|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073438 ID=TCONS_00073438|Name=TCONS_00073438|organism=Clytia hemisphaerica|type=transcript|length=805bp
NATTGAtttgaataaataattattGAACTTGTGCTGCTGAACCTGAACTT
ATTGGACACTGATTTATGGATTTGATTGGAAATTTAATGAAACATTTATT
GATTGAACTTATGCTGTTGAACTTGGAACTCACACGGATACGATTTATGG
ATttacatttgatttgaaaacttttgagaaTTAGAATTTATCGAAAATTG
GAGAACTTTGGATACGAATTTACGAATAATTCCTATCTGTCATTGGGGGA
ATATATCGTCACACATTGATTTGAGATTTGAATTGAAAACCTTATAGATT
GTATCGAAAATTGGAAGCTTTGGATACAAATTTACGAATAATTCCTATCC
GTCATTGGGGGATATATCGTCATACAACTTGATTTGAGATTTGAGGATAC
ACATTTACGAATAATTCCTATCCGTCATTGGGGGGATATATCGTCACACA
TTTGATTTGAGATTTGAGGATACAAATTTACGAATAATTCCTATCCGTCA
TTGGGGGGATATATCGTCACACATTTGATTTGAGATTTGAGGATACAAAT
TTACGAATAATTCCTATCCGTCATTGGGGGATATATCGTCATACAATTTG
ATTTGAGATTTGAGGATACACATTTACGAATAATTCCTATCCGTCATTGG
GGGGATATATCGTCACACATTTGATTTGAGAATTTGATCTTTACACATTT
GATTTTAGGATTTGAGAACTTTGGAGTACATTGTTACACATGATTTGGAT
ACTTCAGACTTGATTGAGAATTTGAGATTTACGACTTTTAACGAACGGGA
ACAAA Run BLAST on NCBI transcript from alignment at scaffold_92:54886..55809+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073438 ID=TCONS_00073438|Name=TCONS_00073438|organism=Clytia hemisphaerica|type=transcript|length=924bp|location=Sequence derived from alignment at scaffold_92:54886..55809+ (Clytia hemisphaerica)
NATTGAtttgaataaataattattGAACTTGTGCTGCTGAACCTGAACTT
ATTGGACACTGATTTATGGATTTGATTGGAAATTTAATGAAACATTTATT
GATTGAACTTATGCTGTTGAACTTGGAACTCACACGGATACGATTTATGG
ATttacatttgatttgaaaacttttgagaaTTAGAATTTATCGAAAATTG
GAGAACTTTGGATACGAATTTACGAATAATTCCTATCTGTCATTGGGGGA
ATATATCGTCACACATTGATTTgagatttgaatttgaaaacttttgacat
TTAGATTGTATCGAAAATTGGAGAAGTTTGGATACAAATTCACGAATAAT
TCCTATCCGTCATTGGGGAATATATCGTCACACATTGATTTGAGATTTGA
ATTGAAAACCTTATAGATTGTATCGAAAATTGGAAGCTTTGGATACAAAT
TTACGAATAATTCCTATCCGTCATTGGGGGATATATCGTCATACAACTTG
ATTTGAGATTTGAGGATACACATTTACGAATAATTCCTATCCGTCATTGG
GGGGATATATCGTCACACATTTGATTTGAGATTTGAGGATACAAATTTAC
GAATAATTCCTATCCGTCATTGGGGGGATATATCGTCACACATTTGATTT
GAGATTTGAGGATACAAATTTACGAATAATTCCTATCCGTCATTGGGGGA
TATATCGTCATACAATTTGATTTGAGATTTGAGGATACACATTTACGAAT
AATTCCTATCCGTCATTGGGGGGATATATCGTCACACATTTGATTTGAGA
ATTTGATCTTTACACATTTGATTTTAGGATTTGAGAACTTTGGAGTACAT
TGTTACACATGATTTGGATACTTCAGACTTGATTGAGAATTTGAGATTTA
CGACTTTTAACGAACGGGAACAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073438-exon-scaffold_92-1491911889:54886..55149 | TCONS_00073438-exon-scaffold_92-1491911889:54886..55149 | Clytia hemisphaerica | exon |
| TCONS_00073438-exon-scaffold_92-1510915933:54886..55149 | TCONS_00073438-exon-scaffold_92-1510915933:54886..55149 | Clytia hemisphaerica | exon |
| TCONS_00073438-exon-scaffold_92-1575043694:54886..55149 | TCONS_00073438-exon-scaffold_92-1575043694:54886..55149 | Clytia hemisphaerica | exon |
| TCONS_00073438-exon-scaffold_92-1491911889:55269..55809 | TCONS_00073438-exon-scaffold_92-1491911889:55269..55809 | Clytia hemisphaerica | exon |
| TCONS_00073438-exon-scaffold_92-1510915933:55269..55809 | TCONS_00073438-exon-scaffold_92-1510915933:55269..55809 | Clytia hemisphaerica | exon |
| TCONS_00073438-exon-scaffold_92-1575043694:55269..55809 | TCONS_00073438-exon-scaffold_92-1575043694:55269..55809 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_92 | supercontig | scaffold_92:54886..55809 + |
Blast
The following BLAST results are available for this feature:
|
