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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073765 ID=TCONS_00073765|Name=TCONS_00073765|organism=Clytia hemisphaerica|type=transcript|length=1729bp
GATTCAATTTTGAGAGTTTAAACttcgtaagcaaaaaaaaatcgccAAAT
ACTTGGATTTTTAATTATTCACAATTCGCCAAAAACCAGCtttaaatttc
catgaaaaaccatttttttgatCGAAAATATTATTATACTTTCAGTCAAA
ATTcaccaaattcgccaaaattaaatggCTTCGCAAAAGTTAGTTCCCGT
CAAAATAGTCCCCCTGTAGTCCCAACTACTACTAAATGAGATTCCCGAAA
AGCTTTCAATTTTCTAACAAGTCATTCTCATGCCCAGAAAAATCATAACC
ATATTTATAATCCACATTTCTGTTTCATTTTGCCATAAATTTCTCGAACA
TATCCATACAATTTTACATCTGCTTTATTTCTAGTTCTTATAACCTCCAA
CACTGTCGGATCAACCGTAGAATGAgtttttctattctttttcaAAGCAT
ACAGCTCCTTATGTTCTCGTATAAAAAACGACGGtaacctttttttcaaa
attttcaaaaaagtttgaacttctTCTAAAAGCCCTACAGCTGCATAATA
TCGTTTCAAATTCCGTTTAGCTCGTACTAAAGCTGCTCTCGAACCTGTAT
CACAATAAGCAGCTGTCCCACATATGAAATGAGTCATAACATTGTCTTCG
CAGCCTCTATACTGATGACGAACACAGTCTAGTAATGTGATATTCCACTG
GCCTGATCTCTTGAGTTCACGTATCCGACCTTTAGGCCGTAATTTTTCAT
TACGCATATAAAAGTAATGCGATACAACTCTTTCGACTGGTGCGCGAAAA
ATATTAATATACGTAAACGATTTCGATATCTTTAGCTTCCGTCTAAAAAA
GAAATGAGCTATATATGCAAGTCTTTTCGAAATTCGAGCATATTTTTCAA
TATGACCCGGATACGGCCATGGGTCACCGGTTTTGTACCAATCTTCGGTT
GTTCCGGCTTTTACCACGATATCCGTATGGTTTGTGACTTCATCTATGTA
ACCGGAAATACTGGTACTTCCGGTCTTAAAAATCCGATTATAAAGAAGGA
CGTCCGGATATATAGGATCGCAAGATATATTCCCGACAAATCGGATTAAA
CCCGATTTTCCGATACtgttattttttatgatttcttCTAAATTAGAGTT
TGTTTTATTCTGAGATTTTCTTACAATCATTCTGTCTTTCAAATTCATTT
GGGAAGATAACTGTTGTAGAAAATCTTTAGTTCTTTTAGTGGTCAAATAA
TTATCAGTTGTTACACCATGGTTATAATCGGTTCTTCCGATTTCTTTAAA
AGTTGATTTATCGTCGTTGTTGTATTCAAACTTAGTTGGAAAGGTTGGGC
TAAAACTCGTTCTTATTGTACTTCTCGTAAAGGTTAACGTTCTAGTGTAT
TCATCATGAGATGATACATGTTTAGTCGTACCAAACGGCATTGATTTCTT
ATAAATTCGTCTAGTCATTGATTCTTCAGTAATAGTAATAACACTCGGTC
GAGGTGTCCCAAAACTATCAATTTCTCCATTATACGATTGTTGTTTAAAT
ACATTATTTGAAGCACCAGGCAAAGCTGATATGGTCTTGAATGTTGAACG
TGAATTCCATTTTTGGTAGACCAAAACAATGATTGACCCAAAGACAAAaa
acaacaagtttgttttcttgCCCATTCTTCTTCATggtattatttttcat
ttgttattgttgtttttgTAAGATCTAAA Run BLAST on NCBI protein sequence of TCONS_00073765-protein >TCONS_00073765-protein ID=TCONS_00073765-protein|Name=TCONS_00073765-protein|organism=Clytia hemisphaerica|type=polypeptide|length=456bp
MGKKTNLLFFVFGSIIVLVYQKWNSRSTFKTISALPGASNNVFKQQSYNG
EIDSFGTPRPSVITITEESMTRRIYKKSMPFGTTKHVSSHDEYTRTLTFT
RSTIRTSFSPTFPTKFEYNNDDKSTFKEIGRTDYNHGVTTDNYLTTKRTK
DFLQQLSSQMNLKDRMIVRKSQNKTNSNLEEIIKNNSIGKSGLIRFVGNI
SCDPIYPDVLLYNRIFKTGSTSISGYIDEVTNHTDIVVKAGTTEDWYKTG
