TCONS_00073271 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073271
Unique NameTCONS_00073271
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1840

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073271 ID=TCONS_00073271|Name=TCONS_00073271|organism=Clytia hemisphaerica|type=transcript|length=1840bp
TGACAGTTGAGCACTATCTTTTGATCGAGCTCCGATGTAGATCGAGTCAC
GATCGCCGTCGACCAAGCAAGGATGTAAACATTCTAGCCTCTCTGCGGAC
ACTTAAATGCCCACTATGTCTGATAGATAGATTCTGATAGAGTTCCAAAC
TGATTGTGAAGACGAGTGAGAAAACGAAAAAACTAAAAGTTTTGTTCATC
TGTTCATtatatATAATGTCGAATGGTCAGGAGGAAAGGGATGGAAATGA
TAATTCATGTACACCAAACATAAGATTTATTTGTTCTTTTGAAGGCGTAC
TAAAGATCATAGAATTTGGAtccattatttttgtaaaaaaccctgaagta
tttttatttattttcttcgtACTGTTCACTGTTCTAATCGCATGGATTAT
TTGTGCTGCTGCATTTGACAACATACAAGGTGGTTACGTCATAAACGTCA
AACCGAGATACATCATTTTTCTCATTATCGGTATCTTTTGCTGGATATGg
gtcatttttgtcattttgtttaATATTTTGGGATGTTTCAATAAATGCAT
TTTCAATCGACTCACAAGATTGTTTGGTTGGCACATCTTTTTATTGGCGT
ATTCACTTAGTTGGTTGTTCTTTTGGATGTTTGGATCCATCTTGTTAGCT
TGGCATCACAAATTCTGGAGTGGAAATATCGCAGCATCCATTTTTGGATT
CGTCAActccattttatttttcatcgaTTCAATCATGTATTATCGAAGAT
GTCGAAAATATCGAGTTCAAATTCGAAAAATCCGTCGAGGTTTGATTGAG
AATGAGGAagaggaaatttgaaaaatctaaagATGTATTGATTGCATTTG
TTTCAATATTTACGGAGCTGGTACAAATGGCAATAGCTTTTCCTGTAATG
GAGACAGTTAGTTTATGATTTATCTAGATCCTGACTGATTGTAGATgaca
atagatcttatcggagtttttgatttcttctaaaaaagcgatgcatcgtg
ggattgtttcgggagtattgcAATAGAactccctcgaggaattcctaaga
gctttctattgtaataccatcgaaacaatcccacaatgcatcgctttttt
agaaaaatgaaaaactccgataagatctattaatCAGCACTCTTACCGTT
TTTCAGTTAAAACTTCGAGCTGTTCAACACCGCAAACCTCAAAAGGGTAG
ATACATAACATAAACTCGCTTACCCGTGCAACTGAGAAAGAGTTTAATTA
TCAACTTGTCCTTCCTTTATTAGCCCTGAATTACGCCTTTCCCGAGTCTA
TTATTATAGGGAATATTCCAAACATTAAAGGATGGGATCGTCCCTGATCT
ATTGACGGTAGGTGCAATATGGACAGAAAATAGACTTTAATTTACGGTGC
ATTTTCATAATATTTATCAGAAATTTGTCAGATTTTGCAACAAAAGAATT
CTCACTTATACTACGcctttacagtgcactttctTTCTAACGATCGTTAA
ATTGCACTTTGAGGAGCCTAAAAATGTACCCATAAAGCATTCCCTACTTT
TGAGTGCTCATCCGGGTCAATTACTCTGGAGTTATTACATCGATTGTTat
taattttagtatttttatcactttttgtaGGAAATAATATTTAAATTATA
TGTATACTGTATGTTGTAGttttttgtatacttttttgcaCAATTTTAAT
ACCTTTTTGTTTTTACGTAATTTTTGTTACCACCGTGTATGATATTTAGA
GTTTTCATGCTTAGATATTTAGTAtaatatttaactttttctgTAGATAT
