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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073604 ID=TCONS_00073604|Name=TCONS_00073604|organism=Clytia hemisphaerica|type=transcript|length=1158bp
TTGCTCCTTCAATATCTCATCCACTGGTACAAGATCAGAAATGAATGTTT
CATGATGTCATGATTTAATTTGTTTGTAGTAGAGTTTTGTGGATTCGTGC
AACACATATGCAAAAAGGGAATTACTTTGTCGTATGCAGCTGGCTGATAT
GATAAATGATATTGACTCGTAGAGTGTAAATATAGCGTACTTTAATTACC
TAAAATAATCTAAAAGTTCCCTATACGAAAATTGGAATTTCCGAATACTA
ATTTGAGAGACGAACCAAGGTGGTCGGCTAAACAAGACTCTGCGagaaat
atttagtggataaAGCGCCAGcttggtttttttcttttttcaaaatggct
gtTCTGCAGTACTatacgaatttttttcatcttggCGCGCTTGATTGTTT
AGGGAATATTTGGATCGCTTTAGACAAGTACGATACCTTCACGTCAATTA
TTAACGAGTTCATGTATTCCATATAAATCGAAGGAGGCGGTATAAAACAA
AGTTGACATGTCAAAaaaatcgccgtccactttgctcgacgacggtaaaa
acaccaaaataccgccgtctgtttaggtgagcaaaggcgatacaGCCGCA
CATCaaatatcgactttgttttgcgtcgacttcacttaccgtcgccctcg
atatcttCCGATACATCAACTCGTTATTGTCCACTTAAAGATACATTCAT
CAttctaccttatcggggaaaacttcgtcgggaaaaagtgacgaaatttc
ggccaagtgatgaatatttttccccgacgaaaattttccccggccttaat
gcgtttaccataaccagcaagtgacgaatatttttccccgacgaagtttt
ccccgataaggtatctttTTTACGGACTACCTCTGTTTAAAACCTTAATA
TAAACAAAATGTTAACGTGATGCTTCTTATAAAGTTATTTATTTCTTAga
gtttttaagaacattttttataataatTGTCTACAGATATACGGGCGTAA
CGgctaaatttttctttaatgcCGGTCAAGAAATTTCCGATGAGTTAAGT
ACCGGAATATCTTAAATTCAACCTTTCGAAACCCAAATACCAGTCATTTA
TCGATTAAAGTTTGAAAGTAGAATTTGTCAATAATTTTAAATCTAGGgaa
tttttaaa Run BLAST on NCBI transcript from alignment at scaffold_95:113799..114956 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073604 ID=TCONS_00073604|Name=TCONS_00073604|organism=Clytia hemisphaerica|type=transcript|length=1158bp|location=Sequence derived from alignment at scaffold_95:113799..114956 (Clytia hemisphaerica)
tttaaaaattcCCTAGATTTAAAATTATTGACAAATTCTACTTTCAAACT
TTAATCGATAAATGACTGGTATTTGGGTTTCGAAAGGTTGAATTTAAGAT
ATTCCGGTACTTAACTCATCGGAAATTTCTTGACCGgcattaaagaaaaa
tttagcCGTTACGCCCGTATATCTGTAGACAattattataaaaaatgttc
ttaaaaactcTAAGAAATAAATAACTTTATAAGAAGCATCACGTTAACAT
TTTGTTTATATTAAGGTTTTAAACAGAGGTAGTCCGTAAAaaagatacct
tatcggggaaaacttcgtcggggaaaaatattcgtcacttgctggttatg
gtaaacgcattaaggccggggaaaattttcgtcggggaaaaatattcatc
acttggccgaaatttcgtcactttttcccgacgaagttttccccgataag
gtagaaTGATGAATGTATCTTTAAGTGGACAATAACGAGTTGATGTATCG
Gaagatatcgagggcgacggtaagtgaagtcgacgcaaaacaaagtcgat
atttGATGTGCGGCtgtatcgcctttgctcacctaaacagacggcggtat
tttggtgtttttaccgtcgtcgagcaaagtggacggcgattttTTTGACA
TGTCAACTTTGTTTTATACCGCCTCCTTCGATTTATATGGAATACATGAA
CTCGTTAATAATTGACGTGAAGGTATCGTACTTGTCTAAAGCGATCCAAA
TATTCCCTAAACAATCAAGCGCGccaagatgaaaaaaattcgtatAGTAC
TGCAGAacagccattttgaaaaaagaaaaaaaccaagCTGGCGCTttatc
cactaaatatttctCGCAGAGTCTTGTTTAGCCGACCACCTTGGTTCGTC
TCTCAAATTAGTATTCGGAAATTCCAATTTTCGTATAGGGAACTTTTAGA
TTATTTTAGGTAATTAAAGTACGCTATATTTACACTCTACGAGTCAATAT
CATTTATCATATCAGCCAGCTGCATACGACAAAGTAATTCCCTTTTTGCA
TATGTGTTGCACGAATCCACAAAACTCTACTACAAACAAATTAAATCATG
ACATCATGAAACATTCATTTCTGATCTTGTACCAGTGGATGAGATATTGA
AGGAGCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073604-exon-scaffold_95-1491911889:113799..114956 | TCONS_00073604-exon-scaffold_95-1491911889:113799..114956 | Clytia hemisphaerica | exon |
| TCONS_00073604-exon-scaffold_95-1510915933:113799..114956 | TCONS_00073604-exon-scaffold_95-1510915933:113799..114956 | Clytia hemisphaerica | exon |
| TCONS_00073604-exon-scaffold_95-1575043694:113799..114956 | TCONS_00073604-exon-scaffold_95-1575043694:113799..114956 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_95 | supercontig | scaffold_95:113799..114956 . |
Blast
The following BLAST results are available for this feature:
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