DPWPYPGHIEKYARISKRLAYIAHFFFRRKLKISKSFTYINIFRAPVERV
VSHYFYMRNEKLRPKGRIRELKRSGQWNITLLDCVRHQYRGCEDNVMTHF
ICGTAAYCDTGSRAALVRAKRNLKRYYAAVGLLEEVQTFLKILKKRLPSF
FIREHKELYALKKNRKTHSTVDPTVLEVIRTRNKADVKLYGYVREIYGKM
KQKCGL Run BLAST on NCBI transcript from alignment at scaffold_97:685025..686753 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073765 ID=TCONS_00073765|Name=TCONS_00073765|organism=Clytia hemisphaerica|type=transcript|length=1729bp|location=Sequence derived from alignment at scaffold_97:685025..686753 (Clytia hemisphaerica)
TTTAGATCTTAcaaaaacaacaataacaaatgaaaaataataccATGAAG
AAGAATGGGcaagaaaacaaacttgttgtttTTTGTCTTTGGGTCAATCA
TTGTTTTGGTCTACCAAAAATGGAATTCACGTTCAACATTCAAGACCATA
TCAGCTTTGCCTGGTGCTTCAAATAATGTATTTAAACAACAATCGTATAA
TGGAGAAATTGATAGTTTTGGGACACCTCGACCGAGTGTTATTACTATTA
CTGAAGAATCAATGACTAGACGAATTTATAAGAAATCAATGCCGTTTGGT
ACGACTAAACATGTATCATCTCATGATGAATACACTAGAACGTTAACCTT
TACGAGAAGTACAATAAGAACGAGTTTTAGCCCAACCTTTCCAACTAAGT
TTGAATACAACAACGACGATAAATCAACTTTTAAAGAAATCGGAAGAACC
GATTATAACCATGGTGTAACAACTGATAATTATTTGACCACTAAAAGAAC
TAAAGATTTTCTACAACAGTTATCTTCCCAAATGAATTTGAAAGACAGAA
TGATTGTAAGAAAATCTCAGAATAAAACAAACTCTAATTTAGaagaaatc
ataaaaaataacaGTATCGGAAAATCGGGTTTAATCCGATTTGTCGGGAA
TATATCTTGCGATCCTATATATCCGGACGTCCTTCTTTATAATCGGATTT
TTAAGACCGGAAGTACCAGTATTTCCGGTTACATAGATGAAGTCACAAAC
CATACGGATATCGTGGTAAAAGCCGGAACAACCGAAGATTGGTACAAAAC
CGGTGACCCATGGCCGTATCCGGGTCATATTGAAAAATATGCTCGAATTT
CGAAAAGACTTGCATATATAGCTCATTTCTTTTTTAGACGGAAGCTAAAG
ATATCGAAATCGTTTACGTATATTAATATTTTTCGCGCACCAGTCGAAAG
AGTTGTATCGCATTACTTTTATATGCGTAATGAAAAATTACGGCCTAAAG
GTCGGATACGTGAACTCAAGAGATCAGGCCAGTGGAATATCACATTACTA
GACTGTGTTCGTCATCAGTATAGAGGCTGCGAAGACAATGTTATGACTCA
TTTCATATGTGGGACAGCTGCTTATTGTGATACAGGTTCGAGAGCAGCTT
TAGTACGAGCTAAACGGAATTTGAAACGATATTATGCAGCTGTAGGGCTT
TTAGAagaagttcaaacttttttgaaaattttgaaaaaaaggttaCCGTC
GTTTTTTATACGAGAACATAAGGAGCTGTATGCTTtgaaaaagaatagaa
aaacTCATTCTACGGTTGATCCGACAGTGTTGGAGGTTATAAGAACTAGA
AATAAAGCAGATGTAAAATTGTATGGATATGTTCGAGAAATTTATGGCAA
AATGAAACAGAAATGTGGATTATAAATATGGTTATGATTTTTCTGGGCAT
GAGAATGACTTGTTAGAAAATTGAAAGCTTTTCGGGAATCTCATTTAGTA
GTAGTTGGGACTACAGGGGGACTATTTTGACGGGAACTAACTTTTGCGAA
GccatttaattttggcgaatttggtgAATTTTGACTGAAAGTATAATAAT
ATTTTCGatcaaaaaaatggtttttcatggaaatttaaaGCTGGTTTTTG
GCGAATTGTGAATAATTAAAAATCCAAGTATTTggcgatttttttttgct