AATATAACAAATTaccaaatatgaaaaattcaaatttctc
Run BLAST on NCBI

protein sequence of TCONS_00073271-protein

>TCONS_00073271-protein ID=TCONS_00073271-protein|Name=TCONS_00073271-protein|organism=Clytia hemisphaerica|type=polypeptide|length=201bp
MSNGQEERDGNDNSCTPNIRFICSFEGVLKIIEFGSIIFVKNPEVFLFIF
FVLFTVLIAWIICAAAFDNIQGGYVINVKPRYIIFLIIGIFCWIWVIFVI
LFNILGCFNKCIFNRLTRLFGWHIFLLAYSLSWLFFWMFGSILLAWHHKF
WSGNIAASIFGFVNSILFFIDSIMYYRRCRKYRVQIRKIRRGLIENEEEE
I
Run BLAST on NCBI

transcript from alignment at scaffold_89:217612..226351-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073271 ID=TCONS_00073271|Name=TCONS_00073271|organism=Clytia hemisphaerica|type=transcript|length=8740bp|location=Sequence derived from alignment at scaffold_89:217612..226351- (Clytia hemisphaerica)
TGACAGTTGAGCACTATCTTTTGATCGAGCTCCGATGTAGATCGAGTCAC
GATCGCCGTCGACCAAGCAAGGATGTAAACATTCTAGCCTCTCTGCGGAC
ACTTAAATGCCCACTATGTCTGATAGATAGATTCTGATAGAGTTCCAAAC
TGATTGTGAAGACGAGTGAGAAAACGAAAAAACTAAAAGTTTTGTTCATC
TGTTCATTATATGTAAGTATTTTTTGACTTTTCTATGACTTTTTACAGGG
CAATCCTTTTCAACCTTCGATCAGTGATCTATCAACTTGATGAGGTTGAA
CTTAAAGCCTGAGGAATTAGCTAGAGAGTGGAATCTTCAATATTTCCTAC
AGTAGATAGAGCAAGAATTATATACGCAAGAATAGCTAGTCTTTTCTGGG
AGATCGCCACAGTCTTTTGAACATACATACATTTTTAAACCAATTTCATT
TATCTTATTTTTGTTAATGCTTTTATATGTCTGTATGTAGGGAGAACAAA
CATTTATGTTGTTAACTACTGAAATATATAGATAGATACATTGGGTTAGC
CGAACCTAAGTTCAAGAAACGATACGCTAACCACAAGTCATCCTTCGCCA
ACGAAAAGTACGAAAAAGAAACTGAACTTTCCAAGGAGATTTGGAGGTTG
AAACGAAAGAATCGTGCCCCAAAGATTACTTGGAAGACAGTCCGTAAATG
TCCACCGTTCAATCGTGCTTCGCTGGAATGTTCACTCTGCCTTAGCGAAA
AATTAGAAATTGCCACATTCGACCAACCTGAGAAACTGTTAAATTCAAGG
AATGAACTGATCTCGAAATGTCGGCATGTGAATAAGTTCACCCTCAAACT
CCACGACACCAAAGACTGAAATGACGTNATGTAACTGAAAAATCAAAATC
TAAGTTCACTAAATCAAAAGTGAATTCCACTACAACTCCCCTAGGCAATA
AAATCTATTAAATCTTTATTGTAAGAGTTCTACTTTTATATTCATCTTTG
GTTTTCAGTTTTGGTTTTACTTTATTAATCCACAGTGCCTCAAGGGACAT
TAAGCATTGTTCAGATTTAATTGTGCGATCTAGAATCATTACATTTTCCA
TCAAAATTTCACAATTACAATTTTGAAAATGTCTTCCCACTGGAGTGTTT
ACGTTGCGGTGCTCTTTGATCCTGGTAATTAAGTGCCTGGCAGTCTGCCC
GACATAGCTCGATTCACACCGAGAACATTTAATAAACAAACCGCGTCATA
AAGTTGATTTGTTTTTTTCAACACATCGAATCTCCAATATTTTAATATCA
