XLOC_045455 (gene) - C. hemisphaerica

Overview
NameXLOC_045455
Unique NameXLOC_045455
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_89:217612..226351-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045455 ID=XLOC_045455|Name=XLOC_045455|organism=Clytia hemisphaerica|type=gene|length=8740bp|location=Sequence derived from alignment at scaffold_89:217612..226351- (Clytia hemisphaerica)
TGACAGTTGAGCACTATCTTTTGATCGAGCTCCGATGTAGATCGAGTCAC
GATCGCCGTCGACCAAGCAAGGATGTAAACATTCTAGCCTCTCTGCGGAC
ACTTAAATGCCCACTATGTCTGATAGATAGATTCTGATAGAGTTCCAAAC
TGATTGTGAAGACGAGTGAGAAAACGAAAAAACTAAAAGTTTTGTTCATC
TGTTCATTATATGTAAGTATTTTTTGACTTTTCTATGACTTTTTACAGGG
CAATCCTTTTCAACCTTCGATCAGTGATCTATCAACTTGATGAGGTTGAA
CTTAAAGCCTGAGGAATTAGCTAGAGAGTGGAATCTTCAATATTTCCTAC
AGTAGATAGAGCAAGAATTATATACGCAAGAATAGCTAGTCTTTTCTGGG
AGATCGCCACAGTCTTTTGAACATACATACATTTTTAAACCAATTTCATT
TATCTTATTTTTGTTAATGCTTTTATATGTCTGTATGTAGGGAGAACAAA
CATTTATGTTGTTAACTACTGAAATATATAGATAGATACATTGGGTTAGC
CGAACCTAAGTTCAAGAAACGATACGCTAACCACAAGTCATCCTTCGCCA
ACGAAAAGTACGAAAAAGAAACTGAACTTTCCAAGGAGATTTGGAGGTTG
AAACGAAAGAATCGTGCCCCAAAGATTACTTGGAAGACAGTCCGTAAATG
TCCACCGTTCAATCGTGCTTCGCTGGAATGTTCACTCTGCCTTAGCGAAA
AATTAGAAATTGCCACATTCGACCAACCTGAGAAACTGTTAAATTCAAGG
AATGAACTGATCTCGAAATGTCGGCATGTGAATAAGTTCACCCTCAAACT
CCACGACACCAAAGACTGAAATGACGTNATGTAACTGAAAAATCAAAATC
TAAGTTCACTAAATCAAAAGTGAATTCCACTACAACTCCCCTAGGCAATA
AAATCTATTAAATCTTTATTGTAAGAGTTCTACTTTTATATTCATCTTTG
GTTTTCAGTTTTGGTTTTACTTTATTAATCCACAGTGCCTCAAGGGACAT
TAAGCATTGTTCAGATTTAATTGTGCGATCTAGAATCATTACATTTTCCA
TCAAAATTTCACAATTACAATTTTGAAAATGTCTTCCCACTGGAGTGTTT
ACGTTGCGGTGCTCTTTGATCCTGGTAATTAAGTGCCTGGCAGTCTGCCC
GACATAGCTCGATTCACACCGAGAACATTTAATAAACAAACCGCGTCATA
AAGTTGATTTGTTTTTTTCAACACATCGAATCTCCAATATTTTAATATCA
CCACAATTTTCCATATTTGATTGATATTCGATTGTGTTTGATTGAGGTTT
GCTTTTGTTTGATTGTCATTCTATCAGATTGTGGAAGTACTTTGATTTGT
GAAGTATCTTTACGTCACATAGAACAAAAGAAAATAGCAAAAGAACAAAG
GAATTACCAATAGCTACCATTATTTCGGAACCATGATATGGGGAATCGCG
ATTTTATGGAAATGGAAATCCTCATATCAAATAAAGCATCTTCTAAAAAA
TTTCATTCTTTCCCATAAATGGGAAAATGAAAAACAAAGAAACTTTGAGC
CTTTAAGACCAGGGGATGTCAATGGAACTGTTTGATTACCAAACTAATCA
AACTTAATCAAATTTAACAGTTGTTTTGGAGAACGCAACGTCCTATTATT
GAATAACAAATTACTTCACATACCTTAAAAGAAGAAATTTTGGCGGGAAT
TTAATTTGGCGGATGGCCAAAAAAGTTTTTTCAGAGGGAATTTAATTTGG
CGGATGGACGAAAAATCTAAATTTAGCGGGAATTTAATTTGGCGGTCGCT
TAAAAATTTAACCTTAAGATGGCGTCAAAACAGCAAAAAAATAGCGAAAA
CACCTTAAAAGAGATCATATTTTCAAAATGTTTAATTTGGCGGGAATTTA
