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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073697 ID=TCONS_00073697|Name=TCONS_00073697|organism=Clytia hemisphaerica|type=transcript|length=995bp GGACCCCTGTAAATGGtgcgggatcaaaaaattttaaaaataggggggat acctttatagggggggatgaaatattaatgggggggttcagacccTTCTG CACACtatgaaattttacaaataCAACTTTTAGACCCAAacaaatttaat gatttttctgaaacaaataaaacattGCTTCTTTTTTCAACTTAAACAAC CGCCTCGCTTTAGGTTTGTTCATACTTTCATCAACCATTTCTCTTGTAAT CTTCTCACCATCCAGAGTCCTAAAGTGCTGGTCCAAATCATACTGGTCAT TAAGAAGTTCTTTCTTTCCTGAATCCCATACATATTTGAGTGTATATTCC TTATCAAGGGATAACATTCTAGCATCATAATGGGCATCCGAGATTAAAAA GTACCCTCCTTTCTTCAAATATTTGGAGGTTGATGTTGATACAATACCAG CACAGGCAGAtatcaataaatcaaaactttcctCCACAACTCCTTGTAAA TTATGTGTAAAATCACCACAAATGAATTTCAGTTTACAGTCATTGTCATA TTCCTTGTTATCATTAAGCCATTGTAAAGTAGAATcatcttcaaaacaat tttgtacTTTAGAATCAAAATCAACATAAATTACATCTTTGAAAGTAAGT GATGCAGTGATATGACGATGGCATCCTGGGTAAAATACCTTTTCTGGTTG GACCAGTTTTTGTACGGCAAGAAATAATGTTATATGCATTTCATCTCCAT TTTTGTAGCTTTTCAAATAGGCTGACAAAGCAGTTGAACCTTTTTTTGGC CTCTTGACAGACACTGAGATTGGTTTTGGAGGTTTAACTGTTTTCCTTTT TGAACTTCTTGTTTCCATTTTAGATTATTACAGCTACGCGTTTATGATAA TAACAAttgtataaaaatatttcataaatttgGTCCAATCCTGAGAACAA TCTAACAAGAGTGGGATTTCGAAAATGACCTTATCATACGAAAAT Run BLAST on NCBI transcript from alignment at scaffold_97:122708..123767- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073697 ID=TCONS_00073697|Name=TCONS_00073697|organism=Clytia hemisphaerica|type=transcript|length=1060bp|location=Sequence derived from alignment at scaffold_97:122708..123767- (Clytia hemisphaerica) GGACCCCTGTAAATGGTGCGGGATCAAAAAATTTTAAAAATAGGGGGGAT
ACCTTTATAGGGGGGGATGAAATATTAATGGGGGGGTTCAGACCCTTCTG
CACACTATGAAATTTTACAAATACAACTTTTAGACCCAAACAAATTTAAT
GATTTTTCTGAAACAAATAAAACATTGCTTCTTTTTTCAACTTAAACAAC
CGCCTCGCTTTAGGTTTGTTCATACTTTCATCAACCATTTCTCTTGTAAT
CTTCTCACCATCCAGAGTCCTAAAGTGCTGGTCCAAATCATACTGGTCAT
TAAGAAGTTCTTTCTTTCCTGAATCCCATACATATTTGAGTGTATATTCC
TTATCAAGGGATAACATTCTAGCATCATAATGGGCATCCGAGATTAAAAA
GTACCCTCCTTTCTTCAAATATTTGGAGGTTGATGTTGATACAATACCAG
CACAGGCAGATATCAATAAATCAAAACTTTCCTCAACAACCNGGTTGATG
TTGATACAATACCAGCACAGGCAGATATCAATAAATCAAAACTTTCCTCC
ACAACTCCTTGTAAATTATGTGTAAAATCACCACAAATGAATTTCAGTTT
ACAGTCATTGTCATATTCCTTGTTATCATTAAGCCATTGTAAAGTAGAAT
CATCTTCAAAACAATTTTGTACTTTAGAATCAAAATCAACATAAATTACA
TCTTTGAAAGTAAGTGATGCAGTGATATGACGATGGCATCCTGGGTAAAA
TACCTTTTCTGGTTGGACCAGTTTTTGTACGGCAAGAAATAATGTTATAT
GCATTTCATCTCCATTTTTGTAGCTTTTCAAATAGGCTGACAAAGCAGTT
GAACCTTTTTTTGGCCTCTTGACAGACACTGAGATTGGTTTTGGAGGTTT
AACTGTTTTCCTTTTTGAACTTCTTGTTTCCATTTTAGATTATTACAGCT
ACGCGTTTATGATAATAACAATTGTATAAAAATATTTCATAAATTTGGTC
CAATCCTGAGAACAATCTAACAAGAGTGGGATTTCGAAAATGACCTTATC
ATACGAAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00073697-exon-scaffold_97-1575043694:123313..123767 | TCONS_00073697-exon-scaffold_97-1575043694:123313..123767 | Clytia hemisphaerica | exon |
TCONS_00073697-exon-scaffold_97-1575043694:122708..123247 | TCONS_00073697-exon-scaffold_97-1575043694:122708..123247 | Clytia hemisphaerica | exon |
TCONS_00073697-exon-scaffold_97-1510915933:123313..123767 | TCONS_00073697-exon-scaffold_97-1510915933:123313..123767 | Clytia hemisphaerica | exon |
TCONS_00073697-exon-scaffold_97-1510915933:122708..123247 | TCONS_00073697-exon-scaffold_97-1510915933:122708..123247 | Clytia hemisphaerica | exon |
TCONS_00073697-exon-scaffold_97-1491911889:123313..123767 | TCONS_00073697-exon-scaffold_97-1491911889:123313..123767 | Clytia hemisphaerica | exon |
TCONS_00073697-exon-scaffold_97-1491911889:122708..123247 | TCONS_00073697-exon-scaffold_97-1491911889:122708..123247 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_97 | supercontig | scaffold_97:122708..123767 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
Term | Definition |
IPR029063 | SAM-dependent_MTases |
Blast
The following BLAST results are available for this feature:
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