CCACAATTTTCCATATTTGATTGATATTCGATTGTGTTTGATTGAGGTTT
GCTTTTGTTTGATTGTCATTCTATCAGATTGTGGAAGTACTTTGATTTGT
GAAGTATCTTTACGTCACATAGAACAAAAGAAAATAGCAAAAGAACAAAG
GAATTACCAATAGCTACCATTATTTCGGAACCATGATATGGGGAATCGCG
ATTTTATGGAAATGGAAATCCTCATATCAAATAAAGCATCTTCTAAAAAA
TTTCATTCTTTCCCATAAATGGGAAAATGAAAAACAAAGAAACTTTGAGC
CTTTAAGACCAGGGGATGTCAATGGAACTGTTTGATTACCAAACTAATCA
AACTTAATCAAATTTAACAGTTGTTTTGGAGAACGCAACGTCCTATTATT
GAATAACAAATTACTTCACATACCTTAAAAGAAGAAATTTTGGCGGGAAT
TTAATTTGGCGGATGGCCAAAAAAGTTTTTTCAGAGGGAATTTAATTTGG
CGGATGGACGAAAAATCTAAATTTAGCGGGAATTTAATTTGGCGGTCGCT
TAAAAATTTAACCTTAAGATGGCGTCAAAACAGCAAAAAAATAGCGAAAA
CACCTTAAAAGAGATCATATTTTCAAAATGTTTAATTTGGCGGGAATTTA
ATTTGGCGGTTGGTGGAAAAAAGAAATTTTGGCAGGAACTTAATTTGGCA
GATTTCAGTCAAATCTGCCAAATCCGCCAAATTTTCTTTCAGCCAAAATT
TCTTCCTTTAAGGTACATAACTTTCCCTCAGCCAATAAAAATATGATAAA
TTATCTTGTCTTTAGGTAACTATTGTGGAGTAATTAGTTATTCAATAGGT
CATCGCGTTCTCCAAACAACTATCCAACAATAGGTGTTCAGTTACCAAAC
CAACTACTAGAACAGTAATCAAACCAAGAAATTTCGGTAAAGTTCAATGA
CTTGTTCGATTGATCTGTTAATTAAAGTTTGATAACTATTCGATTATAGT
TTGATAGGTCCGATTGTAATTTGATAGGTTTGATCATAGTTAGACATTCA
TTCAATAATAGGCAATTTTCGCAATATATTTGCTACTCTAGTATATAATA
CCTGAGAATAGCAGAATGATTACGGAAAAGAACCAAGATACTACTCGAAC
ACTCGTCGAACAACTCGAACATACACCGAACAACATCGAACTGTATTTTT
AATCTAACTAATCAATATATTTCCACGGTAAAGCTCTATTACTGTTCGAT
TTAGTTTGGTAATCAAATGTCCTATCCTTCAAATAAGTTCGATTGAGTTT
GATGGTTCGATTAATAAAATTGGTTCGATTGGGTTCGGTTGACATCCCCT
GGATAAAAAGAAGTTATAGTCTAAAAACCTGTAGTATTATCATGTATTGG
GATGTCCCAAAAAAACCATTACCCCCTGTGGACGACACCGTTTTTTGGAA
TTTTTTTTCACTTGGAAATCCTGAGAAATTTTGAAAAAGGTTCCAGAAAA
TGCAAGATTTTCCTAATTATTTGGTCATCCCTATCAGAAAATCTAAGATT
TTTCCTTAAAAATTCTTGAATGTTACAGAAATCCTGAAGTTTTTTAAAAG
TAAATTGTTTGAAATTGAAATCCATTTCCTCCACAGGGGGTAACAGATTA
TAACTGGAACCGCCCAATAAACATTATAATATTACACCATAAATCTAGAA
ATTTTAATATTTCTGAAATTTATTTTTCTTCAAAAAATTAAAACATTACA
GAATGTTTCACGCCAAATACGATCATCAGATGTATGAATAAAAAATTTGA
ACAAATTCTACTATGTAAAACATATTAGAAAGTAATTAACAGGCTATAAA
AGTCATTAAAAGTAATAAAATTTGAGTTGATTGGCTAAAGAAATATGAAT
GGTAAAAATTGTGTCTAGAGAAATAAAATGTATTGATAAGTGCATTGTAA
TTTAAATGTTAAAATTATCACACATCTGGGGGGGACTGTTTTGTAATTTT
TCAATATAGGAATTTATTTACGTGTTGGCATTTTGAAATCAATTCCGATT
TTGTGTTAACGAGCTCACGTTTAGAGGTGATTTATTTATTTAGCTCTACC