tacgaaGTTTAAACTCTCAAAATTGAATC Coding sequence (CDS) from alignment at scaffold_97:685025..686753 >TCONS_00073765 ID=TCONS_00073765|Name=TCONS_00073765|organism=Clytia hemisphaerica|type=CDS|length=1371bp|location=Sequence derived from alignment at scaffold_97:685025..686753 (Clytia hemisphaerica)
ATGGGcaagaaaacaaacttgttgtttTTTGTCTTTGGGTCAATCATTGT
TTTGGTCTACCAAAAATGGAATTCACGTTCAACATTCAAGACCATATCAG
CTTTGCCTGGTGCTTCAAATAATGTATTTAAACAACAATCGTATAATGGA
GAAATTGATAGTTTTGGGACACCTCGACCGAGTGTTATTACTATTACTGA
AGAATCAATGACTAGACGAATTTATAAGAAATCAATGCCGTTTGGTACGA
CTAAACATGTATCATCTCATGATGAATACACTAGAACGTTAACCTTTACG
AGAAGTACAATAAGAACGAGTTTTAGCCCAACCTTTCCAACTAAGTTTGA
ATACAACAACGACGATAAATCAACTTTTAAAGAAATCGGAAGAACCGATT
ATAACCATGGTGTAACAACTGATAATTATTTGACCACTAAAAGAACTAAA
GATTTTCTACAACAGTTATCTTCCCAAATGAATTTGAAAGACAGAATGAT
TGTAAGAAAATCTCAGAATAAAACAAACTCTAATTTAGaagaaatcataa
aaaataacaGTATCGGAAAATCGGGTTTAATCCGATTTGTCGGGAATATA
TCTTGCGATCCTATATATCCGGACGTCCTTCTTTATAATCGGATTTTTAA
GACCGGAAGTACCAGTATTTCCGGTTACATAGATGAAGTCACAAACCATA
CGGATATCGTGGTAAAAGCCGGAACAACCGAAGATTGGTACAAAACCGGT
GACCCATGGCCGTATCCGGGTCATATTGAAAAATATGCTCGAATTTCGAA
AAGACTTGCATATATAGCTCATTTCTTTTTTAGACGGAAGCTAAAGATAT
CGAAATCGTTTACGTATATTAATATTTTTCGCGCACCAGTCGAAAGAGTT
GTATCGCATTACTTTTATATGCGTAATGAAAAATTACGGCCTAAAGGTCG
GATACGTGAACTCAAGAGATCAGGCCAGTGGAATATCACATTACTAGACT
GTGTTCGTCATCAGTATAGAGGCTGCGAAGACAATGTTATGACTCATTTC
ATATGTGGGACAGCTGCTTATTGTGATACAGGTTCGAGAGCAGCTTTAGT
ACGAGCTAAACGGAATTTGAAACGATATTATGCAGCTGTAGGGCTTTTAG
AagaagttcaaacttttttgaaaattttgaaaaaaaggttaCCGTCGTTT
TTTATACGAGAACATAAGGAGCTGTATGCTTtgaaaaagaatagaaaaac
TCATTCTACGGTTGATCCGACAGTGTTGGAGGTTATAAGAACTAGAAATA
AAGCAGATGTAAAATTGTATGGATATGTTCGAGAAATTTATGGCAAAATG
AAACAGAAATGTGGATTATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073765-exon-scaffold_97-1491911889:685025..686753 | TCONS_00073765-exon-scaffold_97-1491911889:685025..686753 | Clytia hemisphaerica | exon |
| TCONS_00073765-exon-scaffold_97-1510915933:685025..686753 | TCONS_00073765-exon-scaffold_97-1510915933:685025..686753 | Clytia hemisphaerica | exon |
| TCONS_00073765-exon-scaffold_97-1575043694:685025..686753 | TCONS_00073765-exon-scaffold_97-1575043694:685025..686753 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_97 | supercontig | scaffold_97:685025..686753 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008146 | sulfotransferase activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0008146 |
sulfotransferase activity |
Blast
The following BLAST results are available for this feature:
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