ATTTGGCGGTTGGTGGAAAAAAGAAATTTTGGCAGGAACTTAATTTGGCA
GATTTCAGTCAAATCTGCCAAATCCGCCAAATTTTCTTTCAGCCAAAATT
TCTTCCTTTAAGGTACATAACTTTCCCTCAGCCAATAAAAATATGATAAA
TTATCTTGTCTTTAGGTAACTATTGTGGAGTAATTAGTTATTCAATAGGT
CATCGCGTTCTCCAAACAACTATCCAACAATAGGTGTTCAGTTACCAAAC
CAACTACTAGAACAGTAATCAAACCAAGAAATTTCGGTAAAGTTCAATGA
CTTGTTCGATTGATCTGTTAATTAAAGTTTGATAACTATTCGATTATAGT
TTGATAGGTCCGATTGTAATTTGATAGGTTTGATCATAGTTAGACATTCA
TTCAATAATAGGCAATTTTCGCAATATATTTGCTACTCTAGTATATAATA
CCTGAGAATAGCAGAATGATTACGGAAAAGAACCAAGATACTACTCGAAC
ACTCGTCGAACAACTCGAACATACACCGAACAACATCGAACTGTATTTTT
AATCTAACTAATCAATATATTTCCACGGTAAAGCTCTATTACTGTTCGAT
TTAGTTTGGTAATCAAATGTCCTATCCTTCAAATAAGTTCGATTGAGTTT
GATGGTTCGATTAATAAAATTGGTTCGATTGGGTTCGGTTGACATCCCCT
GGATAAAAAGAAGTTATAGTCTAAAAACCTGTAGTATTATCATGTATTGG
GATGTCCCAAAAAAACCATTACCCCCTGTGGACGACACCGTTTTTTGGAA
TTTTTTTTCACTTGGAAATCCTGAGAAATTTTGAAAAAGGTTCCAGAAAA
TGCAAGATTTTCCTAATTATTTGGTCATCCCTATCAGAAAATCTAAGATT
TTTCCTTAAAAATTCTTGAATGTTACAGAAATCCTGAAGTTTTTTAAAAG
TAAATTGTTTGAAATTGAAATCCATTTCCTCCACAGGGGGTAACAGATTA
TAACTGGAACCGCCCAATAAACATTATAATATTACACCATAAATCTAGAA
ATTTTAATATTTCTGAAATTTATTTTTCTTCAAAAAATTAAAACATTACA
GAATGTTTCACGCCAAATACGATCATCAGATGTATGAATAAAAAATTTGA
ACAAATTCTACTATGTAAAACATATTAGAAAGTAATTAACAGGCTATAAA
AGTCATTAAAAGTAATAAAATTTGAGTTGATTGGCTAAAGAAATATGAAT
GGTAAAAATTGTGTCTAGAGAAATAAAATGTATTGATAAGTGCATTGTAA
TTTAAATGTTAAAATTATCACACATCTGGGGGGGACTGTTTTGTAATTTT
TCAATATAGGAATTTATTTACGTGTTGGCATTTTGAAATCAATTCCGATT
TTGTGTTAACGAGCTCACGTTTAGAGGTGATTTATTTATTTAGCTCTACC
TTGGTATAGAGCACTTTGTCACCACAAACTACTGAAATTGTTGTTGAAAT
TTGAATATCTTGTAAAGTACAAAAGTTGTATCAATGTCAAATTTTGACCA
TAGATAGATATTAATGTAAAAAGAACTTTCCTTTCAAAATTTTTGAAATT
TTTTATAGCCAAAAATTGAACATGGCTAAAATATGATGTCATCATTAAAA
AAAAAAGAATTACAATTTATAGCGTCAAAATTTCATATTGAAATCACAAA
TAGTTTTAAGTTTGACGTAATGTTAGGTAGTAATCTTTATGATGTCGTAA
TATGTCACAATACAGGTTTTTGGGCTATAACTTCTTGTAGGCTAAAAATC
AATTTTTCTAACAGCTATGGAGAACATTATACTTCTTTCCAGCCGTGACA
TCATAATAACTTGGTCTTTTTTCAATAAATGCTTTAAAGGGGACGTCTGG
TCTGATTTTAGGTATTGTTTTTTTAGAATTTTTGGAAAAATTATTCCAGG
GAGATTAAAATGAGCTATCTCACTTCAAGAGATTTTTTTTCTATCACTTT
CTATGGCCATTTAAAAAATCCCTCTTTTTCAAAATTTATGACGTAGCTTA
TGTTATATGTTTTCTATGTTCTTTCAAGTAAACGAGATTAACTCCTCTTT
CTGTGCAGCTGGCATTTTTATAAGAAAATTTTAAGTAAGTCAGAGATGTG
CAAGATCATTTAAAGTCGTTAAAACATCTTTTTCCCAACATTTTGTCAAT
GAAAGCTTACTCCAACATCTTCATAGAAAACTGAAATATTTATATTGTTG
TGGACTGGAAAAATCATCGAAATTAGAAGTTTGAATTAAAATGTTCTTAT