TTGGTATAGAGCACTTTGTCACCACAAACTACTGAAATTGTTGTTGAAAT
TTGAATATCTTGTAAAGTACAAAAGTTGTATCAATGTCAAATTTTGACCA
TAGATAGATATTAATGTAAAAAGAACTTTCCTTTCAAAATTTTTGAAATT
TTTTATAGCCAAAAATTGAACATGGCTAAAATATGATGTCATCATTAAAA
AAAAAAGAATTACAATTTATAGCGTCAAAATTTCATATTGAAATCACAAA
TAGTTTTAAGTTTGACGTAATGTTAGGTAGTAATCTTTATGATGTCGTAA
TATGTCACAATACAGGTTTTTGGGCTATAACTTCTTGTAGGCTAAAAATC
AATTTTTCTAACAGCTATGGAGAACATTATACTTCTTTCCAGCCGTGACA
TCATAATAACTTGGTCTTTTTTCAATAAATGCTTTAAAGGGGACGTCTGG
TCTGATTTTAGGTATTGTTTTTTTAGAATTTTTGGAAAAATTATTCCAGG
GAGATTAAAATGAGCTATCTCACTTCAAGAGATTTTTTTTCTATCACTTT
CTATGGCCATTTAAAAAATCCCTCTTTTTCAAAATTTATGACGTAGCTTA
TGTTATATGTTTTCTATGTTCTTTCAAGTAAACGAGATTAACTCCTCTTT
CTGTGCAGCTGGCATTTTTATAAGAAAATTTTAAGTAAGTCAGAGATGTG
CAAGATCATTTAAAGTCGTTAAAACATCTTTTTCCCAACATTTTGTCAAT
GAAAGCTTACTCCAACATCTTCATAGAAAACTGAAATATTTATATTGTTG
TGGACTGGAAAAATCATCGAAATTAGAAGTTTGAATTAAAATGTTCTTAT
CAAAAGTTGTTTAAATACAGTAATTTAGACTACAGACAAGATTTCTGTTC
TTATAAATTACGAACAAAGGTTACGTCAAAAATCAGGTAAAAGAGAGGAA
ATTGTAAAACACTAAAATCTGAATATGTCAGTCAAAACTAAAGATTTTGA
GTTCGTTTTTTCTGCAAAATTTTTTTTACTAATTTAGCTGTCTGGCATAG
AATTATGACTGAAATGATCTACCAAAGCAGACGTCCCCTTTAACACTGTT
CGTACTAGGGGGTTTCTGTTTGGAAGGGAAACTTTTATGCTAATAGCTCC
TGAAATGATAAAGCTTTGGACATGAAATTTTTACATAAGAATTTTCACAC
CTTGATATGATGATATTGCTGACATTATGTGTCATAGAAATTGATACAGG
TCTAATACAAAATAATTTTTATGTTAAATGTACATATTTATGTTCAAAAC
CATTATTTATTGAATATTTAGGATAAAATAAGGCTTTTGTACTGGGGAAC
CCTTTTCTACAGTAAGGCCTTTGTTTGTTCACACTCTGGAATATAACTAT
GATTTTTTCGGTTTTTTAGATAATGTCGAATGGTCAGGAGGAAAGGGATG
GAAATGATAATTCATGTACACCAAACATAAGATTTATTTGTTCTTTTGAA
GGCGTACTAAAGATCATAGAATTTGTAAGTGTTTAGAATTTTCAGCAGAG
CTTACTCTATCATAAACTAATGAAATGAAAAAAGTCAAACAGGGCCGCCT
ATAAAAACTGTGGAAAAGTTTTTGTAGATTAAGTGCCAGTTTGGTTTTCT
CTTATTTCAAATAGTGGCTGTTCCTCAACATTATCCAAACCTTTGTCATT
GTGGTGCGTTTGAATGTTTAGGTCAATATACAATAGAGGGGTAAATTGTG
TCTCATCACTATTCTTATTCCATCAAATAGAGGGTTAAAATATTATTGAA
TCAAGTTTTTGGAACTTTTCCTGAGTTTTCCCATCTTCTATTTTTCTAGG
GATCCATTATTTTTGTAAAAAACCCTGAAGTATTTTTATTTATTTTCTTC
GTACTGTTCACTGTTCTAATCGCATGGATTATTTGTGCTGCTGCATTTGA
CAACATACAAGGTGGTTACGTCATAAACGTCAAACCGAGATACATCATTT
TTCTCATTATCGGTATCTTTTGCTGGATATGGGTCATTTTTGTCATTTTG
TTTAATATTTTGGGATGTTTCAATAAATGCATTTTCAATCGACTCACAAG
