 (34.70%), Postives = 210/389 (53.98%), Query Frame = 1

Query:  196 GDQILKYNDKDMGNITLEEAILELGKHTEVSDLQVQYNPPGYRKAQTQANDSFYVRAQFDRFPHGKGELSFRKGDILHVTETFYKGQLGVWRASIVNDNETTKPSSGKLTKGKIPSKRKAEQELLLRRS-SSYGDDKSKN-------RKSLFRRSKKGSSHHAINHSRESS-DSKAEIESTVSGGTSFVFISDDFN-TYQFVKQLECKFPRPVIIVGPMAEPICDKLVIHWSMNFARC-FEVVHSTQDEMSENVDSGTYLDYKLRKGGDRYEVVTANAVKEFSQKQTKHCLLDINMDAIERIINAHLYPIIIYLKFKSGKIIKDMRDGHFIKDKLSTKEAKDLYDTYLKQEKDSKHFFNVTINAVSNLHQVCKDINDAVLEQQKKALWV 1329
            GD IL+Y   D+ N T+EE  +E+ K  +   L+VQY P  + KA+    DSFY+RA +DR    + ELSF+K DIL+V +T  +G  G W A  +++N      + K+ +G+IPSK   +QE   R S S   DD S         R+S FRR  K        H R  S D K  +        S     D  +  YQ V++++C   RPV+I+GP+ + + + LV      F RC  EV+ ++Q  +   V    ++DYK R G   ++V T  ++KE ++K  +HCLLDI   AIER+ + H+YPI+I++ +KS K IK+ RD  +++DK++ + +K+ ++   K E++   +F   I     L  +C  I   V ++Q K LW+
Sbjct: 1544 GDLILEYGSLDVRNKTVEEVYVEMLKPRDGVRLKVQYRPEEFTKAKGLPGDSFYIRALYDRLADVEQELSFKKDDILYVDDTLPQGTFGSWMAWQLDEN------AQKIQRGQIPSKYVMDQEFSRRLSMSEVKDDNSATKTLSAAARRSFFRRKHK--------HKRSGSKDGKDLLALDAFSSDSIPLFEDSVSLAYQRVQKVDCTALRPVLILGPLLDVVKEMLVNEAPGKFCRCPLEVMKASQQAIERGVKDCLFVDYKRRSG--HFDVTTVASIKEITEK-NRHCLLDIAPHAIERLHHMHIYPIVIFIHYKSAKHIKEQRDPIYLRDKVTQRHSKEQFEAAQKLEQEYSRYFTGVIQG-GALSSICTQILAMVNQEQNKVLWI 1914

The following BLAST results are available for this feature:

BLAST of TCONS_00073683 vs. Swiss-Prot (Human)

BLAST of TCONS_00073683 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1

ZOOM

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POSITION

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Match Name	E-value	Identity	Description
DLG5	1.640e-59	34.70	Disks large homolog 5 OS=Homo sapiens GN=DLG5 PE=1...	[more]

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TCONS_00073683 (transcript) - C. hemisphaerica

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POSITION

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