CAAAAGTTGTTTAAATACAGTAATTTAGACTACAGACAAGATTTCTGTTC
TTATAAATTACGAACAAAGGTTACGTCAAAAATCAGGTAAAAGAGAGGAA
ATTGTAAAACACTAAAATCTGAATATGTCAGTCAAAACTAAAGATTTTGA
GTTCGTTTTTTCTGCAAAATTTTTTTTACTAATTTAGCTGTCTGGCATAG
AATTATGACTGAAATGATCTACCAAAGCAGACGTCCCCTTTAACACTGTT
CGTACTAGGGGGTTTCTGTTTGGAAGGGAAACTTTTATGCTAATAGCTCC
TGAAATGATAAAGCTTTGGACATGAAATTTTTACATAAGAATTTTCACAC
CTTGATATGATGATATTGCTGACATTATGTGTCATAGAAATTGATACAGG
TCTAATACAAAATAATTTTTATGTTAAATGTACATATTTATGTTCAAAAC
CATTATTTATTGAATATTTAGGATAAAATAAGGCTTTTGTACTGGGGAAC
CCTTTTCTACAGTAAGGCCTTTGTTTGTTCACACTCTGGAATATAACTAT
GATTTTTTCGGTTTTTTAGATAATGTCGAATGGTCAGGAGGAAAGGGATG
GAAATGATAATTCATGTACACCAAACATAAGATTTATTTGTTCTTTTGAA
GGCGTACTAAAGATCATAGAATTTGTAAGTGTTTAGAATTTTCAGCAGAG
CTTACTCTATCATAAACTAATGAAATGAAAAAAGTCAAACAGGGCCGCCT
ATAAAAACTGTGGAAAAGTTTTTGTAGATTAAGTGCCAGTTTGGTTTTCT
CTTATTTCAAATAGTGGCTGTTCCTCAACATTATCCAAACCTTTGTCATT
GTGGTGCGTTTGAATGTTTAGGTCAATATACAATAGAGGGGTAAATTGTG
TCTCATCACTATTCTTATTCCATCAAATAGAGGGTTAAAATATTATTGAA
TCAAGTTTTTGGAACTTTTCCTGAGTTTTCCCATCTTCTATTTTTCTAGG
GATCCATTATTTTTGTAAAAAACCCTGAAGTATTTTTATTTATTTTCTTC
GTACTGTTCACTGTTCTAATCGCATGGATTATTTGTGCTGCTGCATTTGA
CAACATACAAGGTGGTTACGTCATAAACGTCAAACCGAGATACATCATTT
TTCTCATTATCGGTATCTTTTGCTGGATATGGGTCATTTTTGTCATTTTG
TTTAATATTTTGGGATGTTTCAATAAATGCATTTTCAATCGACTCACAAG
ATTGTTTGGTTGGGTAAGAATTTTGAGCACGTTGTTTTTGCCCCTTGGCT
TTTTATGAAATTACAGAGAAAAGTACTTCCCAAGAATACTACGCTACTTA
ACAGTACGTCTTTTGNTGTGGTTTTTTATGAAATTACAGAGAAAAGAACT
TCCCAAGAATACTACGCTACTTAACAGTACGTCTTTTGAACTACTAAAGT
TGGTCTAAAAAATAATCTGCGATGGAAACAAAAGCTGTAACTTTAAATGA
AATTCGAACTAAAAAAAGGTTTTTGTGCTTGTTGAAAAGATATTCACAAG
AGAAATGTTATCAAATACCATTAAAATTTCCAAATTTTGAAAAGATTCCG
CTTTAAAAAGGACTACAGCAACCTCGTACTTCTGGGACCTTATAATTCGT
ATTTCGTAAATATGCAACAAATATAATCATCCACTGATCTTTATAGTGGT
GTAATGCATCGAAAGCGCTAGATCTACTTTTGCTTAGATATAAGTGATGT
AGCGTAGTCTGTCGTTAGGAAAAGTTGTAACACTACAATGTCTTCTAGTT
ACGGGTACCACTTTCAAAGAAACGCCGATCAACATAAGATGGCAGATATA
GCTTGGGCCGGGGTTTACAGAAGTCAGTGATATCATCAAGGGCGTACCAA
GACTACTGACAACGAAGTGATTTGATGTGCATGCATTTTTTTTCAGCACA
TCTTTTTATTGGCGTATTCACTTAGTTGGTTGTTCTTTTGGATGTTTGGA
TCCATCTTGTTAGCTTGGCATCACAAATTCTGGAGTGGAAATATCGCAGC
ATCCGTAAGTTCTCTTTTGAAACAAAATATATTTATGAATCCTCTCATAG
TTTCTTGGATGGTTCAAGCCCCCTATATAATCAACCCCCCCNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNAGACTTTTTCAACCCCCCCCCCCTTACAGGGTTGTCTGA
GAATTTGAAGACCCCCCACCGCTAAACATAGGGGAAATGAAACTATGCCT
CTATGAGCTACGAGTCCAATTATTATATGCCGTTTTAGACTTTTGACTTT