ATTGTTTGGTTGGGTAAGAATTTTGAGCACGTTGTTTTTGCCCCTTGGCT
TTTTATGAAATTACAGAGAAAAGTACTTCCCAAGAATACTACGCTACTTA
ACAGTACGTCTTTTGNTGTGGTTTTTTATGAAATTACAGAGAAAAGAACT
TCCCAAGAATACTACGCTACTTAACAGTACGTCTTTTGAACTACTAAAGT
TGGTCTAAAAAATAATCTGCGATGGAAACAAAAGCTGTAACTTTAAATGA
AATTCGAACTAAAAAAAGGTTTTTGTGCTTGTTGAAAAGATATTCACAAG
AGAAATGTTATCAAATACCATTAAAATTTCCAAATTTTGAAAAGATTCCG
CTTTAAAAAGGACTACAGCAACCTCGTACTTCTGGGACCTTATAATTCGT
ATTTCGTAAATATGCAACAAATATAATCATCCACTGATCTTTATAGTGGT
GTAATGCATCGAAAGCGCTAGATCTACTTTTGCTTAGATATAAGTGATGT
AGCGTAGTCTGTCGTTAGGAAAAGTTGTAACACTACAATGTCTTCTAGTT
ACGGGTACCACTTTCAAAGAAACGCCGATCAACATAAGATGGCAGATATA
GCTTGGGCCGGGGTTTACAGAAGTCAGTGATATCATCAAGGGCGTACCAA
GACTACTGACAACGAAGTGATTTGATGTGCATGCATTTTTTTTCAGCACA
TCTTTTTATTGGCGTATTCACTTAGTTGGTTGTTCTTTTGGATGTTTGGA
TCCATCTTGTTAGCTTGGCATCACAAATTCTGGAGTGGAAATATCGCAGC
ATCCGTAAGTTCTCTTTTGAAACAAAATATATTTATGAATCCTCTCATAG
TTTCTTGGATGGTTCAAGCCCCCTATATAATCAACCCCCCCNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNAGACTTTTTCAACCCCCCCCCCCTTACAGGGTTGTCTGA
GAATTTGAAGACCCCCCACCGCTAAACATAGGGGAAATGAAACTATGCCT
CTATGAGCTACGAGTCCAATTATTATATGCCGTTTTAGACTTTTGACTTT
GAATTGGATTGCTAATTTTGTGCTCGTTGGAAAGGAAAAATTACGAGAAG
GATATTATCATGTGAAAATCAAACGAGAAAAAAAATTAAATGAAACTATT
GATCAAAATTGAAAGTTGTTTGCATTTGTAATTTCACTGACAGTTAATTC
GAAAAAAAGTACCTTTGTCTGTATTAATTAACGTCGTGCAAGAGAAATCT
TTGTAGGACACTATAGATGGTAGATATAACAGTCTCTAAGGTCTACCATT
TGGTTCTCTTTTTTTTGCATCATATAACGAACAACGAGTGGTTTTTTGTA
CCACAGGATATTAAACGACACTAAAGCTTGTCCAAATACATCCAAGAACA
TTTCAACAACAAATTAAAATAAGAATGAGCCATCAGCAATGTTATTTCAT
GCAAAGAAAAGGCTTTACATCAACAAAACACAAAGTCTCAGAACTTGCTG
ACTCTGGCTGCCTTTTTGTTTATACTCTCTCCGAGAGTTCTGTTTCTAAG
AATCGCTTAAGTGTCTAAAGTACGCTTTGTATCTACAATTATAGTTATAT
TTAACAATTGTAATGTCTTAAGCGCTGTATTTGTTAGTTACATTCTGATA
GCGTAAGTATCTTATCCATTTATTCTTTTTGTCTTACAGATTTTTGGATT
CGTCAACTCCATTTTATTTTTCATCGATTCAATCATGTATTATCGAAGAT
GTCGAAAATATCGAGTTCAAATTCGAAAAATCCGTCGAGGTTTGATTGAG
AATGAGGAAGAGGAAATTTGAAAAATCTAAAGATGTATTGATTGCATTTG
TTTCAATATTTACGGAGCTGGTACAAATGGCAATAGCTTTTCCTGTAATG
GAGACAGTTAGTTTATGATTTATCTAGATCCTGACTGATTGTAGATGACA
ATAGATCTTATCGGAGTTTTTGATTTCTTCTAAAAAAGCGATGCATCGTG
GGATTGTTTCGGGAGTATTGCAATAGAACTCCCTCGAGGAATTCCTAAGA
GCTTTCTATTGTAATACCATCGAAACAATCCCACAATGCATCGCTTTTTT
AGAAAAATGAAAAACTCCGATAAGATCTATTAATCAGCACTCTTACCGTT
TTTCAGTTAAAACTTCGAGCTGTTCAACACCGCAAACCTCAAAAGGGTAG
ATACATAACATAAACTCGCTTACCCGTGCAACTGAGAAAGAGTTTAATTA
TCAACTTGTCCTTCCTTTATTAGCCCTGAATTACGCCTTTCCCGAGTCTA
TTATTATAGGGAATATTCCAAACATTAAAGGATGGGATCGTCCCTGATCT
ATTGACGGTAGGTGCAATATGGACAGAAAATAGACTTTAATTTACGGTGC
ATTTTCATAATATTTATCAGAAATTTGTCAGATTTTGCAACAAAAGAATT
CTCACTTATACTACGCCTTTACAGTGCACTTTCTTTCTAACGATCGTTAA
ATTGCACTTTGAGGAGCCTAAAAATGTACCCATAAAGCATTCCCTACTTT
TGAGTGCTCATCCGGGTCAATTACTCTGGAGTTATTACATCGATTGTTAT
TAATTTTAGTATTTTTATCACTTTTTGTAGGAAATAATATTTAAATTATA
TGTATACTGTATGTTGTAGTTTTTTGTATACTTTTTTGCACAATTTTAAT
ACCTTTTTGTTTTTACGTAATTTTTGTTACCACCGTGTATGATATTTAGA
GTTTTCATGCTTAGATATTTAGTATAATATTTAACTTTTTCTGTAGATAT
AATATAACAAATTACCAAATATGAAAAATTCAAATTTCTC

Coding sequence (CDS) from alignment at scaffold_89:217612..226351-

>TCONS_00073271 ID=TCONS_00073271|Name=TCONS_00073271|organism=Clytia hemisphaerica|type=CDS|length=2424bp|location=Sequence derived from alignment at scaffold_89:217612..226351- (Clytia hemisphaerica)
ATTTTTGGATTCGTCAACTCCATTTTATTTTTCATCGATTCAATCATGTA
TTATCGAAGATGTCGAAAATATCGAGTTCAAATTCGAAAAATCCGTCGAG
GTTTGATTGAGAATGAGGAAGAGGAAATTTGACACATCTTTTTATTGGCG
TATTCACTTAGTTGGTTGTTCTTTTGGATGTTTGGATCCATCTTGTTAGC
TTGGCATCACAAATTCTGGAGTGGAAATATCGCAGCATCCGGATCCATTA
TTTTTGTAAAAAACCCTGAAGTATTTTTATTTATTTTCTTCGTACTGTTC
ACTGTTCTAATCGCATGGATTATTTGTGCTGCTGCATTTGACAACATACA
AGGTGGTTACGTCATAAACGTCAAACCGAGATACATCATTTTTCTCATTA
TCGGTATCTTTTGCTGGATATGGGTCATTTTTGTCATTTTGTTTAATATT
TTGGGATGTTTCAATAAATGCATTTTCAATCGACTCACAAGATTGTTTGG
TTGGATGTCGAATGGTCAGGAGGAAAGGGATGGAAATGATAATTCATGTA
CACCAAACATAAGATTTATTTGTTCTTTTGAAGGCGTACTAAAGATCATA
GAATTTATTTTTGGATTCGTCAACTCCATTTTATTTTTCATCGATTCAAT
CATGTATTATCGAAGATGTCGAAAATATCGAGTTCAAATTCGAAAAATCC
GTCGAGGTTTGATTGAGAATGAGGAAGAGGAAATTTGACACATCTTTTTA
TTGGCGTATTCACTTAGTTGGTTGTTCTTTTGGATGTTTGGATCCATCTT
GTTAGCTTGGCATCACAAATTCTGGAGTGGAAATATCGCAGCATCCGGAT
CCATTATTTTTGTAAAAAACCCTGAAGTATTTTTATTTATTTTCTTCGTA
CTGTTCACTGTTCTAATCGCATGGATTATTTGTGCTGCTGCATTTGACAA
CATACAAGGTGGTTACGTCATAAACGTCAAACCGAGATACATCATTTTTC
TCATTATCGGTATCTTTTGCTGGATATGGGTCATTTTTGTCATTTTGTTT