GAATTGGATTGCTAATTTTGTGCTCGTTGGAAAGGAAAAATTACGAGAAG
GATATTATCATGTGAAAATCAAACGAGAAAAAAAATTAAATGAAACTATT
GATCAAAATTGAAAGTTGTTTGCATTTGTAATTTCACTGACAGTTAATTC
GAAAAAAAGTACCTTTGTCTGTATTAATTAACGTCGTGCAAGAGAAATCT
TTGTAGGACACTATAGATGGTAGATATAACAGTCTCTAAGGTCTACCATT
TGGTTCTCTTTTTTTTGCATCATATAACGAACAACGAGTGGTTTTTTGTA
CCACAGGATATTAAACGACACTAAAGCTTGTCCAAATACATCCAAGAACA
TTTCAACAACAAATTAAAATAAGAATGAGCCATCAGCAATGTTATTTCAT
GCAAAGAAAAGGCTTTACATCAACAAAACACAAAGTCTCAGAACTTGCTG
ACTCTGGCTGCCTTTTTGTTTATACTCTCTCCGAGAGTTCTGTTTCTAAG
AATCGCTTAAGTGTCTAAAGTACGCTTTGTATCTACAATTATAGTTATAT
TTAACAATTGTAATGTCTTAAGCGCTGTATTTGTTAGTTACATTCTGATA
GCGTAAGTATCTTATCCATTTATTCTTTTTGTCTTACAGATTTTTGGATT
CGTCAACTCCATTTTATTTTTCATCGATTCAATCATGTATTATCGAAGAT
GTCGAAAATATCGAGTTCAAATTCGAAAAATCCGTCGAGGTTTGATTGAG
AATGAGGAAGAGGAAATTTGAAAAATCTAAAGATGTATTGATTGCATTTG
TTTCAATATTTACGGAGCTGGTACAAATGGCAATAGCTTTTCCTGTAATG
GAGACAGTTAGTTTATGATTTATCTAGATCCTGACTGATTGTAGATGACA
ATAGATCTTATCGGAGTTTTTGATTTCTTCTAAAAAAGCGATGCATCGTG
GGATTGTTTCGGGAGTATTGCAATAGAACTCCCTCGAGGAATTCCTAAGA
GCTTTCTATTGTAATACCATCGAAACAATCCCACAATGCATCGCTTTTTT
AGAAAAATGAAAAACTCCGATAAGATCTATTAATCAGCACTCTTACCGTT
TTTCAGTTAAAACTTCGAGCTGTTCAACACCGCAAACCTCAAAAGGGTAG
ATACATAACATAAACTCGCTTACCCGTGCAACTGAGAAAGAGTTTAATTA
TCAACTTGTCCTTCCTTTATTAGCCCTGAATTACGCCTTTCCCGAGTCTA
TTATTATAGGGAATATTCCAAACATTAAAGGATGGGATCGTCCCTGATCT
ATTGACGGTAGGTGCAATATGGACAGAAAATAGACTTTAATTTACGGTGC
ATTTTCATAATATTTATCAGAAATTTGTCAGATTTTGCAACAAAAGAATT
CTCACTTATACTACGCCTTTACAGTGCACTTTCTTTCTAACGATCGTTAA
ATTGCACTTTGAGGAGCCTAAAAATGTACCCATAAAGCATTCCCTACTTT
TGAGTGCTCATCCGGGTCAATTACTCTGGAGTTATTACATCGATTGTTAT
TAATTTTAGTATTTTTATCACTTTTTGTAGGAAATAATATTTAAATTATA
TGTATACTGTATGTTGTAGTTTTTTGTATACTTTTTTGCACAATTTTAAT
ACCTTTTTGTTTTTACGTAATTTTTGTTACCACCGTGTATGATATTTAGA
GTTTTCATGCTTAGATATTTAGTATAATATTTAACTTTTTCTGTAGATAT
AATATAACAAATTACCAAATATGAAAAATTCAAATTTCTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00073271TCONS_00073271Clytia hemisphaericatranscript
TCONS_00073270TCONS_00073270Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00073271-proteinTCONS_00073271-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_89supercontigscaffold_89:217612..226351 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.67	3.63	1.18	0.77	37.79	24.71	20.26	21.11	16.17	14.82	12.99	10.1	9.13	7.34	3.36	3.8	11.46	13.48	10.25	12.75	14.3	13.09	8.98	9.81	5.11	8.51	16.37	11.71	9.55	9.29