AATATTTTGGGATGTTTCAATAAATGCATTTTCAATCGACTCACAAGATT
GTTTGGTTGGATGTCGAATGGTCAGGAGGAAAGGGATGGAAATGATAATT
CATGTACACCAAACATAAGATTTATTTGTTCTTTTGAAGGCGTACTAAAG
ATCATAGAATTTATTTTTGGATTCGTCAACTCCATTTTATTTTTCATCGA
TTCAATCATGTATTATCGAAGATGTCGAAAATATCGAGTTCAAATTCGAA
AAATCCGTCGAGGTTTGATTGAGAATGAGGAAGAGGAAATTTGACACATC
TTTTTATTGGCGTATTCACTTAGTTGGTTGTTCTTTTGGATGTTTGGATC
CATCTTGTTAGCTTGGCATCACAAATTCTGGAGTGGAAATATCGCAGCAT
CCGGATCCATTATTTTTGTAAAAAACCCTGAAGTATTTTTATTTATTTTC
TTCGTACTGTTCACTGTTCTAATCGCATGGATTATTTGTGCTGCTGCATT
TGACAACATACAAGGTGGTTACGTCATAAACGTCAAACCGAGATACATCA
TTTTTCTCATTATCGGTATCTTTTGCTGGATATGGGTCATTTTTGTCATT
TTGTTTAATATTTTGGGATGTTTCAATAAATGCATTTTCAATCGACTCAC
AAGATTGTTTGGTTGGATGTCGAATGGTCAGGAGGAAAGGGATGGAAATG
ATAATTCATGTACACCAAACATAAGATTTATTTGTTCTTTTGAAGGCGTA
CTAAAGATCATAGAATTTATTTTTGGATTCGTCAACTCCATTTTATTTTT
CATCGATTCAATCATGTATTATCGAAGATGTCGAAAATATCGAGTTCAAA
TTCGAAAAATCCGTCGAGGTTTGATTGAGAATGAGGAAGAGGAAATTTGA
CACATCTTTTTATTGGCGTATTCACTTAGTTGGTTGTTCTTTTGGATGTT
TGGATCCATCTTGTTAGCTTGGCATCACAAATTCTGGAGTGGAAATATCG
CAGCATCCGGATCCATTATTTTTGTAAAAAACCCTGAAGTATTTTTATTT
ATTTTCTTCGTACTGTTCACTGTTCTAATCGCATGGATTATTTGTGCTGC
TGCATTTGACAACATACAAGGTGGTTACGTCATAAACGTCAAACCGAGAT
ACATCATTTTTCTCATTATCGGTATCTTTTGCTGGATATGGGTCATTTTT
GTCATTTTGTTTAATATTTTGGGATGTTTCAATAAATGCATTTTCAATCG
ACTCACAAGATTGTTTGGTTGGATGTCGAATGGTCAGGAGGAAAGGGATG
GAAATGATAATTCATGTACACCAAACATAAGATTTATTTGTTCTTTTGAA
GGCGTACTAAAGATCATAGAATTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045455XLOC_045455Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073271-exon-scaffold_89-1575043694:226140..226351TCONS_00073271-exon-scaffold_89-1575043694:226140..226351Clytia hemisphaericaexon
TCONS_00073271-exon-scaffold_89-1575043694:221428..221532TCONS_00073271-exon-scaffold_89-1575043694:221428..221532Clytia hemisphaericaexon
TCONS_00073271-exon-scaffold_89-1575043694:220839..221102TCONS_00073271-exon-scaffold_89-1575043694:220839..221102Clytia hemisphaericaexon
TCONS_00073271-exon-scaffold_89-1575043694:220048..220155TCONS_00073271-exon-scaffold_89-1575043694:220048..220155Clytia hemisphaericaexon
TCONS_00073271-exon-scaffold_89-1575043694:217612..218762TCONS_00073271-exon-scaffold_89-1575043694:217612..218762Clytia hemisphaericaexon
TCONS_00073271-exon-scaffold_89-1510915933:226140..226351TCONS_00073271-exon-scaffold_89-1510915933:226140..226351Clytia hemisphaericaexon
TCONS_00073271-exon-scaffold_89-1510915933:221428..221532TCONS_00073271-exon-scaffold_89-1510915933:221428..221532Clytia hemisphaericaexon
TCONS_00073271-exon-scaffold_89-1510915933:220839..221102TCONS_00073271-exon-scaffold_89-1510915933:220839..221102Clytia hemisphaericaexon
TCONS_00073271-exon-scaffold_89-1510915933:220048..220155TCONS_00073271-exon-scaffold_89-1510915933:220048..220155Clytia hemisphaericaexon
TCONS_00073271-exon-scaffold_89-1510915933:217612..218762TCONS_00073271-exon-scaffold_89-1510915933:217612..218762Clytia hemisphaericaexon
TCONS_00073271-exon-scaffold_89-1491911889:226140..226351TCONS_00073271-exon-scaffold_89-1491911889:226140..226351Clytia hemisphaericaexon
TCONS_00073271-exon-scaffold_89-1491911889:221428..221532TCONS_00073271-exon-scaffold_89-1491911889:221428..221532Clytia hemisphaericaexon
TCONS_00073271-exon-scaffold_89-1491911889:220839..221102TCONS_00073271-exon-scaffold_89-1491911889:220839..221102Clytia hemisphaericaexon
TCONS_00073271-exon-scaffold_89-1491911889:220048..220155TCONS_00073271-exon-scaffold_89-1491911889:220048..220155Clytia hemisphaericaexon
TCONS_00073271-exon-scaffold_89-1491911889:217612..218762TCONS_00073271-exon-scaffold_89-1491911889:217612..218762Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073271-proteinTCONS_00073271-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_89supercontigscaffold_89:217612..226351 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.67198	3.63392	1.04701	0.772708	37.5766	24.7072	20.2621	21.1099	16.1002	14.7188	12.9919	10.0545	8.29274	6.00851	3.31893	3.79633	11.3648	13.4796	10.2509	12.7452	14.3043	13.0939	8.97653	9.8148	4.5379	7.1401	16.3655	11.7146	9.55079	9.28965
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR008253Marvel
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073271 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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